Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02669
- Subject:
- NR_103998.2
- Aligned Length:
- 2559
- Identities:
- 1503
- Gaps:
- 1056
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGACCCGGCCAACAGACTGGGGGTTAATTTAGCCAGAAAAGGGGGCGGGAAGGGCTGTAGGGTACTTGTCAAT 74
Query 1 --------ATGAACGTGGTTTTTGCTGTGAAGCAGTACATTTCCAAAATGATAGAGGACAGCGGGCCTGGTATG 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCGCCGCCATGAACGTGGTTTTTGCTGTGAAGCAGTACATTTCCAAAATGATAGAGGACAGCGGGCCTGGTATG 148
Query 67 AAAGTACTTCTCATGGATAAAGAGACGACTGGCATAGTGAGTATGGTATACACACAATCGGAGATTCTACAGAA 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAAGTACTTCTCATGGATAAAGAGACGACTGGCATAGTGAGTATGGTATACACACAATCGGAGATTCTACAGAA 222
Query 141 GGAAGTGTACCTCTTTGAACGCATTGATTCTCAAAATCGAGAGATCATGAAACACCTGAAGGCAATTTGTTTTC 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAAGTGTACCTCTTTGAACGCATTGATTCTCAAAATCGAGAGATCATGAAACACCTGAAGGCAATTTGTTTTC 296
Query 215 TTCGACCTACAAAGGAGAATGTGGATTATATTATTCAGGAGCTCCGAAGACCCAAATACACTATATATTTCATT 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTCGACCTACAAAGGAGAATGTGGATTATATTATTCAGGAGCTCCGAAGACCCAAATACACTATATATTTCATT 370
Query 289 TATTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGATGAACAGGAAGTTGTGGCTGA 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TATTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGATGAACAGGAAGTTGTGGCTGA 444
Query 363 GGTTCAGGAATTTTATGGTGATTACATTGCTGTGAACCCACATTTGTTTTCCCTCAATATTTTGGGTTGCTGCC 436
|||||
Sbjct 445 GGTTC--------------------------------------------------------------------- 449
Query 437 AGGGTCGAAATTGGGATCCAGCCCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCTCCTTTTATCTCTGAAG 510
Sbjct 450 -------------------------------------------------------------------------- 449
Query 511 AAGTGTCCCATGATTCGTTATCAGCTCTCATCAGAGGCAGCAAAGAGACTTGCAGAGTGCGTTAAGCAAGTGAT 584
||||||||||
Sbjct 450 ----------------------------------------------------------------AGCAAGTGAT 459
Query 585 AACTAAAGAATATGAACTGTTTGAATTCCGTCGGACAGAGGTTCCTCCATTGCTCCTTATTTTAGATCGCTGTG 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 460 AACTAAAGAATATGAACTGTTTGAATTCCGTCGGACAGAGGTTCCTCCATTGCTCCTTATTTTAGATCGCTGTG 533
Query 659 ATGATGCCATCACCCCATTGCTAAACCAGTGGACATATCAGGCCATGGTCCACGAACTACTAGGCATAAACAAC 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 ATGATGCCATCACCCCATTGCTAAACCAGTGGACATATCAGGCCATGGTCCACGAACTACTAGGCATAAACAAC 607
Query 733 AATCGGATTGATCTTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAGAAGTGGTCCTATCTGCTGAAAATGA 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 AATCGGATTGATCTTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAGAAGTGGTCCTATCTGCTGAAAATGA 681
Query 807 TGAATTCTATGCTAATAATATGTACCTGAACTTTGCTGAGATTGGTAGCAATATAAAGAATCTCATGGAAGATT 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 682 TGAATTCTATGCTAATAATATGTACCTGAACTTTGCTGAGATTGGTAGCAATATAAAGAATCTCATGGAAGATT 755
Query 881 TTCAGAAGAAGAAACCAAAAGAACAGCAAAAACTAGAATCAATAGCAGACATGAAGGCGTTTGTTGAGAATTAT 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 TTCAGAAGAAGAAACCAAAAGAACAGCAAAAACTAGAATCAATAGCAGACATGAAGGCGTTTGTTGAGAATTAT 829
Query 955 CCACAGTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAG 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 CCACAGTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAG 903
Query 1029 TGAACGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGTGCTCTCC 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 TGAACGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGTGCTCTCC 977
Query 1103 AGAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGATGCTGCCCGCCTGGTGATGCTTTATGCT 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 AGAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGATGCTGCCCGCCTGGTGATGCTTTATGCT 1051
Query 1177 TTACATTATGAGCGACACAGCAGCAATAGCCTGCCAGGACTAATGATGGACCTCAGGAATAAAGGTGTTTCTGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 TTACATTATGAGCGACACAGCAGCAATAGCCTGCCAGGACTAATGATGGACCTCAGGAATAAAGGTGTTTCTGA 1125
Query 1251 GAAGTATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGTGGTAAACGAGTCAGAGGAAGTGACCTCTTCAGCC 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1126 GAAGTATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGTGGTAAACGAGTCAGAGGAAGTGACCTCTTCAGCC 1199
Query 1325 CCAAAGATGCTGTGGCTATCACCAAACAATTCCTCAAAGGACTGAAGGGAGTAGAAAATGTATATACACAGCAT 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 CCAAAGATGCTGTGGCTATCACCAAACAATTCCTCAAAGGACTGAAGGGAGTAGAAAATGTATATACACAGCAT 1273
Query 1399 CAACCTTTCCTACATGAAACCCTGGATCATCTCATCAAAGGAAGGCTTAAGGAAAACCTATATCCTTATTTAGG 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 CAACCTTTCCTACATGAAACCCTGGATCATCTCATCAAAGGAAGGCTTAAGGAAAACCTATATCCTTATTTAGG 1347
Query 1473 CCCCAGCACACTCAGAGACAG----------------------------------------------------- 1493
|||||||||||||||||||||
Sbjct 1348 CCCCAGCACACTCAGAGACAGAATTGCCTCTTGTCTCTGATAAAGGCAAGCAACTTTTTCATTTGGTGAGGAAA 1421
Query 1494 -------------------------------------------------------------------------- 1493
Sbjct 1422 TGGAGCTATATGATCATGCATTCCAGAATCAGTCAATTCAAAAAGGAAGTACTTTTCATGTTTATACAAATGTA 1495
Query 1494 -------------------------------------------------------------------------- 1493
Sbjct 1496 GTAGAATCTTGTTGCTACAGCTTATTTTTTGTTTCTGTGAAGCAGCAGTCCTTTTTCATTGGCCTTTTTTCCTG 1569
Query 1494 ------------------------------ACCTCAGGATATCATTGTGTTTGTAATTGGAGGAGCCACCTATG 1537
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 CAGTAAATGCTCATAAGAACTGTACCATTTACCTCAGGATATCATTGTGTTTGTAATTGGAGGAGCCACCTATG 1643
Query 1538 AAGAGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAGTG 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1644 AAGAGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAGTG 1717
Query 1612 CACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAGT 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1718 CACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAGT 1791
Query 1686 CACATCAAGGTCAGCGAGCAGAAGA------------------------------------------------- 1710
|||||||||||||||||||||||||
Sbjct 1792 CACATCAAGGTCAGCGAGCAGAAGATGAAACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTGTCCCCACTA 1865
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 1866 CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTTGTTAGAACTCATCTCCA 1939
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 1940 GGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATC 2013
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2014 TCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACTTCAGTTACTGATGAATTTTGTTGG 2087
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2088 GATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGGGGCTTAAAAAGTAATCATTTGATGTACATACCACACT 2161
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2162 CCTTGGCTTCCTTTCTCTTCCCTTAACCCTTTCTGCTTTTCATTAACCACATTCCTGCACAACTCATTTCTGAA 2235
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2236 AACCTACCATGTTTCTTTACAGAGCCATCCAAAAATTTTTTGTCCCTACATAGCAATTTTCTGTGGCACTGAGA 2309
Query 1711 ------------------------------------------- 1710
Sbjct 2310 AACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGGATA 2352
