Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02731
- Subject:
- XM_017015988.1
- Aligned Length:
- 3730
- Identities:
- 2170
- Gaps:
- 1532
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGCTGCTGCTTCAGCAGAGAACTAAGTAGTGACAATGACAGTGAAAAAACTGGCCTGTTACAAAAATCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGAAAAGGAACCAGAAAACAAGATAAGTAAAACTTTGTCTTCATTATTTGATACCGTCAAAGGTGAGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCACCGTACTGGCAGTGGAGCCAGCAGTGTAGCTGGCGTTAGCGCGCGGACAAGGATTTTCGCAGGGTCTGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACAAACAGGGTCATAGACCCAAGCAGTCATTGAACCCTCTTTCCTCTTTTATATATACATTCTCAACAAGGTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAAAACTTGGGTGAGAATGACAAGAATTCAGATATTGTTGTTAATGAGCAGAATTCTGAGGGGGTCTGTGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACTGTGTGTGGGTAACGGCAGCCGACAAGGTTGTTGGGAAGATGAGGAGCTTTTCTCATGTGTGCTGGTGCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTGACCGAGGCCTGCAGGAGGAAGCCTTTGTGAGTGGCCATCTGCACTGTTACCCAGCTACTTGTAAAAACTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTAGTAGAGAAAGAAATGGTGGTCAGCGTTCACCTCAGCAGTGGTGATGAGAGTAAGTCTTTAGACCTATCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATAGGGAGAGGAAAGATGGAAACCCTGTTGGTATTGATGATCAGCAATGTCAGGATTCAGGAGAGTGCAAGTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGCATTTGTGTTGCCGACTCTGCCTGCCCAAGCGTGGCAGAGGAGCTGGGCACCTGGGTAGACACAGTAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCAAGAGGAGAGTGTTGCTCTTCAGTGCCTTCAGCCTCGCGTGCCATGTCAGGGGCGGGCGAGCCAGAGCCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCAGGAAGAACTCTCGCCTTGGGACACGCTGGGTCCAGGTGAAAGGACAGGGGAATGCAGTGGGAAAGCCAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTTGCCCTGAGCCTGTGGCGTTCAGCCATGCACCTTGTGAAGCAAACACTGATAACGTGCAGATGGAGGCTTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACAGGCAGAAGCTTGCACTGAATTCCCTAAAAATTACGCAGAAAGTAGTGCACTACATGGTATTGACCTACTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGAATTAAATAACAACATGGACAGTGACTCACTAAGTCATGCGTGTGTCCTGGGAGAAAGTGAGAGCTGTAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGGAGTAGGAAGTGAGATGGATCATCCACCTGGTGGCTTCCGTACTGACACTGCACATTCACCTGGTAGCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGTACTGACACTGCATGTGTTGCAGGGAGTGATGACCCGGAGGTGGTAACAGTTGTTGTCGACCAGAGTTTAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTCTAAAAAGGAGAGAGAAAATAACTCTATCACACCACTAAGAGACAACGATGATTTCTACTTGGACGTTAAC 1332
Query 1 ------------------------------------------------------------ATGACT-------- 6
||.|||
Sbjct 1333 AAAGCAGATAGTATCCTTCCTGTTGGTCTAGATAGAATTGATTTAAGTCCTAAGAGGCCTATCACTGCAGTAAG 1406
Query 7 ---------------TCTGATCAGG--ACGCTA------------------------AGGTTG--------TGG 31
||| .||||| |||||| ||.||| |||
Sbjct 1407 ATTTGGAAGTGGGTGTCT-CTCAGGTCACGCTAATTCAAGAGAAGCAGCCCCAAGCCAGCTTGATGACTGCTGG 1479
Query 32 ----CTGAA-----CCGCAGACGCAGAGAGTCCAGGAGGGCAAGGACAGCGCTCATCTGA--------TGAATG 88
|.||| ||.||||| .||| |||||.||| |||||||..|...|| ||.| |
Sbjct 1480 GAGCCGGAACCTGTCCCCAGAC-----AAGT-CAGGAAGGC----ACAGCGCAGAGGGGACTGCAGCCTGGA-G 1542
Query 89 GTCCTATATCTC----------------AAACCACTTCTCAG--ACAAGTTCC--------------------- 123
|.|..|..||.| |||.||||.||||| ||..||..|
Sbjct 1543 GCCAGAAGTCCCCTGCTGCCAGACAGAGAAAACACTCCTCAGCTACCGGTGTCAGAGGACGGTGTTGTTTGGGG 1616
Query 124 ATCCCACCTTTGA--------GTCAG---GTACCAGCAACTAAGGTTTCAGAGCTGAACCCTAATGCAGAAGTG 186
||..|| ||| |.||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 ATGGCA----TGATAGAGACGGACAGTTCGTACCAGCAACTAAGGTTTCAGAGCTGAACCCTAATGCAGAAGTG 1686
Query 187 TGGGGGGCTCCTGTGTTACATCTGGAAGCAAGCAGTGCTGCTGACGGTGTGAGTGCTGCATGGGAGGAGGTGGC 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 TGGGGGGCTCCTGTGTTACATCTGGAAGCAAGCAGTGCTGCTGACGGTGTGAGTGCTGCATGGGAGGAGGTGGC 1760
Query 261 TGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCG 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1761 TGGCCACCACGCAGACCGTGGCCCGCAGGGATCGGATGCCAATGGTGATGGTGACCAGGGCCATGAGAATGCCG 1834
Query 335 CATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTCGCTCTGGGTCCCTCAGAATATGACTCT 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1835 CATTGCCAGACCCGCAGGAGTCGGACCCAGCAGACATGAACGCTCTCGCTCTGGGTCCCTCAGAATATGACTCT 1908
Query 409 CTGCCTGAAAATAGCGAGACAGGAGGAAATGAGTCTCAACCAGACAGCCAGGAAGACCCCCGAGAAGTACTTAA 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1909 CTGCCTGAAAATAGCGAGACAGGAGGAAATGAGTCTCAACCAGACAGCCAGGAAGACCCCCGAGAAGTACTTAA 1982
Query 483 AAAAACATTGGAATTCTGCTTATCTAGGGAGAACCTTGCTAGTGACATGTATCTTATATCACAGATGGATAGTG 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1983 AAAAACATTGGAATTCTGCTTATCTAGGGAGAACCTTGCTAGTGACATGTATCTTATATCACAGATGGATAGTG 2056
Query 557 ACCAGTATGTGCCAATCACAACGGTGGCTAACCTCGACCACATCAAGAAGCTCAGCACTGATGTGGACTTGATT 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2057 ACCAGTATGTGCCAATCACAACGGTGGCTAACCTCGACCACATCAAGAAGCTCAGCACTGATGTGGACTTGATT 2130
Query 631 GTGGAAGTGCTAAGATCTTTACCTTTAGTCCAAGTGGATGAAAAGGGAGAAAAAGTAAGGCCAAATCAAAATCG 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2131 GTGGAAGTGCTAAGATCTTTACCTTTAGTCCAAGTGGATGAAAAGGGAGAAAAAGTAAGGCCAAATCAAAATCG 2204
Query 705 CTGCATAGTAATATTGCGTGAAATATCTGAATCTACCCCCGTGGAAGAAGTAGAAGCACTATTTAAAGGAGATA 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205 CTGCATAGTAATATTGCGTGAAATATCTGAATCTACCCCCGTGGAAGAAGTAGAAGCACTATTTAAAGGAGATA 2278
Query 779 ATTTACCAAAATTTATAAACTGTGAATTTGCATATAATGATAATTGGTTTATTACATTTGAAACAGAAGCTGAT 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279 ATTTACCAAAATTTATAAACTGTGAATTTGCATATAATGATAATTGGTTTATTACATTTGAAACAGAAGCTGAT 2352
Query 853 GCACAACAGGCTTACAAATACCTTCGAGAAGAAGTCAAAACTTTTCAAGGAAAACCAATTAAGGCACGGATAAA 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2353 GCACAACAGGCTTACAAATACCTTCGAGAAGAAGTCAAAACTTTTCAAGGAAAACCAATTAAGGCACGGATAAA 2426
Query 927 AGCAAAGGCAATAGCTATAAACACATTTTTGCCAAAGAATGGATTTAGACCCCTGGACGTGAGCCTGTATGCCC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2427 AGCAAAGGCAATAGCTATAAACACATTTTTGCCAAAGAATGGATTTAGACCCCTGGACGTGAGCCTGTATGCCC 2500
Query 1001 AGCAGCGCTACGCGACGTCGTTCTACTTCCCTCCCATGTACAGCCCCCAGCAGCAGTTCCCCCTGTACAGCCTG 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2501 AGCAGCGCTACGCGACGTCGTTCTACTTCCCTCCCATGTACAGCCCCCAGCAGCAGTTCCCCCTGTACAGCCTG 2574
Query 1075 ATCACTCCCCAGACGTGGTCAGCAACGCACAGCTATCTTGACCCACCCTTGGTAACTCCATTTCCAAATACTGG 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2575 ATCACTCCCCAGACGTGGTCAGCAACGCACAGCTATCTTGACCCACCCTTGGTAACTCCATTTCCAAATACTGG 2648
Query 1149 ATTTATAAATGGGTTTACGTCTCCAGCGTTCAAGCCTGCGGCGTCTCCTCTGACTTCTCTCAGACAGTATCCTC 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2649 ATTTATAAATGGGTTTACGTCTCCAGCGTTCAAGCCTGCGGCGTCTCCTCTGACTTCTCTCAGACAGTATCCTC 2722
Query 1223 CTCGAAGCAGGAATCCTAGTAAATCTCATCTGCGGCATGCGATTCCTAGTGCAGAGAGGGGACCTGGGTTATTA 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2723 CTCGAAGCAGGAATCCTAGTAAATCTCATCTGCGGCATGCGATTCCTAGTGCAGAGAGGGGACCTGGGTTATTA 2796
Query 1297 GAAAGTCCTTCAATATTTAACTTCACTGCAGATCGATTAATTAATGGTGTCCGGAGTCCACAAACAAGGCAAGC 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2797 GAAAGTCCTTCAATATTTAACTTCACTGCAGATCGATTAATTAATGGTGTCCGGAGTCCACAAACAAGGCAAGC 2870
Query 1371 AGGTCAAACTAGAACACGGATTCAAAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGCCTGGGCGTGTGGAGC 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2871 AGGTCAAACTAGAACACGGATTCAAAACCCTTCAGCATATGCCAAGAGAGAGGCTGGGCCTGGGCGTGTGGAGC 2944
Query 1445 CAGGCAGTCTCGAATCCTCTCCTGGTTTAGGGAGGGGAAGGAAGAATTCCTTTGGCTACCGGAAGAAAAGGGAG 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2945 CAGGCAGTCTCGAATCCTCTCCTGGTTTAGGGAGGGGAAGGAAGAATTCCTTTGGCTACCGGAAGAAAAGGGAG 3018
Query 1519 GAGAAGTTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCT 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3019 GAGAAGTTTACAAGCAGCCAGACACAGTCTCCAACGCCACCAAAGCCTCCGTCGCCAAGCTTCGAGCTGGGGCT 3092
Query 1593 GTCCAGCTTCCCTCCATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGGACTTGTTTGAAAACAGGCTATCTA 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3093 GTCCAGCTTCCCTCCATTACCTGGAGCTGCCGGCAATTTGAAGACAGAGGACTTGTTTGAAAACAGGCTATCTA 3166
Query 1667 GCTTGATAATAGGACCATCCAAAGAAAGGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTC 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3167 GCTTGATAATAGGACCATCCAAAGAAAGGACCCTCAGTGCAGACGCAAGCGTGAACACCCTTCCTGTAGTGGTC 3240
Query 1741 TCCAGAGAGCCCTCGGTGCCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCCCCTCCCCAGCTCATTT 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3241 TCCAGAGAGCCCTCGGTGCCGGCTTCTTGTGCTGTATCAGCAACGTACGAGCGATCCCCCTCCCCAGCTCATTT 3314
Query 1815 ACCCGATGATCCCAAGGTGGCGGAGAAACAGAGGGAAACCCACAGTGTGGACAGACTTCCTTCCGCCCTCACTG 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3315 ACCCGATGATCCCAAGGTGGCGGAGAAACAGAGGGAAACCCACAGTGTGGACAGACTTCCTTCCGCCCTCACTG 3388
Query 1889 CGACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGCCACGGAATTGCGAAAGCCCAGCTACGCAGAGATTTGT 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3389 CGACCGCGTGTAAATCGGTGCAGGTGAACGGAGCCGCCACGGAATTGCGAAAGCCCAGCTACGCAGAGATTTGT 3462
Query 1963 CAGAGAACGAGTAAAGAGCCTCCTTCTTCCCCATTGCAACCCCAAAAAGAACAAAAGCCAAACACTGTTGGTTG 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3463 CAGAGAACGAGTAAAGAGCCTCCTTCTTCCCCATTGCAACCCCAAAAAGAACAAAAGCCAAACACTGTTGGTTG 3536
Query 2037 TGGGAAGGAGGAAAAGAAGCTGGCAGAGCCCGCAGAGAGATACCGGGAGCCCCCAGCCCTCAAGTCCACACCTG 2110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3537 TGGGAAGGAGGAAAAGAAGCTGGCAGAGCCCGCAGAGAGATACCGGGAGCCCCCAGCCCTCAAGTCCACACCTG 3610
Query 2111 GAGCCCCCAGAGACCAGAGGCGGCCGGCGGGGGGCCGGCCCTCGCCCTCGGCCATGGGGAAGCGTCTCAGCCGA 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3611 GAGCCCCCAGAGACCAGAGGCGGCCGGCGGGGGGCCGGCCCTCGCCCTCGGCCATGGGGAAGCGTCTCAGCCGA 3684
Query 2185 GAGCAGAGCACTCCCCCCAAGTCTCCTCAG 2214
||||||||||||||||||||||||||||||
Sbjct 3685 GAGCAGAGCACTCCCCCCAAGTCTCCTCAG 3714
