Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02740
Subject:
NM_001353927.2
Aligned Length:
1548
Identities:
1353
Gaps:
195

Alignment

Query    1  ATGACGTTGCTGATCACTGGAGATTCCATCGTTAGTGCTGAGGCAGTATGGGATCACGTCACCATGGCCAACCG  74
                                                                           |||||||||||
Sbjct    1  ---------------------------------------------------------------ATGGCCAACCG  11

Query   75  GGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   12  GGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGA  85

Query  149  TCGACGATGAGGAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAGGAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   86  TCGACGATGAGGAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAGGAG  159

Query  223  GGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTACAGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  160  GGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTACAGAA  233

Query  297  CCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAGCACCTCAAGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  234  CCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAGCACCTCAAGG  307

Query  371  ATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  308  ATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATC  381

Query  445  TTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  382  TTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGA  455

Query  519  TGACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATATACTCTGAGTATT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  456  TGACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATATACTCTGAGTATT  529

Query  593  GTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTTTGAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  530  GTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTTTGAG  603

Query  667  GCCTGTCGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  604  GCCTGTCGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTG  677

Query  741  CAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  678  CAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAG  751

Query  815  CTGCTTTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACAAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  752  CTGCTTTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACAAG  825

Query  889  ATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATCTA  962
            ||||||||||||||||||||||||||||||||||                                        
Sbjct  826  ATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGG----------------------------------------  859

Query  963  CACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACC  1036
                                                                                      
Sbjct  860  --------------------------------------------------------------------------  859

Query 1037  AGATGGTCCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAA  1110
                              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  860  ------------------AGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAA  915

Query 1111  TATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  916  TATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCA  989

Query 1185  CAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  990  CAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTT  1063

Query 1259  TCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1064  TCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAG  1137

Query 1333  GCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138  GCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCC  1211

Query 1407  ACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1212  ACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGT  1285

Query 1481  TCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTTCAAAAAA  1548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1286  TCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTTCAAAAAA  1353

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