Nucleotide Global Alignment

Description

• Query: ccsbBroad304_02740
• Subject: XM_017029380.2
• Aligned Length: 1550
• Identities: 913
• Gaps: 637

Alignment

Query    1  ATGACGTTGCTGATCACTGGAGATTCCATCGTTAGTGCTGAGGCAGTATGGGATCACGTCACCATGGCCAACCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCGACGATGAGGAGGGATG--GTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAGG  220
                            |||  |||                  ||||||||||||||||||||||||||||||||
Sbjct    1  ----------------ATGACGTT------------------GCTCTGGGTGAACCAGGAGGATGAGGTGGAGG  40

Query  221  AGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTACAG  294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   41  AGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTACAG  114

Query  295  AACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAGCACCTCAA  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  115  AACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAGCACCTCAA  188

Query  369  GGATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAA  442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  189  GGATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAA  262

Query  443  TCTTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAAT  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  263  TCTTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAAT  336

Query  517  GATGACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATATACTCTGAGTA  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  337  GATGACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATATACTCTGAGTA  410

Query  591  TTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTTTG  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  411  TTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTTTG  484

Query  665  AGGCCTGTCGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATC  738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  485  AGGCCTGTCGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATC  558

Query  739  TGCAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGC  812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  559  TGCAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGC  632

Query  813  AGCTGCTTTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACA  886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  633  AGCTGCTTTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACA  706

Query  887  AGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATC  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  707  AGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATC  780

Query  961  TACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCA  1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  781  TACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCA  854

Query 1035  CCAGATGGTCCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATA  1108
            |||||||||||||||||||||                                                     
Sbjct  855  CCAGATGGTCCTCTGCAAGAA-----------------------------------------------------  875

Query 1109  AATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTT  1182
                                                                                      
Sbjct  876  --------------------------------------------------------------------------  875

Query 1183  CACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGC  1256
                                                                                      
Sbjct  876  --------------------------------------------------------------------------  875

Query 1257  TTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGC  1330
                                                       |||||||||||||||||||||||||||||||
Sbjct  876  -------------------------------------------GGCTTTGAAATTTCTGAAAACCAGAAGAGGC  906

Query 1331  AGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTAC  1404
            |||||||||                                                                 
Sbjct  907  AGGCTGCAA-----------------------------------------------------------------  915

Query 1405  CCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGA  1478
                                                                                      
Sbjct  916  --------------------------------------------------------------------------  915

Query 1479  GTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTTCAAAAAA  1548
                                                                                  
Sbjct  916  ----------------------------------------------------------------------  915