Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02742
- Subject:
- NM_144531.3
- Aligned Length:
- 2342
- Identities:
- 891
- Gaps:
- 1366
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAATTGAGCGGCGGAGGCGGCGGCCCCGGCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCGGGAGCTGCGACCAGCGCCTCGGCAGCAGCGGTGACGGTGGCTGACTCGGCAGTGGCGACCATGGAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATCAGCACGGAGCTCAAGTGCTCCTGCGGGAGGAAGTGGTCCAGCTTCAAGAGGAAGTGCACCTTCTCCGGCA 296
Query 1 -ATGAAGGAGATGTTGGCGAAGGACCTGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCG 73
||||||||.|||.||||||||||||||||||||||.|||||||||||||.|||||||||||||||.|||||.|
Sbjct 297 GATGAAGGAAATGCTGGCGAAGGACCTGGAGGAGTCACAGGGCGGCAAGTGCTCTGAGGTCCTCTCAGCCACTG 370
Query 74 AGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCT 147
|||||.||||.|||||||..||||||||||||||.||.|||||||||||||||||||||||.||||||||||||
Sbjct 371 AGCTCCGGGTGCAGCTGGTACAGAAGGAGCAGGAACTGGCCAGAGCCAAAGAAGCCTTGCAAGCCATGAAAGCT 444
Query 148 GATCGGAAGCGCTTAAAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAG 221
||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||
Sbjct 445 GACCGGAAGCGCTTAAAGGGCGAGAAGACTGACCTGGTGAGCCAGATGCAGCAGCTGTACGCCACGCTGGAGAG 518
Query 222 CCGCGAGGAGCAGCTCCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAG 295
|||||||||||||.|.|||||||||||||||||||||||||||||||||||||||||.||.||.||.|||||||
Sbjct 519 CCGCGAGGAGCAGTTGCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGTGAAGACGCAGTCAAAG 592
Query 296 CGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTGAGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGAC 369
|.|||||||||||||||||||||||||||||.||||||||||||||.||.||.||.||||||||.|||||||||
Sbjct 593 CACTGGCCAAGGAGAAGGACCTGCTGGAGCGAGAGAAGTGGGAGCTTCGACGGCAGGCCAAGGAAGCCACAGAC 666
Query 370 CACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCAT 443
||.||..||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||||
Sbjct 667 CATGCTGCGGCCCTGCGCTCCCAGCTGGACCTCAAGGACAACCGCATGAAGGAGCTGGAGGCGGAGCTCGCCAT 740
Query 444 GGCCAAACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGG 517
||||||.|||||||||||.||.|||||||||||.|||||||||.|||||||||||||||||||.||.|||||||
Sbjct 741 GGCCAAGCAGTCCTTAGCCACTCTGACCAAGGATGTCCCCAAGAGGCATTCCCTCGCCATGCCCGGTGAGACGG 814
Query 518 TGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAG 591
|||||||||||||||||||.||||||||||||||.||||||||.|||||.||.|||||||||||.||.||||||
Sbjct 815 TGCTCAATGGCAACCAGGAATGGGTGGTGCAGGCTGACCTCCCACTGACTGCTGCCATCCGGCAAAGCCAACAG 888
Query 592 ACTCTCTACCACTCACACCCCCCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCA 665
||||||||||||||||||||.||.||||||||.||||||||| |||||||||||||||||||||||..|.||
Sbjct 889 ACTCTCTACCACTCACACCCTCCCCACCCTGCAGACCGGCAA---GTCAGGGTGAGCCCCTGCCACTCAAGACA 959
Query 666 GCCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTC 739
||||||.||||||||.||.||.|||||.||.|||||.||||||||.||.|||||.|||||||||||||||||..
Sbjct 960 GCCCTCCGTCATCTCTGATGCTTCTGCTGCTGAAGGTGACCGGTCATCTACACCAAGCGACATCAACTCCCCAA 1033
Query 740 GACACCGGACACACTCCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTA 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||||
Sbjct 1034 GACACCGGACACACTCCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAGCCTACACAACCCTATTGTA 1107
Query 814 CAGTCACTAGAGGATCTTGAAGACCAAAAACGGAAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCG 887
||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 1108 CAGTCACTAGAGGATCTTGAAGACCAAAAACGGAAAAAGAAGAAGGAGAAGATGGGATTCGGCTCCATCTCTCG 1181
Query 888 CGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATG-------------GTACCGCC 948
.||||||||||||||||||||.|||||||||||||||||.||||||||||||| ||.|.|||
Sbjct 1182 AGTCTTCGCCAGAGGGAAGCAACGGAAGTCCCTCGACCCGGGCCTCTTTGATGACTCCGACAGCCAGTGCAGCC 1255
Query 949 -------------------CCTGATTATTACATAGAGG------------------AGGACGCGGA-CTGG--- 981
|||| |.|.|...||||| ||.|||.||| ||||
Sbjct 1256 CCACACGCCACAGCCTCAGCCTG--TCTGAGGGAGAGGAGCAGATGGACCGTCTGCAGCACGTGGAGCTGGTGA 1327
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1328 GGACCACGCCCATGTCGCACTGGAAGGCTGGCACAGTGCAGGCCTGGCTGGAGGTGGTGATGGCCATGCCCATG 1401
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1402 TACGTCAAGGCCTGTGCAGAAAATGTCAAGAGTGGGAAGGTGCTTCTCAGCCTGAGTGACGAGGACCTGGAGTT 1475
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1476 GGGCCTGGGAGTGTGCAGCTCCTTGCACAGGCGCAAGCTCCGCCTGGCCATTGAGGACTACCGAGATGCTGAGG 1549
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1550 CAGGCCGCAGCCTGTCCAAAGCTGCCGACCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGC 1623
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1624 CTGTCCCAGTATTCCCAGGCCTTCCAGAACCACCTGGTTGATGGGAGGATGCTGAATTCACTGATGAAGCGGGA 1697
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1698 CCTGGAGAAACACCTGAACGTGTCCAAGAAGTTCCACCAAGTTAGCATCTTGCTGGGAATTGAGCTGCTGTACC 1771
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1772 AAGTGAACTTCAGCAGGGAGGCTCTCCAGGAGCGCAGAGCCCGCTGTGAAACACAGAACACAGACCCTGTGGTC 1845
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1846 TGGACCAACCAGCGGGTGCTCAAGTGGGTGCGCGATATCGACCTGAAGGAGTATGCAGACAACCTGACCAATAG 1919
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1920 CGGTGTCCATGGTGCTGTGCTGGTCCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACCGCCCTGGGCATCC 1993
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1994 CCAGCGGGAAGCACATACTCAGGAGACACCTGGCAGAGGAGATGAGCACCATCTTCCATCCATCCAACTCCACA 2067
Query 982 -------------------------------------------------------------------------- 981
Sbjct 2068 GGCATCCGGGAGTCTGAGCGCTTTGGGACACCACCTGGCAGGGCCTCTAGCATCACCAGAGCTGGGAGAGAGGA 2141
Query 982 -------------------------------------------------------------------------- 981
Sbjct 2142 CAGTGGGGGCAATAGCAAGCACAGAGCTGGCCGGCTGCCCCTGGGGAAGATAGGAAGGGGCTTCAGCAGCAAAG 2215
Query 982 -------------------------------------------------------------------------- 981
Sbjct 2216 AGCCCGATTTCCATGATGACTATGGCTCTCTGGAGAACGAGGACTGTGGGGATGAGGACCTCCAAGGCAGGCCG 2289
Query 982 ------------------------------------------------ 981
Sbjct 2290 GAACAGTGCCGTCTGGAGGGATACGGCAGCTTGGAGGTCACCAATGTG 2337
