Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02742
- Subject:
- NM_201628.3
- Aligned Length:
- 2334
- Identities:
- 967
- Gaps:
- 1362
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAACTGAGCGGCGGCGGCGGCCCCGGCCCGGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGGAGCCGCGGCCAGCGCCTCGGCGGCGGGGGACTCGGCGGCGACGAACATGGAGAACCCCCAGCTTGGAGCG 222
Query 1 ------------------------------------------------------------ATGAAGGAGATGTT 14
||||||||||||||
Sbjct 223 CAAGTGCTCCTGCGGGAAGAAGTGTCGCGGCTCCAGGAGGAAGTTCACCTTCTCCGGCAGATGAAGGAGATGTT 296
Query 15 GGCGAAGGACCTGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGC 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCGAAGGACCTGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGC 370
Query 89 TGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGATCGGAAGCGCTTA 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGATCGGAAGCGCTTA 444
Query 163 AAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCT 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCT 518
Query 237 CCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGA 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGA 592
Query 311 AGGACCTGCTGGAGCGTGAGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTG 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGACCTGCTGGAGCGTGAGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTG 666
Query 385 CGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCTT 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCTT 740
Query 459 AGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACC 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACC 814
Query 533 AGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCA 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCA 888
Query 607 CACCCCCCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTC 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CACCCCCCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTC 962
Query 681 CGACGCATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACT 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGACGCATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACT 1036
Query 755 CCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGAT 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGAT 1110
Query 829 CTTGAAGACCAAAAACGGAAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGG 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTTGAAGACCAAAAACGGAAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGG 1184
Query 903 GAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATG-------------GTACCGCCCCTGATTATTAC--- 960
|||||||||||||||||||||||||||||||||||||| ||.|.||||| ||
Sbjct 1185 GAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGACTCGGACAGCCAGTGCAGCCCC--------ACGCG 1250
Query 961 ATAGAG-------------------GAGGACGC----GGACTGG------------------------------ 981
..|||| ||||| || ||||.||
Sbjct 1251 GCAGAGCCTCAGCCTGTCGGAAGGCGAGGA-GCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAGGACCACC 1323
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1324 CCTATGTCCCACTGGAAGGCGGGCACCGTCCAGGCCTGGCTGGAGGTGGTGATGGCCATGCCTATGTACGTCAA 1397
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1398 GGCCTGCACGGAGAACGTGAAGAGCGGGAAGGTGCTGCTGAGCCTGAGTGACGAGGACCTGCAGCTGGGCCTTG 1471
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1472 GGGTGTGCAGCTCCCTGCACCGGCGCAAGCTGCGCCTGGCCATCGAGGACTACCGTGATGCCGAGGCAGGCCGC 1545
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1546 AGCCTGTCCAAAGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCTGTCCCA 1619
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1620 GTACTCCCAGGCCTTTCAGAACCACCTGGTTGATGGGCGGATGCTGAATTCCCTGATGAAGCGAGACCTGGAGA 1693
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1694 AGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAAC 1767
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1768 TTCAGCAGGGAGGCCCTCCAGGAGCGCCGGGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAA 1841
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1842 CCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCC 1915
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1916 ATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGG 1989
Query 982 -------------------------------------------------------------------------- 981
Sbjct 1990 AAGCACATCCTCCGGAGACACCTGGCAGAGGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGCATCCG 2063
Query 982 -------------------------------------------------------------------------- 981
Sbjct 2064 GGAGGCTGAGCGTTTTGGAACGCCCCCTGGCAGGGCCTCCAGCGTCACGCGGGCAGGAAAGGAGGAGAACAGCA 2137
Query 982 -------------------------------------------------------------------------- 981
Sbjct 2138 GCGGTCTCAAGTACAAGGCTGGCCGGCTGCCCCTGGGGAAGATAGGAAGGGGCTTCAGCAGCAAAGATCCCGAT 2211
Query 982 -------------------------------------------------------------------------- 981
Sbjct 2212 TTCCATGATGACTATGGCTCTCTTCAAAACGAAGATTGCGGAGACGATGACCCCCAGAGCAGGCTGGAACAGTG 2285
Query 982 ---------------------------------------- 981
Sbjct 2286 CCGTCTGGAAGGCTACAACAGCCTGGAGGTCACCAACGTG 2325
