Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02745
- Subject:
- XM_017014550.1
- Aligned Length:
- 3686
- Identities:
- 1960
- Gaps:
- 1708
Alignment
Query 1 ATGAGCAAGTTAAAAGTGATACCAGAAAAAAGCCTTACCAATAATTCTAGGATCGTAGGACTCCTGGCTCAACT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCAAGTTAAAAGTGATACCAGAAAAAAGCCTTACCAATAATTCTAGGATCGTAGGACTCCTGGCTCAACT 74
Query 75 GGAGAAGATCAATGCTGAGCCTTCAGAATCAGACACTGCCCGATATGTTACATCAAAAATTCTTCATCTGGCTC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAGAAGATCAATGCTGAGCCTTCAGAATCAGACACTGCCCGATATGTTACATCAAAAATTCTTCATCTGGCTC 148
Query 149 AGAGTCAAGAAAAAACAAGGAGAGAAATGACAGCCAAAGGTTCTACAGGAATGGAAATTCTGCTGTCAACATTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGAGTCAAGAAAAAACAAGGAGAGAAATGACAGCCAAAGGTTCTACAGGAATGGAAATTCTGCTGTCAACATTA 222
Query 223 GAGAACACAAAAGATCTTCAAACTACACTTAATATCTTAAGCATTCTTGTTGAGCTGGTGTCAGCTGGTGGAGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGAACACAAAAGATCTTCAAACTACACTTAATATCTTAAGCATTCTTGTTGAGCTGGTGTCAGCTGGTGGAGG 296
Query 297 TCGAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCACAAATATTGTTGCAGTTACTTATGAATGCCAGCAAAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCGAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCACAAATATTGTTGCAGTTACTTATGAATGCCAGCAAAG 370
Query 371 AATCTCCCCCACATGAGGACTTAATGGTACAGATTCATTCTATTCTTGCAAAGATTGGACCAAAAGATAAAAAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AATCTCCCCCACATGAGGACTTAATGGTACAGATTCATTCTATTCTTGCAAAGATTGGACCAAAAGATAAAAAA 444
Query 445 TTTGGAGTAAAGGCTAGAATTAATGGGGCTCTGAATATAACCCTGAATTTGGTCAAGCAGAATTTGCAGAATCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTTGGAGTAAAGGCTAGAATTAATGGGGCTCTGAATATAACCCTGAATTTGGTCAAGCAGAATTTGCAGAATCA 518
Query 519 TCGCTTGGTTCTACCTTGCCTTCAGCTTTTACGAGTATATTCTGCCAACTCTGTGAATTCAGTATCCTTAGGGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGCTTGGTTCTACCTTGCCTTCAGCTTTTACGAGTATATTCTGCCAACTCTGTGAATTCAGTATCCTTAGGGA 592
Query 593 AAAATGGAGTTGTGGAACTGATGTTTAAAATCATTGGACCATTTAGTAAGAAGAATTCCAGTCTTATAAAGGTT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAAATGGAGTTGTGGAACTGATGTTTAAAATCATTGGACCATTTAGTAAGAAGAATTCCAGTCTTATAAAGGTT 666
Query 667 GCTTTAGACACTCTTGCTGCATTGCTAAAATCAAAAACAAATGCCAGGAGAGCTGTAGACAGAGGATATGTCCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTTTAGACACTCTTGCTGCATTGCTAAAATCAAAAACAAATGCCAGGAGAGCTGTAGACAGAGGATATGTCCA 740
Query 741 AGTGCTTTTAACAATTTATGTAGATTGGCACCGCCATGATAACCGGCATAGAAACATGCTCATTCGGAAAGGAA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGTGCTTTTAACAATTTATGTAGATTGGCACCGCCATGATAACCGGCATAGAAACATGCTCATTCGGAAAGGAA 814
Query 815 TTTTACAGAGTTTAAAAAGTGTTACAAACATCAAGTTGGGAAGAAAAGCATTTATTGATGCCAATGGGATGAAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTTTACAGAGTTTAAAAAGTGTTACAAACATCAAGTTGGGAAGAAAAGCATTTATTGATGCCAATGGGATGAAA 888
Query 889 ATTCTGTATAATACTTCGCAA----------------------------------------------------- 909
|||||||||||||||||||||
Sbjct 889 ATTCTGTATAATACTTCGCAAGAATGTCTGGCAGTCAGGACTCTGGATCCTCTTGTCAATACCTCCAGTCTGAT 962
Query 910 -------------------------------------------------------------------TTGCCTG 916
|||||||
Sbjct 963 AATGAGGAAGTGTTTCCCAAAAAATCGACTGCCACTCCCAACAATTAAAAGTTCTTTTCATTTCCAGTTGCCTG 1036
Query 917 TTATTCCTGTGACTGGTCCTGTGGCTCAGCTCTACAGCTTACCTCCTGAAGTGGATGACGTAGTAGATGAAAGT 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTATTCCTGTGACTGGTCCTGTGGCTCAGCTCTACAGCTTACCTCCTGAAGTGGATGACGTAGTAGATGAAAGT 1110
Query 991 GATGACAACGATGATATTGATGTAGAAGCTGAAAACGAAACTGAGAATGAAGATGACCTAGATCAAAATTTTAA 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GATGACAACGATGATATTGATGTAGAAGCTGAAAACGAAACTGAGAATGAAGATGACCTAGATCAAAATTTTAA 1184
Query 1065 GAATGATGATATTGAAACAGATATTAACAAACTAAAACCCCAGCAAGAACCGGGACGAACAATAGAAGATCTAA 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAATGATGATATTGAAACAGATATTAACAAACTAAAACCCCAGCAAGAACCGGGACGAACAATAGAAGATCTAA 1258
Query 1139 AAATGTATGAACACCTTTTCCCTGAGCTTGTTGATGATTTTCAGGACTATGATTTAATCTCCAAAGAACCAAAG 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAATGTATGAACACCTTTTCCCTGAGCTTGTTGATGATTTTCAGGACTATGATTTAATCTCCAAAGAACCAAAG 1332
Query 1213 CCTTTTGTATTTGAGGGAAAAGTACGTGGTCCTATTGTTGTTCCTACGGCAGGCGAGGAAACATCTGGGAATTC 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCTTTTGTATTTGAGGGAAAAGTACGTGGTCCTATTGTTGTTCCTACGGCAGGCGAGGAAACATCTGGGAATTC 1406
Query 1287 TGGCAATTTAAGAAAAGTTGTAATGAAGGAGAACATATCTTCTAAAGGAGATGAAGGTGAAAAGAAGTCTACCT 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGCAATTTAAGAAAAGTTGTAATGAAGGAGAACATATCTTCTAAAGGAGATGAAGGTGAAAAGAAGTCTACCT 1480
Query 1361 TTATGGATCTAGCAAAAGAAGATATTAAAGATAATGATAGAACATTACAACAGCAGCCAGGTGATCAAAATAGA 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTATGGATCTAGCAAAAGAAGATATTAAAGATAATGATAGAACATTACAACAGCAGCCAGGTGATCAAAATAGA 1554
Query 1435 ACTATTTCATCAGTCCATGGTTTAAACAATGATATTGTAAAGGCCTTGGACCGAATTACATTGCAGAATATTCC 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACTATTTCATCAGTCCATGGTTTAAACAATGATATTGTAAAGGCCTTGGACCGAATTACATTGCAGAATATTCC 1628
Query 1509 TTCTCAAACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGACTGCAGTCTTCCTCTTACTGTCCTTACCTGTG 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTCTCAAACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGACTGCAGTCTTCCTCTTACTGTCCTTACCTGTG 1702
Query 1583 CTAAAGCATGTCCACACATGGCTACTTGTGGAAATGTTCTGTTTGAGGGAAGAACAGTTCAGCTAGGGAAGCTT 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTAAAGCATGTCCACACATGGCTACTTGTGGAAATGTTCTGTTTGAGGGAAGAACAGTTCAGCTAGGGAAGCTT 1776
Query 1657 TGCTGCACTGGAGTTGAAACTGAAGATGATGAAGATACTGAGTCAAATTCATCGGTAGAACAAGCATCGGTTGA 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TGCTGCACTGGAGTTGAAACTGAAGATGATGAAGATACTGAGTCAAATTCATCGGTAGAACAAGCATCGGTTGA 1850
Query 1731 AGTACCTGATGGACCAACACTCCATGACCCAGACCTCTATATTGAGATTGTGAAAAATACGAAGTCTGTCCCAG 1804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGTACCTGATGGACCAACACTCCATGACCCAGACCTCTATATTGAGATTGTGAAAAATACGAAGTCTGTCCCAG 1924
Query 1805 AATATTCAGAGGTGGCTTATCCCGATTATTTTGGTCACATTCCGCCTCCATTCAAAGAGCCTATTTTAGAAAGG 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AATATTCAGAGGTGGCTTATCCCGATTATTTTGGTCACATTCCGCCTCCATTCAAAGAGCCTATTTTAGAAAGG 1998
Query 1879 CCTTATGGTGTACAAAGGACAAAAATTG-----CTCAAGATATTGAAAGGCTAATACATCAGAGTGATATCATA 1947
|||||||||||||||||| || || |.|.|| ||.|.|
Sbjct 1999 CCTTATGGTGTACAAAGG--------TGTTTCCCT-------------------TCCCTC-------TACCTT- 2037
Query 1948 GATCGTGTGGTATATGACTTGGATAACCCAAATTACACCATTCCAGAAGAG-GGAGATATTTTGAAATTTAACT 2020
|| ||| |..||||| ||.||||| |||||.||| ||
Sbjct 2038 --TC-------------CTT------------TCCCACCA---CAAAAGAGAGGAGAGATT-----------CT 2070
Query 2021 CCAAATTTG-AGTCTGGGAATCTGCGCAAAGTAATT-CAAATTAGAAAAAATGAATATGATCTTATTCTGAACT 2092
.|.||..|| ||.||| .|||| .|||| ||..||||.
Sbjct 2071 ACGAACATGCAGACTG----ACTGC------CAATTGCATTTTAGC---------------------------- 2106
Query 2093 CAGACATAAACAGCAATCATTATCATCAGTGGTTTTACTTTGAAGTCAGTGGAATGCGACCAGGTGTTGCTTAC 2166
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2167 AGGTTTAACATCATTAACTGTGAAAAGTCCAACAGTCAGTTTAATTATGGTATGCAACCACTCATGTATTCGGT 2240
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2241 TCAGGAAGCATTAAATGCCAGACCATGGTGGATTCGTATGGGGACTGACATTTGTTACTATAAAAATCATTTCT 2314
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2315 CAAGAAGTTCAGTTGCTGCAGGTGGGCAAAAGGGAAAATCCTACTATACAATTACATTTACTGTCAATTTTCCA 2388
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2389 CATAAAGATGATGTTTGCTACTTTGCTTATCACTATCCATATACGTATTCAACTTTACAGATGCATCTTCAAAA 2462
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2463 ATTGGAATCAGCACACAATCCTCAGCAAATCTATTTTCGGAAAGATGTGTTATGTGAAACCCTGTCTGGAAACA 2536
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2537 GCTGCCCCTTGGTGACTATAACAGCAATGCCAGAGTCTAATTATTATGAACATATCTGCCATTTCAGAAATCGC 2610
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2611 CCTTACGTTTTCTTGTCTGCTCGGGTACATCCTGGAGAAACTAATGCAAGTTGGGTTATGAAAGGAACGTTGGA 2684
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2685 ATATCTCATGAGCAATAACCCCACTGCTCAGAGCTTACGAGAATCTTATATTTTTAAAATTGTCCCTATGTTAA 2758
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2759 ATCCAGATGGTGTCATCAATGGAAATCATCGCTGTTCTTTAAGTGGAGAGGATTTGAATAGGCAGTGGCAAAGT 2832
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2833 CCAAGTCCGGATTTACATCCTACAATTTACCATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGTGAAGCGTTT 2906
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2907 ACCCTTGGTTTATTGTGATTATCATGGCCATTCCCGAAAGAAGAATGTATTTATGTATGGTTGCAGCATCAAAG 2980
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 2981 AGACAGTGTGGCATACCAATGATAATGCAACTTCATGTGATGTTGTGGAGGATACGGGATACAGGACATTGCCT 3054
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 3055 AAGATACTGAGCCATATCGCCCCAGCATTTTGCATGAGCAGCTGTAGCTTCGTAGTGGAAAAATCTAAAGAATC 3128
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 3129 CACAGCACGTGTTGTAGTTTGGAGGGAAATAGGAGTACAAAGAAGTTATACCATGGAGAGTACTTTATGTGGCT 3202
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 3203 GTGATCAGGGAAAATACAAGGGTTTACAGATTGGTACCCGAGAACTGGAAGAGATGGGAGCAAAATTTTGTGTT 3276
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 3277 GGTCTTTTACGTTTGAAAAGACTGACCTCTCCATTGGAGTATAATCTGCCTTCCAGCCTGCTTGACTTTGAAAA 3350
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 3351 TGATTTAATTGAATCAAGCTGCAAAGTAACTAGCCCTACCACTTATGTCTTGGATGAAGATGAACCTCGATTCC 3424
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 3425 TTGAAGAAGTTGATTACAGTGCAGAAAGTAATGATGAGTTAGATATTGAGTTGGCTGAAAATGTAGGAGATTAT 3498
Sbjct 2107 -------------------------------------------------------------------------- 2106
Query 3499 GAACCTTCTGCTCAAGAAGAAGTACTTTCTGACTCTGAATTATCAAGAACATACCTACCT 3558
Sbjct 2107 ------------------------------------------------------------ 2106