Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02765
- Subject:
- XM_006498553.2
- Aligned Length:
- 3444
- Identities:
- 1652
- Gaps:
- 1590
Alignment
Query 1 ATGAGCGACATAGTGGAGAAGACGCTGACGGCGCTGCCGGGACTCTTTCTGCAGAACCAGCCCGGT-GGTGGGC 73
|||||||||||.|||||||.|||||||||.||.||||||||.|||||.||||||||||||| | ||.||.|
Sbjct 1 ATGAGCGACATGGTGGAGAGGACGCTGACCGCACTGCCGGGGCTCTTCCTGCAGAACCAGC----TGGGAGGAC 70
Query 74 CCGCGGCCGCCAAGGCGTCCTTCTCCTCGAGGCTGGGCAGCCTTGTCCGCGGCATCACAGCCCTCACCTCCAAG 147
|.||||||.|||..||..||||||.|||.|||||||||.||||..||||.|||.||||.||.|||.|.||||||
Sbjct 71 CTGCGGCCTCCAGAGCACCCTTCTTCTCCAGGCTGGGCGGCCTCATCCGTGGCGTCACTGCACTCTCATCCAAG 144
Query 148 CACGAAGAAGAAAAATTAATCCAGCAGGAACTGAGTAGTCTGAAAGCGACTGTTTCTGCTCCTACTACAACACT 221
|||||||||||.||||||||||||||||||||||||||||||||.||.||||||||||||||.||.||.|||||
Sbjct 145 CACGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGACCACGACACT 218
Query 222 GAAAATGATGAAGGAATGTATGGTGAGACTTATATATTGTGAAATGCTTGGATATGATGCTTCCTTTGGCTATA 295
|||||.||||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||.|||||.||||
Sbjct 219 GAAAACGATGAAGGAATGTATGGTGAGACTTATATACTGTGAGATGCTTGGATACGATGCTTCTTTTGGTTATA 292
Query 296 TTCATGCAATCAAGTTAGCCCAACAAGGAAACCTCTTAGAAAAAAGAGTAGGTTATTTGGCTGTTTCCTTATTT 369
|.||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||
Sbjct 293 TACATGCAATCAAGTTGGCCCAACAAGGAAACCTCTTAGAAAAAAGAGTGGGTTATTTGGCTGTTTCTTTATTT 366
Query 370 CTACATGAAAGTCATGAATTATTGCTTCTCCTTGTGAATACAGTTGTAA------------------------- 418
||||||||||||||||||.|.|||||||||||||||||||||||.||||
Sbjct 367 CTACATGAAAGTCATGAACTTTTGCTTCTCCTTGTGAATACAGTGGTAAAGACTGTCTTCTTTGCTTGCTTATG 440
Query 419 --AGGATCTGCAGAGCACTAACCTAGTAGAAGTGTGTATGGCACTGACTGTTGTTAGCCAGATTTTCCCCTGCG 490
||||.||||||||||||||.||.||||||||.|||||||||||.||||||||.||||||||||||||..|.|
Sbjct 441 GCAGGACCTGCAGAGCACTAATCTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGCCAGATTTTCCCTCGAG 514
Query 491 AAATGATTCCAGCTGTTCTTCCATTAATAGAAGATAAACTTCAACATTCTAAGGAGATTGTACGAAGAAAAGCT 564
|||||||||||||.|||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||.
Sbjct 515 AAATGATTCCAGCCGTTCTTCCACTAATAGAAGATAAACTTCAACATTCTAAGGAGATTATACGAAGAAAAGCA 588
Query 565 GTTCTGGCATTATACAAATTCCATCTCATTGCTCCTAATCAAGTACAACATATTCATATTAAGTTTCGGAAAGC 638
||||||||||||||||||||..|.||||||||.||.|||||||||||.||.||.||.|.|||.|||||||||||
Sbjct 589 GTTCTGGCATTATACAAATTTTACCTCATTGCCCCCAATCAAGTACAGCACATCCACACTAAATTTCGGAAAGC 662
Query 639 ACTTTGTGACAGAGATGTTGGGGTCATGGCTGCCTCCTTGCATATATATCTTAGAATGATTAAGGAGAATTCAT 712
.|||||||||||||||||||||||||||||||||||.|||||.|||||.|||||.|||||||||||.|||.|.|
Sbjct 663 GCTTTGTGACAGAGATGTTGGGGTCATGGCTGCCTCTTTGCACATATACCTTAGGATGATTAAGGAAAATGCTT 736
Query 713 CTGGATATAAAGACTTGACTGGGAGTTTTGTAACCATTTTGAAGCAAGTAGTTGGAGGAAAGCTCCCAGTAGAA 786
||||.||||||||||||||.|.||||||||||||.|||||.|||||.||.||.||.||.||||||||.|||||.
Sbjct 737 CTGGCTATAAAGACTTGACGGAGAGTTTTGTAACAATTTTAAAGCAGGTGGTGGGCGGGAAGCTCCCGGTAGAG 810
Query 787 TTCAATTACCACAGTGTGCCAGCACCATGGTTACAAATTCAGCTCTTGAGAATACTGGGACTTCTAGGAAAAGA 860
||||.|||||||||.||||||||||||||||||||.|||||||||.||||||||||||||||.||.||.|||||
Sbjct 811 TTCAGTTACCACAGCGTGCCAGCACCATGGTTACAGATTCAGCTCCTGAGAATACTGGGACTGCTGGGGAAAGA 884
Query 861 TGATCAAAGGACAAGTGAATTAATGTATGATGTTCTTGATGAATCCTTACGAAGAGCTGAGTTAAATCACAATG 934
.|||.||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 885 CGATGAAAGGACAAGTGAATTAATGTATGATGTTCTTGATGAATCCTTACGAAGAGCCGAGTTAAATCACAATG 958
Query 935 TCACATATGCTATTTTGTTTGAATGTGTGCATACAGTCTATTCTATTTATCCTAAATCGGAATTACTTGAGAAG 1008
||||.||.||||||.|||||||||||||.||.|||.|||||||||||||||||||.||.|||||||||||||||
Sbjct 959 TCACTTACGCTATTCTGTTTGAATGTGTACACACAATCTATTCTATTTATCCTAAGTCAGAATTACTTGAGAAG 1032
Query 1009 GCTGCCAAGTGCATTGGAAAATTTGTTCTGTCACCTAAAATAAATCTAAAATATTTAGGACTGAAGGCTCTTAC 1082
||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||
Sbjct 1033 GCTGCCAAGTGCATTGGAAAATTTGTTCTGTCACCTAAAATAAACCTCAAATATTTAGGACTGAAGGCTCTTAC 1106
Query 1083 CTATGTTATCCAACAGGATCCTACTCTGGCTCTTCAACACCAGATGACAATAATTGAATGTTTAGATCATCCTG 1156
||||||||||||.|||||||||.||||||||||||||||||||||.||.|||||||||||..||||.||.||||
Sbjct 1107 CTATGTTATCCAGCAGGATCCTTCTCTGGCTCTTCAACACCAGATAACCATAATTGAATGCCTAGACCACCCTG 1180
Query 1157 ATCCCATTATTAAAAGAGAGACTCTGGAACTTCTTTACAGAATTACTAATGCACAGAATATAACAGTTATTGTC 1230
||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||...||||||||.
Sbjct 1181 ATCCCATTATTAAAAGAGAGACTCTGGAACTTCTTTACAGAATTACAAATGCACAGAATGTAGTGGTTATTGTA 1254
Query 1231 CAGAAAATGCTTGAATATTTACATCAGAGCAAAGAAGAGTATGTCATCGTCAATTTGGTCGGCAAAATAGCAGA 1304
|||||||||||||||||.|||||||||||||||||||||.||.|||||.|||.|||.||.||||.|||.||.||
Sbjct 1255 CAGAAAATGCTTGAATACTTACATCAGAGCAAAGAAGAGCATATCATCATCAGTTTAGTTGGCAGAATTGCTGA 1328
Query 1305 GCTGGCTGAGAAATATGCTCCTGATAATGCATGGTTTATTCAGACAATGAATGCTGTGTTTTCAGTAGGAGGAG 1378
||||||||||||||||||||||||.||.|..|||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1329 GCTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATTCAGACAATGAATGCTGTGTTTTCAGTGGGAGGAG 1402
Query 1379 ATGTAATGCATCCTGATATTCCCAATAACTTTCTGAGACTACTAGCGGAAGGTTTTGATGATGAAACAGAAGAT 1452
|||||||||||||.|||||||.||..|||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 1403 ATGTAATGCATCCAGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAACAGAAGAT 1476
Query 1453 CAGCAATTAAGACTCTATGCAGTTCAGTCTTATCTCACTTTACTGGATATGGAAAATGTGTTCTATCCACAGAG 1526
||.||||||||||||||.|||||||||||||||||.||||||||.||||||||||||...||||||||||||||
Sbjct 1477 CAACAATTAAGACTCTACGCAGTTCAGTCTTATCTTACTTTACTAGATATGGAAAATACTTTCTATCCACAGAG 1550
Query 1527 ATTTCTTCAAGTTATGAGTTGGGTATTAGGGGAATATTCCTACCTCTTAGATAAGGAAACGCCAGAGGAAGTTA 1600
||||||||||||||||||||||||.|||||.||.||.|||||||||||||||||.||||..||||||||.||||
Sbjct 1551 ATTTCTTCAAGTTATGAGTTGGGTGTTAGGAGAGTACTCCTACCTCTTAGATAAAGAAAGTCCAGAGGAGGTTA 1624
Query 1601 TAGCTAAGCTCTACAAGTTACTTATGAATGACTCTGTGTCTTCAGAAACAAAAGCCTGGTTAATTGCTGCTGTG 1674
||.|.|.||||||||||||||||||||.||||||..|.|||||||||||.|||||.|||||..|||||||.||.
Sbjct 1625 TAACCAGGCTCTACAAGTTACTTATGAGTGACTCCATTTCTTCAGAAACGAAAGCATGGTTGTTTGCTGCGGTA 1698
Query 1675 ACCAAATTGACATCTCAGGCGCACTCTTCTAATAC----AGTTGAGAGATTAATCCATGAATTTACCATATCTT 1744
|||||.||||||.||||.||.||.|||||| | ||||||||.|||||||||.|||||.||..||||.|
Sbjct 1699 ACCAAGTTGACACCTCAAGCTCATTCTTCT----CCCTTAGTTGAGAAATTAATCCAAGAATTCACTGTATCCT 1768
Query 1745 TGGATACTTGTATGAGACAACATGCATTTGAATTAAAACATTTGCATGAGAATGTGGAACTTATGAAGAGCTTG 1818
||.||||||||.|||||||.||||||||||||||.||||||.|||||||.|||...||.||||||||||||.||
Sbjct 1769 TGAATACTTGTCTGAGACAGCATGCATTTGAATTGAAACATCTGCATGAAAATACAGAGCTTATGAAGAGCCTG 1842
Query 1819 CTTCCAGTTG-ACAGGAGTTGTGAAGACTTGGTGGTAGATGCTTCTTTATCTTTTCTGGATGGTTTTGTGGCTG 1891
||||..|.|| .|| ||.||||||||||.|.|||| |.||| |||| ||
Sbjct 1843 CTTCAGGGTGCTCA-GAATTGTGAAGACATAGTGG-----GTTTC---------TCTG--TG------------ 1887
Query 1892 AAGGACTCAGTCAGGGTGCAGCGCCTTACAAACCTCCCCATCAACGCCAGGAGGAAAAGCTTTCTCAGGAAAAA 1965
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 1966 GTTCTCAATTTTGAACCATATGGACTCTCCTTTTCTTCATCTGGCTTCACTGGACGACAGTCTCCTGCTGGCAT 2039
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2040 TTCTCTTGGTTCAGATGTATCTGGGAATAGTGCTGAGACAGGACTGAAAGAGACAAATAGCTTGAAGCTGGAAG 2113
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2114 GTATAAAGAAATTGTGGGGGAAAGAAGGCTATCTTCCCAAGAAGGAAAGCAAAACTGGTGATGAAAGTGGAGCT 2187
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2188 CTGCCTGTTCCTCAAGAGAGTATAATGGAGAATGTAGATCAAGCTATAACTAAAAAGGATCAATCTCAAGTTCT 2261
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2262 TACCCAATCTAAAGAGGAGAAAGAAAAGCAGCTGCTGGCATCATCATTATTTGTTGGTCTAGGATCAGAAAGTA 2335
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2336 CAATCAACCTGCTGGGAAAAGCAGATACTGTCTCTCACAAGTTCAGAAGGAAATCAAAAGTCAAAGAAGCTAAA 2409
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2410 AGTGGCGAAACAACCAGTACTCATAATATGACCTGTTCTTCCTTTAGTTCTTTGTCAAATGTGGCATATGAAGA 2483
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2484 TGATTATTATTCGAATACTTTGCACGATACAGGAGACAAGGAATTAAAGAAATTTTCTCTCACTTCAGAACTTT 2557
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2558 TGGATTCTGAGTCACTCACAGAACTGCCCTTGGTTGAGAAATTCTCATATTGTAGTCTGTCTACACCTTCATTG 2631
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2632 TTTGCTAATAACAACATGGAAATTTTTCACCCTCCTCAATCTACTGCAGCCTCAGTTGCCAAGGAAAGCTCTTT 2705
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2706 AGCTTCATCTTTTTTGGAAGAAACTACTGAATACATACACTCAAATGCTATGGAAGTCTGTAATAATGAAACTA 2779
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2780 TATCAGTGTCTTCTTATAAAATTTGGAAAGATGATTGTTTATTGATGGTCTGGTCAGTCACTAATAAGAGTGGT 2853
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2854 TTGGAATTGAAAAGTGCTGACTTAGAAATTTTTCCTGCAGAAAATTTCAAGGTGACTGAGCAACCTGGATGCTG 2927
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 2928 TTTGCCTGTAATGGAAGCAGAAAGCACCAAAAGCTTTCAATATAGTGTGCAGATAGAAAAACCTTTTACAGAAG 3001
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 3002 GAAATCTTACTGGTTTTATTAGTTATCATATGATGGATACTCATTCTGCTCAGCTGGAATTTTCTGTAAACTTA 3075
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 3076 TCACTATTAGATTTCATTAGACCATTAAAAATCTCAAGTGACGACTTTGGGAAACTCTGGTTATCCTTCGCAAA 3149
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 3150 TGATGTGAAACAAAATGTAAAAATGTCAGAATCTCAAGCTGCACTTCCTTCTGCACTAAAGACTCTGCAACAGA 3223
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 3224 AACTAAGACTCCATATTATTGAGATTATAGGCAATGAAGGGCTATTGGCCTGTCAGCTGCTCCCATCCATCCCC 3297
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 3298 TGCTTACTGCATTGCCGAGTTCATGCAGATGTATTAGCCCTGTGGTTCAGATCCTCCTGTTCTACTCTTCCTGA 3371
Sbjct 1888 -------------------------------------------------------------------------- 1887
Query 3372 CTATTTACTGTATCAGTGTCAAAAGGTGATGGAGGGATCC 3411
Sbjct 1888 ---------------------------------------- 1887
