Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02878
- Subject:
- XR_940403.1
- Aligned Length:
- 1898
- Identities:
- 943
- Gaps:
- 955
Alignment
Query 1 ----------------------------------------ATGGCTGCGCCCTGCGCGGAGGACCCCTCGCTGG 34
||||||||||||||||||||||||||||||||||
Sbjct 1 AACGGCCACCGCAGCTGCCTTCGGCGCCGCCAGCCCCGCCATGGCTGCGCCCTGCGCGGAGGACCCCTCGCTGG 74
Query 35 AAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGT 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGT 148
Query 109 GGCTCCATGGACTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTCACTGGCCACAA 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGCTCCATGGACTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTCACTGGCCACAA 222
Query 183 GGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCC 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGATGCCGTCACCTGTGTGAACTTCTCTCCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCC 296
Query 257 GCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCAC 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGTGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCAC 370
Query 331 TTCTGCAGTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCA 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCTGCAGTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCA 444
Query 405 GAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCA 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGGGCGGCTCA 518
Query 479 TCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGT 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGT 592
Query 553 GAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAA 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGCATGGCGGCTTTGTCACCTATGTGGACTTCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAA 666
Query 627 CACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCATTATCAGTTGCACAGTGCAGCAGTGAACG 700
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCATTATCAGT--------------------- 719
Query 701 GGCTCTCTTTCCACCCGTCGGGAAACTACCTGATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTGGACCTG 774
Sbjct 720 -------------------------------------------------------------------------- 719
Query 775 ATGGAGGGCCGGCTGCTCTACACACTCCACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAAGAACGGG 848
|||||||||||||||||||||||||||||||||||
Sbjct 720 ---------------------------------------GGACCAGCCACCACTGTTGCCTTTTCAAGAACGGG 754
Query 849 GGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAGAGTAACTTTGATATTGTTGATCATG 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 GGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAGAGTAACTTTGATATTGTTGATCATG 828
Query 923 GAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCTGCCAGAAGTGGACTTC 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 GAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCT---------------- 886
Query 997 CCTGTCCCCCCAGGCAGAGGCAGGAGTGTGGAGTCTGTGCAGAGCCAGCCCCAGGAGCCCGTGAGTGTGCCCCA 1070
Sbjct 887 -------------------------------------------------------------------------- 886
Query 1071 GACACTGACTAGCACGCTGGAGCACATTGTGGGCCAGCTGGATGTCCTCACTCAGACAGTCTCCATTCTGGAGC 1144
||||||||||||||||||||
Sbjct 887 ------------------------------------------------------GACAGTCTCCATTCTGGAGC 906
Query 1145 AGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAGCAACA 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 AGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAGCAACA 980
Query 1219 CCA----------------------------------------------------------------------- 1221
|||
Sbjct 981 CCATGATCAGGGGAGCAGGAATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGAC 1054
Query 1222 -------------------------------------------------------------------------- 1221
Sbjct 1055 TTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCC 1128
Query 1222 -------------------------------------------------------------------------- 1221
Sbjct 1129 CTCCACCTTGCTATCTGCACCAGGAGGCTCTCCACCTGGCAGCCAGAGGTCCCCAGTGGGCCGGGCTCACACAC 1202
Query 1222 -------------------------------------------------------------------------- 1221
Sbjct 1203 AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC 1276
Query 1222 -------------------------------------------------------------------------- 1221
Sbjct 1277 CTTCGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCATT 1350
Query 1222 -------------------------------------------------------------------------- 1221
Sbjct 1351 TGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGG 1424
Query 1222 -------------------------------------------------------------------------- 1221
Sbjct 1425 GTTTTCTCTAAATCTGACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTCTCAA 1498
Query 1222 -------------------------------------------------------------------------- 1221
Sbjct 1499 GTGGGTGGTGGCTTTTCAGTGGCCCTGATTTCTGTTCCACACGTGTTCACTGGAGCCAGGTGACTTCCTCCTTG 1572
Query 1222 ------------------------------------------------ 1221
Sbjct 1573 CGTGAGTGAGGGCACAGGAATCTCAAAATTAAACCTGACTTCATTGCA 1620
