Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02888
- Subject:
- NR_130760.2
- Aligned Length:
- 1596
- Identities:
- 541
- Gaps:
- 1005
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTGCCTGAGTTCGCCAGTGGTCCAGGAGCCGCTTTTTTCCACTCGGGAAGACTTCAGAGAAGTCTCACAAAGG 74
Query 1 --------------------------------------ATGCTCGTCCTCAGAAGCGCCCTGACTCGGGCGCTG 36
||||||||.||||||||||.||||||...||||||.
Sbjct 75 ACTCGGCTGGCTGCTTTTCTCAGTGCCGAAGCCGCGCCATGCTCGTTCTCAGAAGCGGCCTGACCAAGGCGCTT 148
Query 37 GCCTCACGGACGCTGGCGCCTCAGATGTGCTCATCTTTTGCTACGGGACCCAGACAATACGATGGAATATTCTA 110
||||||||||||||.|||||||||.||||.|||||||||||||||||.||.||||||||||||||||..|||||
Sbjct 149 GCCTCACGGACGCTCGCGCCTCAGGTGTGTTCATCTTTTGCTACGGGCCCTAGACAATACGATGGAACGTTCTA 222
Query 111 TGAATTTCGTTCTTATTACCTTAAGCCCTCAAAGATGAATGAGTTCCTGGAAAATTTTGAGAAAAACGCTCATC 184
||||||||||.|||||||||||||.||.|||||.|||||||.||||.||||||||.||.||||||||..|||||
Sbjct 223 TGAATTTCGTACTTATTACCTTAAACCTTCAAATATGAATGCGTTCATGGAAAATCTTAAGAAAAACATTCATC 296
Query 185 TTCGGACAGCTCACTCTGAATTGGTTGGATACTGGAGTGTAGAATTTGGAGGCAGAATGAATACAGTGTTTCAT 258
|||||||..||.||||||||||||||||||.||||||||||||||||||||||||||.|||||.||||||||||
Sbjct 297 TTCGGACCTCTTACTCTGAATTGGTTGGATTCTGGAGTGTAGAATTTGGAGGCAGAACGAATAAAGTGTTTCAT 370
Query 259 ATTTGGAAGTATGATAATTTTGCTCATCGAACTGAAGTTCGGAAAGCCTTGGCCAAAGATAAGGAATGGCAAGA 332
||||||||||||||||||||||||||||||.|||||||||||||||||||.|||||...|||||||||||||||
Sbjct 371 ATTTGGAAGTATGATAATTTTGCTCATCGAGCTGAAGTTCGGAAAGCCTTAGCCAACTGTAAGGAATGGCAAGA 444
Query 333 ACAATTCCTCATTCCAAATTTGGCTCTCATTGATAAACAAGAGAGTGAGATTACTTATCTGGTACCATGGTGCA 406
|||||...||||||||||||||||||.|||||||||||||||||..||.||||||||.|||.|||||||||.||
Sbjct 445 ACAATCTATCATTCCAAATTTGGCTCGCATTGATAAACAAGAGACGGAAATTACTTACCTGATACCATGGTCCA 518
Query 407 AATTAGAAAAACCTCCAAAAGAAGGAGTCTATGAACTGGCCACTTTTCAGATGAAACCTGGTGGGCCAGCTCTG 480
||||||||||.|||||||||||
Sbjct 519 AATTAGAAAAGCCTCCAAAAGA---------------------------------------------------- 540
Query 481 TGGGGTGATGCATTTAAAAGGGCAGTTCATGCTCATGTCAATCTAGGCTACACAAAACTAGTTGGAGTGTTCCA 554
Sbjct 541 -------------------------------------------------------------------------- 540
Query 555 CACAGAGTACGGAGCACTCAACAGAGTTCATGTTCTTTGGTGGAATGAGAGTGCAGATAGTCGTGCAGCTGGGA 628
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ------------------------AGTTCATGTTCTTTGGTGGAATGAGAGTGCAGATAGTCGTGCAGCTGGGA 590
Query 629 GACATAAGTCCCATGAGGATCCCAGAGTTGTGGCAGCTGTTCGGGAAAGTGTCAACTACCTAGTATCTCAGCAG 702
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||
Sbjct 591 GACATAAGTCCCATGAGGATCCCAGAGTTGTGGCGGCTGTTCGGGAAAGTGTCAACTACCTAGTTTCTCAGCAG 664
Query 703 AATATGCTTCTGATTCCTACATCGTTTTCACCACTGAAA----------------------------------- 741
||||||||||||||||||.||||.|||||||||.|||||
Sbjct 665 AATATGCTTCTGATTCCTGCATCATTTTCACCATTGAAATAGTTTTCTACTGAAATACAAAACATTTCATTAAC 738
Query 742 -------------------------------------------------------------------------- 741
Sbjct 739 TGCTCTAAGATGTGTCTGCTAATGGTGCTTAAATTCTCCCAAGAGGTTCTCGCTTTTATTTGAAGGAGGTGGAA 812
Query 742 -------------------------------------------------------------------------- 741
Sbjct 813 GAGAAACAGATATGCAACCAATCTGATTTGGTTCCACACCCTGCCACAGAAGTCCCAAAGGAGAAGCAAATGCC 886
Query 742 -------------------------------------------------------------------------- 741
Sbjct 887 ACTTGTAGACTCAAACTCTGGACTTCATTCTCAGCACCATCTCTTAACCTACTGAGTAAATCCTATGAACCTGA 960
Query 742 -------------------------------------------------------------------------- 741
Sbjct 961 CTAGGGTGGCAACTGAAGTTGTAGTACTTTCTGTCTTCAAAGGAGGGTGAACCTGGAGTATGTTGGAAGAAGTG 1034
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1035 TTAGGTTCATTAGAGACACCTCTTTCATAACTGCTGTCACCTAGAATGTCTATTCTCTAAGCACCTTCTTGAAA 1108
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1109 GAAGCACATTCCCCCAGGAGGAGGAAATGGTTTGTTTTCTTTAGTGACAGTTGGCCCAGGATCCTAAGGTAAAG 1182
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1183 GAGTATGGGCACTAGACAAAATGAGTTTTATAATAGTCGATTGGAAGGAATGGAAGTTTTTGAATCACAGGCTT 1256
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1257 CTGCCTTGAAAGGGCAAGTCCGTGGTGGTCATGAACCACCCAGAGTGTGTACAAGGCTCCTGCCAGAAGAAATG 1330
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1331 CCTGTAGGATTAAAAGCAAAACAGCAGAATCAAAAAGGAAGGGCACGATGATGCCCAGGTGCAGCCTATATTAT 1404
Query 742 ------------------------------------------ 741
Sbjct 1405 TAACAGACAAGGAAAGAATCCAAATAAAAGTTCTGTAAACCA 1446
