Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02941
Subject:
NR_132353.1
Aligned Length:
4060
Identities:
374
Gaps:
3686

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCCACCCCGTGAGCAGCCCAAACCGACCACCGTCCTCCCCCAGCTCCCACCAATCGGATCGCAGGGACTCGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCACACTGCTGAGTCCGCTGACACTGCGTCCGGGGCCAGACGACGATATCAGCGCGGGGTCCCCACAACGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATGGGGCAGAGCCAACTCTCGAGCGCGTGATCGAAGCCCGCAGTTTTTTCGCCCCCGTCACTTCCGGGTGCGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATCTCTTCTGTCCGGCCAGCCGCTGGAGTCGTTAGGTGCCGCCTTGCTTCTGACGAGCCACACGTTTGCTTCT  296

Query    1  -------------------------ATGAGTGTCCCTGGGCCGTCGTCTCCGGACGGGGCCCTGACACGGCCAC  49
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCCTGTGTTCCCAGCTGGAGGGACATGAGTGTCCCTGGGCCGTCGTCTCCGGACGGGGCCCTGACACGGCCAC  370

Query   50  CCTACTGCCTGGAGGCCGGGGAGCCGACGCCTGGTTTAAGTGACACTTCTCCAGATGAAGGGTTAATAGAGGAC  123
            |||||||||||||||||||||||||||||||||                                         
Sbjct  371  CCTACTGCCTGGAGGCCGGGGAGCCGACGCCTG-----------------------------------------  403

Query  124  TTGACTATAGAAGACAAAGCAGTGGAGCAACTGGCAGAAGGATTGCTTTCTCATTATTTGCCAGATCTGCAGAG  197
                                                                                      
Sbjct  404  --------------------------------------------------------------------------  403

Query  198  ATCAAAACAAGCCCTCCAGGAACTCACACAGAACCAAGTTGTATTGTTAGACACACTGGAACAAGAGATTTCAA  271
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  404  ---------------------------ACAGAACCAAGTTGTATTGTTAGACACACTGGAACAAGAGATTTCAA  450

Query  272  AATTTAAAGAATGTCATTCTATGTTGGATATTAATGCTTTGTTTGCTGAGGCTAAACACTATCATGCCAAGTTG  345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  451  AATTTAAAGAATGTCATTCTATGTTGGATATTAATGCTTTGTTTGCTGAGGCTAAACACTATCATGCCAAGTTG  524

Query  346  GTGAATATAAGAAAAGAGATGCTGATGCTTCATGAAAAAACATCAAAGTTAAAAAAAAGAGCACTTAAACTGCA  419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  525  GTGAATATAAGAAAAGAGATGCTGATGCTTCATGAAAAAACATCAAAGTTAAAAAAAAGAGCACTTAAACTGCA  598

Query  420  GCAGAAGAGGCAAAAAGAAGAGTTGGAAAGGGAGCAGCAACGAGAGAAGGAGTTTGAAAGAGAAAAGCAGTTAA  493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  599  GCAGAAGAGGCAAAAAGAAGAGTTGGAAAGGGAGCAGCAACGAGAGAAGGAGTTTGAAAGAGAAAAGCAGTTAA  672

Query  494  CTGCCAGACCAGCCAAAAGGATG---------------------------------------------------  516
            |||||||||||||||||||||||                                                   
Sbjct  673  CTGCCAGACCAGCCAAAAGGATGTGAAAAGTTGTGTTTGTGTGTTTTCTTCTCCTGTCCCATATTTGGGTTATG  746

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct  747  ATGACTCAAGTGTAGACTGAAGTTGAGGTAGTGCCTTATGCCATTATGTCATATGTTGAAATCCTTATTCCGGT  820

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct  821  ATTACTGTGTCTCCATGCCTTTTTTCCAAGTAGCAGACGTCATGTTGCATGGTTTTTGATATTTATATGTAAGT  894

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct  895  TTTTCAAATTTTGCTTAATTTTAAAATTTATTATTTTGATCTTGAATTATTTATAAACTGGAAAGTGGTTTGAT  968

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct  969  TATTGTGAGTCAAAACTCTAAGTGGTTAAAAATTAGTATGAATTTTTTAGCTTCTTAATGAATATGGATTTAAA  1042

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1043  ACTCTCCAGTTCTTATTTTATGAAATGACTTGCCTTTCTGGTAATACAATGCTGATTTTTTAGTAATTGCCTTT  1116

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1117  TCATTACTTTGTTAAGAAGAAATGCCAGCTGTTTAATCACACCTACCCCTGGAAAAGAGGTAAACCTTTTGAAC  1190

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1191  AGTTGAATTTCATCAGAAGCTCTATAGCTTTTTGGTGAGAGGAAGTGATACTCTTTATTACAAGAAACAAGGAA  1264

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1265  TTAACAAAAATAAGGAACTTGTTGCTACCTTTCTTTTCTGTTGAACATTAAAAATAATTTGGTTTGTGGACTGG  1338

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1339  GCATGGTGGCTTATGGAAAAGAGGTGAGCCTTTGTGAAGAACATAATGGAAAAGTGCATGTACGGGAAATAACA  1412

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1413  GCACTTTAGGTGTAGTTCAGGTGAGCAAGATGCCAGATAGTTTCTACTAACCATATACTCTTTCTGCTTCTTAG  1486

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1487  CGTCGTTGTCACTGCTTCTGTGGCTTTTGGGTTCAAAGTAGATTATATATATTCCTAAAGCTTGGTGGAGGTAG  1560

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1561  TGGAGCTATCACACACTCAAATGAGCTTGTATATTTATAATACAATATAGTATTATAGTAACAGTTATCATACA  1634

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1635  CTGAGATATAGTTTCTGTGCTTGTAAAAAATTCTTGAAGTGAGGCCGGGTGCGGTGGCTCATGCCTGTAATCCC  1708

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1709  AACGCTTTGGGACGCCGAGGCGGGTGGATCATGAGGTCAAAAGATTGAGACCATCCTGGCCAACATGGTGAAAC  1782

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1783  CCCGTCTCTACTAGAAATACAAAAATTAGCTGGGTGTGGGGGCGTGCGCCTGTAGTCCCAGCTACTTGGGAGGC  1856

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1857  TGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTAAGCCAAGATCGTGCCACTGCACTCCAGCC  1930

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 1931  TTGGTGACAGAGCAAGACTCCGTCTCCAAAAAAAAGAAAAAAAAATTTCTTGAAGTGGAATGATGTACACCAAA  2004

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2005  TACCCACTTTATAGATAATTACAGGGATGGTGAAAAATTAGTAAATAGCTTCACAAAAGAGGCAGCGTGATACC  2078

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2079  TTTAGTGTTTTCTAGAATTTTTTTCTGGATATTATATGTAAGAATTTATTGTTTGAGGGAAATACGAGGTTTCA  2152

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2153  TTGTTTAAAATCAAGAGTGTATTGTTTACTGTTTTACAGTATTATTTAATATCCAACTGGTCTCCAATCTCCAT  2226

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2227  TACATAGGGACTGTACAGAGCCTGTGAAGATGTATGAATGGTATCTTTTATAATCCACAATACATTTCTGGTAA  2300

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2301  GATGGAATCACTACCTCTGATCACATATCAGGCTAACGATAGAGAAAGCATTAGGTTTAAGTTGAGGGCTAAGA  2374

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2375  ACTGGTTTGTTTAAAGGTTTAAATTGTTGGAAAAGAGCATTTGCCTTCTTTAATGAATGATGGTCTCACAATTC  2448

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2449  AGTTGACTTTGACCTAATATTTAAGAATATAAATATATTTTATTTGAAAGGCTGAGTGTTGCCCTCAAACACTT  2522

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2523  GCTAAAACTGCCTAGGGCAGGATTCATTAGGGCTTGCAGACAATGTCACCTAAATTGCTGAATGTACTCATTAT  2596

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2597  AATATGATATCTGACAAAGGTAGTACAGCGTTTCTGAGTCATTTGGGACCAACTGCAGTGGTTGTTTAAAATGC  2670

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2671  TGGTTCCTGCACACAATTCTCTATCTACTGAAGCACATCTGTTTTCTTTGTTTGTTTTGCTTTGCTTTTTGTTT  2744

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2745  TTAAAGTTTCCCCCAGTGATTCCAGTGCACCTGAAAAGTTGAGAACCACAGGCTTAGTGGTACGTTGGGGTTTC  2818

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2819  CCACGCTAGGCTGCATAGCATTATAACCTGGGAACGTTAAAAAAAATACAGACATTCTTGATTCTTAGTGTAGT  2892

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2893  TATGATGTGGATCCTACGTATTTTTTAAAAAACTCTCCAGATAATTTTGATGTCACGAGTCACTAGTATAGACT  2966

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 2967  ATCTATCTAGTGAGTTGTATTATAAGCGATGAAATACTTTAAAAGCTACCCAGTAACTCTTGGGATTAATTTTA  3040

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3041  TGAAATAAATTCTGAGCTGCTGCTTTTGATATAGTCAGACTTAAGACTGAACCCCAGTAGACAGGCAATAGATA  3114

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3115  TAGAATTCTGGTTAGCTAATTGAACTTTTGTGACCTGTTTAAAAACAAATCAAATTTATTGAACAAATGACAAG  3188

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3189  GCACAAATACTTTCAGAATTGTATTTCAGTTTTGAAGATTTAAAAAAAATGTGAAAATAAATATATATTAGTAT  3262

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3263  CCTTTATTTTAAAGTCAATTGTAAACCAGAAGTACTGTTATTTTGGTGATTAAAATCCAAAACTTTAGCTGTAT  3336

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3337  TTCAGTAACAAAAACATACCTTACTAGACTGTGATGGCTCACACCTGTAATCCCAGTGCTTTGGGAGGCTGAGG  3410

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3411  TGGGAAGATTCTTTGAGCCCAGGAGTTCAAGGCTGCAGTGAATTCTGATCGCACCACTGAACTCCAGCCCGTAT  3484

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3485  GACAGAGTGAGACCCTGTTTCTAAAAACAAAACAAACAAACAAACAAACAACGTATCTTACTGACTAAACTGGA  3558

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3559  ATGGAAATCTTATAATTAGTGTTGTATTTTTCTGCAAAATAGTGAATTGGTACTTGGGAGACTTCTGTTCTTTG  3632

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3633  TTGAAAAAAATTGCCTTTGTTTTGAAATTATATCACCTGTGTTCTGAACTAAAATGATGGGAGTTCATTTTGTA  3706

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3707  TTTACTTTGCAGTAAGTATCATGTAAATATGCAAATGTTGAATGTAATATAGATTGTGTCCTCATTGAGTTTTT  3780

Query  517  --------------------------------------------------------------------------  516
                                                                                      
Sbjct 3781  GGGTGATACAGTTTATAAATATAACAATTATACACCCTCATACATTCGTCTGATTTTGAGCTTGTAAGATGAGA  3854

Query  517  ----------------------------------------------------------------  516
                                                                            
Sbjct 3855  ACTGCTTTTTACACATTTAATAAAAAAAGGTCTCTGAATTATCTGAAAAAAAAAAAAAAAAAAA  3918

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