Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02991
- Subject:
- NM_001244816.1
- Aligned Length:
- 2076
- Identities:
- 273
- Gaps:
- 1779
Alignment
Query 1 ATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCA 74
Query 75 CTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTG 148
Query 149 ACCTCGCCCACGCCCAGCAGCAGCAGCAACA----------GTGGCA-------TC--TCATAA--ACCATCAG 201
||||||||||||||||||||||||||||||| |||||| || ||.|.| |.||.|||
Sbjct 149 ACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAG 222
Query 202 CCCTCTAGGAGTCCCAGC-AGT---TGGCTTAAGAGACTAATTT--CAAGCCCTTGGGAGTTGGA--------- 260
| || |||| ||| |||.|||| |||.| |||| .|||.| ||
Sbjct 223 C-----AG------CAGCAAGTTAGTGGATTAA------AATCTCCCAAG-----AGGAAT--GACAAACAACC 272
Query 261 AGTCCTGCAGGTCCCCTTGTGGGGAGCAGTTGCTGAGACGAAGATGAGTGGACCTGTGTGTCAGCCTAACCCTT 334
||..||.|||||.|||.||| ||||.||| |.||||| .||| |||...||.|.||.
Sbjct 273 AGCTCTTCAGGTTCCCGTGT------CAGTGGCT------ATGATGA---CACC------TCAAGTTATCACTC 325
Query 335 CCC--CATTT---------------------------------------------------------------- 342
||| ||..|
Sbjct 326 CCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTGCTGAGCCCTCAGCAGCTCCAGGTTCTCCTCCAGCAGCAG 399
Query 343 -------------------------------------------------------------------------- 342
Sbjct 400 CAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAGTTTTATAAAAAACAACAGGAACAGTTGCAGCTTCAACT 473
Query 343 -------------------------------------------------------------------------- 342
Sbjct 474 TTTACAACAACAACATGCTGGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGC 547
Query 343 -------------------------------------------------------------------------- 342
Sbjct 548 AGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT 621
Query 343 -------------------------------------------------------------------------- 342
Sbjct 622 CAGCCCGGGCAGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGCTCTG 695
Query 343 -------------------------------------------------------------------------- 342
Sbjct 696 GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGA 769
Query 343 -------------------------------------------------------------------------- 342
Sbjct 770 CATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCCTTAATAATGAACCCACATGCCTCTACCAATGGACAGCTC 843
Query 343 -------------------------------------------------------------------------- 342
Sbjct 844 TCAGTCCACACTCCCAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCCTCTCTATGGACATGG 917
Query 343 -------------------------------------------------------------------------- 342
Sbjct 918 TGTATGCAAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAACAGTGAGC 991
Query 343 -------------------------------------------------------------------------- 342
Sbjct 992 ATGCGCTGGACGATAGAAGTACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCTT 1065
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1066 GCAAAAGACAAAGAACGCCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCC 1139
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1140 TCAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTTACCTC 1213
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1214 ATACTCCAACGACCCCAACCGCCCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATCACAACCACCAGCATG 1287
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1288 CACACGGTGGGACCCATCCGCAGGCGGTACTCAGACAAATACAACGTGCCCATTTCGTCAGCAGATATTGCGCA 1361
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1362 GAACCAAGAATTTTATAAGAACGCAGAAGTTAGACCACCATTTACATATGCATCTTTAATTAGGCAGGCCATTC 1435
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1436 TCGAATCTCCAGAAAAGCAGCTAACACTAAATGAGATCTATAACTGGTTCACACGAATGTTTGCTTACTTCCGA 1509
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1510 CGCAACGCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTTAGTCTTCACAAGTGTTTTGTGCGAGTAGAAAA 1583
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1584 CGTTAAAGGGGCAGTATGGACAGTGGATGAAGTAGAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAACC 1657
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1658 CTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCTTTACAGGCTTCAATG 1731
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1732 GCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT 1805
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1806 ACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTA 1879
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1880 TGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTA 1953
Query 343 -------------------------------------------------------------------------- 342
Sbjct 1954 GTGACAACAGCCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACAT 2027
Query 343 ---- 342
Sbjct 2028 GGAG 2031
