Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03028
- Subject:
- NR_028476.1
- Aligned Length:
- 2097
- Identities:
- 1001
- Gaps:
- 1096
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTCCTTCAGCCTCGTTCCCGGGCAGTATAAAGTTTGCTGTCTCCTTTGTTCGCCCTCGTTGCGCAGTAGTGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCGGCTTCGCGGTTCGGTCCTCGCACCCGGCAGCCGCCACTGGTGCTGAGCTGCTAGGAAGCCCCTATCGCCG 148
Query 1 --------------------------------------------------------------ATGGTTGAAGCA 12
||||||||||||
Sbjct 149 AGCTCGTTGGAGCTTGAACCCATTGTCACCCCTCCGACTCACCGGCCCAAAAAAAAAAAAACATGGTTGAAGCA 222
Query 13 GATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACGGAAACAAATGAGAAAGCTCTTGAAGCAGTATTTGG 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACGGAAACAAATGAGAAAGCTCTTGAAGCAGTATTTGG 296
Query 87 CAAATATGGACGAATAGTGGAAGTACTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGATTTGCTTTTG 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAATATGGACGAATAGTGGAAGTACTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGATTTGCTTTTG 370
Query 161 TCACCTTTGAAAGCCCAGCAGACGCTAAGGATGCAGCCAGAGACATGAATGGAAAGTCATTAGATGGAAAAGCC 234
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCACCTTTGAAAGCCCAGCAGACGCTAAGGATGCAGCCAGAGACATGAATGGAAA------------------- 425
Query 235 ATCAAGGTGGAACAAGCCACCAAACCATCATTTGAAAGTGGTAGACGTGGACCGCCTCCACCTCCAAGAAGTAG 308
Sbjct 426 -------------------------------------------------------------------------- 425
Query 309 AGGCCCTCCAAGAGGTCTTAGAGGTGGAAGAGGAGGAAGTGGAGGAACCAGGGGACCTCCCTCACGGGGAGGAC 382
Sbjct 426 -------------------------------------------------------------------------- 425
Query 383 ACATGGATGACGGTGGATATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTCCCAGTAAAAAGAGGA 456
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 -----GATGACGGTGGATATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTCCCAGTAAAAAGAGGA 494
Query 457 CCACCACCAAGAAGTGGGGGTCCTCCTCCTAAGAGATCTGCACCTTCAGGACCAGTTCGCAGTAGCAGTGGAAT 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 495 CCACCACCAAGAAGTGGGGGTCCTCCTCCTAAGAGATCTGCACCTTCAGGACCAGTTCGCAGTAGCAGTGGAAT 568
Query 531 GGGAGGAAGAGCTCCTGTATCACGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAACCGCTGCCCTCTC 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 569 GGGAGGAAGAGCTCCTGTATCACGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAACCGCTGCCCTCTC 642
Query 605 GTAGAGATGTTTATTTGTCCCCAAGAGATGATGGGTATTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCA 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 643 GTAGAGATGTTTATTTGTCCCCAAGAGATGATGGGTATTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCA 716
Query 679 AGTTCTCGTGATACTAGAGATTATGCACCACCACCACGAGATTATACTTACCGTGATTATGGTCATTCCAGTTC 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 AGTTCTCGTGATACTAGAGATTATGCACCACCACCACGAGATTATACTTACCGTGATTATGGTCATTCCAGTTC 790
Query 753 ACGTGATGACTATCCATCAAGAGGATATAGCGATAGAGATGGATATGGTCGTGATCGTGACTATTCAGATCATC 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 791 ACGTGATGACTATCCATCAAGAGGATATAGCGATAGAGATGGATATGGTCGTGATCGTGACTATTCAGATCATC 864
Query 827 CAAGTGGAGGTTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCC 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 865 CAAGTGGAGGTTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCC 938
Query 901 CCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTGGAAGTCGAGA 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 CCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTGGAAGTCGAGA 1012
Query 975 CAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTC 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013 CAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTC 1086
Query 1049 CCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGT 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087 CCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGT 1160
Query 1123 GGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATAC----------------------- 1173
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1161 GGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATACTAGAAACAAACAAAACTTTGGAC 1234
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1235 CAAAATCCCAGTTCAAAGAAACAAAAAGTGGAAACTATTCTATCATAACTACCCAAGGACTACTAAAAGGAAAA 1308
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1309 ATTGTGTTACTTTTTTTAAATTCCCTGTTAAGTTCCCCTCCATAATTTTTATGTTCTTGTGAGGAAAAAAGTAA 1382
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1383 AACATGTTTAATTTTATTTGACTTTCGCATTGCTTTTCAACAAGCAAATGTTAAATGTGTTAAGACTTGTACTA 1456
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1457 GTGTTGTAACTTTCCAAGTAAAAGTATCCCCTAAAGGCCACTTCCTATCTGATTTTTCCCAGCAAATGAGGCAG 1530
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1531 GCAATTCTAAGATCTTCCACAAAACATCTAGCCATCTAAAATGGAGAGATGAATCATTCTACCTATACAAACAA 1604
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1605 GCTAGCTATTAGAGGGTGGTTGGGGTATGCTACTCATAAGATTTCAGGGTGTCTTCCAACTGAAATCTCAATGT 1678
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1679 TCTCAGTACGAAAAACCTGAAATCACATGCCTATGTAAGGAAAGTGCTATTCACCCAGTAAACCCAAAAAAGCA 1752
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1753 AATGGATAATGCTGGCCATTTTGCCTTTCTGACATTTCCTTGGGAATCTGCAAGAACCTCCCCTTTCCCTTCCC 1826
Query 1174 -------------------------------------------------------------------------- 1173
Sbjct 1827 CCAATAAGACCATTTAAGTGTGTGTTAAACAACTACAGAATACTAAATAAAAAGTTTGGCCAAAACCAACCATG 1900
Query 1174 ------------------------- 1173
Sbjct 1901 AAGCTGCAAAAAAAAAAAAAAAAAA 1925
