Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03082
- Subject:
- XR_002957993.1
- Aligned Length:
- 3206
- Identities:
- 924
- Gaps:
- 2282
Alignment
Query 1 -----------------------------------ATGGCGGGGAAGAAGAATGTTCTGTCGTCTCTCGCAGTT 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATAGGAGTGAGCCACGCCCGGGCTGTGGGAATAAGATGGCGGGGAAGAAGAATGTTCTGTCGTCTCTCGCAGTT 74
Query 40 TACGCGGAAGATTCAGAGCCCGAGTCTGATGGCGAGGCTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGAA 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TACGCGGAAGATTCAGAGCCCGAGTCTGATGGCGAGGCTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGAA 148
Query 114 AGGCGGATTGGTATCTGATGCCTATGGGGAGGATGACTTTTCTCGTCTAGGGGGTGATGAAGATGGTTATGAAG 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGCGGATTGGTATCTGATGCCTATGGGGAGGATGACTTTTCTCGTCTAGGGGGTGATGAAGATGGTTATGAAG 222
Query 188 AAGAAGAAGATGAGAACAGTAGACAGTCGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCA 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGAAGAAGATGAGAACAGTAGACAGTCGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCA 296
Query 262 AAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACAT 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACAT 370
Query 336 GTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAGACAAGATCCAGA 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAGACAAGATCCAGA 444
Query 410 AGCTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAGAAAGAATTTCGGAAC 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAGAAAGAATTTCGGAAC 518
Query 484 CCTAGCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAA--------- 548
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTAGCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGTGCGTCT 592
Query 549 -------------------------------------------------------------------------- 548
Sbjct 593 GGCACACGGGGCTGGAGGGTGATGGGGACACCCAGGGTCCTTTGCTTGTTCCATGGGATTTGACCTGCAGCCAC 666
Query 549 -------------------------------------------------------------------------- 548
Sbjct 667 AGAAAGGTCCACGTGGTGGCACGGCTCGTTGAAAGCACAGTCCCTGTCTCTTTTGTTTGAGTCCCTATTGTTCT 740
Query 549 -------------------------------------------------------------------------- 548
Sbjct 741 GAAATAGTCCAATAAAGAGATTCCGGTGGCCGGCCTGGTGCCTGGCCCCTGACTGGTGGGGACATGTGTGGACC 814
Query 549 -------------------------------------------------------------------------- 548
Sbjct 815 TGCTGCTCCTGGGGTTCGCTGGATGGGGGCTTCGTGCTCCCATGTTCTTCAGCACTTGCCAGCCGCCCCTTGGC 888
Query 549 -----------------------------GGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTATGA 593
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TAAAGACCAAAGATGACAGCCGAGCCCCGGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTATGA 962
Query 594 GGCATTAGCCAAGGCCCAGAAAATTGAGATGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAAAA------- 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCATTAGCCAAGGCCCAGAAAATTGAGATGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAAAAGCTTGTT 1036
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1037 GCAGGGACGTGTCTGCAGCGCCTGGGGACCGGAGCTGTCCTTCCCCTGTGCGGGCGGGCACCGCCTCCTCCTGG 1110
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1111 GTGTGAGGAGGAGGGGCCTGGCCAAACGGTTCTGGGCATGTGAGGTGGGGCGGTGGGCGGGGGGTGCCGGGCAT 1184
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1185 GTGCAGAGACCTGGTGATGCCGGGAGGGATACAGTACTGTTTGGAAAGTTCTTTTAAGAGTGAAAAGCCCCTTT 1258
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1259 GGGTTCTTCTTAGACATCTCGCCCTACCCCAGATGGGCAGAGCAGAGTTCATTTCCAATGCCTCTTTTGTGTAG 1332
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1333 TGCCAAGCTCCTGTCCCCCAGGAGCTGACGGATGGCAAAAAGCTGTGGACACCCAGCTTTGCCTGGTCTTATTC 1406
Query 661 --------------------ATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACGCCACGTCCACC 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCTTCCCTCTCCCTCTCCAGATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACGCCACGTCCACC 1480
Query 715 ACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGT 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTGGGATTCGGCTATCCCAGT 1554
Query 789 GACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCG 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCTGTTGTCACGGTCACCACCAGCG 1628
Query 863 CCAGCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAG------------ 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCAGCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCACCATTGTGAAGAAGGCCAAGCAGTGACCTGAGGGG 1702
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1703 CCACCCTAGGACTTGAAAGGACCGTGCAGCCCAGTGACCACTGCCCAGTGGGAGGCGCCACTTTGTATATTTCA 1776
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1777 GGACTGGGACCTACTCCCCAGATGCCACCTGAGAGGAGCTTCTGTTTGGCATTCCAGATGGAAGGACAGGCAGC 1850
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1851 ACGGGAGCCAGGCGCTGTGGACAGGGTCTGTCCACGCACCACCTGGGGTCTGCCGCCTATTAAAAGTGCCGTAT 1924
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1925 TCTTACCTCTTGGCATCTCAGATGCACTGGCCTCTCCTGCATTCTGTTTGCAGGCAAATGCTTCAGCTCACATG 1998
Query 925 -------------------------------------------------------------------------- 924
Sbjct 1999 TCCCCCAAGACTCAATAGTCTTGGTTGGGACTATTGCCTCAGGGTTGACAACAGGGTGATGGAGGCCTGGGACG 2072
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2073 CTGTTCAGAGGGGTGACCCAAGAAGTCACCGTTGTTATCCGTGTATGCCTCTGGGCATGGACAGGCGGGAGTCC 2146
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2147 CCGAGCCCCACGTATGCCCCATCTGCCGCCTTGATCCCAAAACCCAGCCAGTTCTCGGGTGATGGTGGAGCTGT 2220
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2221 GCTCCCTTGAGTGCACTTGAGCACTCCCCAGACCAGATCACTTTTTGGACACACCCAGGAAGGCTTTTGAAGTC 2294
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2295 AAGCCAGTTTCCAGAAGGGCTGGGGTGAGATCCTGACCTGTGCAGAGAGTGGGGAGGCGTCAGCGCCTGGCCAG 2368
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2369 GGCTGCCCCAGTCCTTTGGTGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGAGATGAATCACCTCC 2442
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2443 TGCCTTGGCGAGGCGGCAGCTCATTGTTTACAGGCAAGCCCTGCTCCTGGGAGGGCTCCTGCCACCCCACCCTT 2516
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2517 CCTCTGTGTGTTATCTCTGCCCCACAGCAGCCCCTGGGCAGCACCAGTGGCCACTGGGCTCCCCCCGGGGTTGA 2590
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2591 AACGGGTTTCCCAGACCAGGGGTTCAGAGGAGACTATTTACCCTTCATGATCTTTGGCGATTCTCCACTGGAGC 2664
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2665 GGAAGGGCTGTGTGTCAAAAGAAGGAAGCCAGGCTGTGAAGGGCCGTGTTGCTTTCAGTGGGTGGGCAGAGGTT 2738
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2739 TAGAAAGGTGGTTCTGAAATGGCACCTGGTACTCTTGTGGGACCTGGGGAATATAAGGAACTCTGTGCATGAGG 2812
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2813 TTTCAAAAATAAAAATTGAGTCCACTCTCCCCGTACACACACACTCGGGCACTTCAGGAGGTCAGTTCTCACCC 2886
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2887 CTTCCTCGATGGGGCTTTAAAGCTCTGGGGAGAAGAGCTGCTCCCCACTCATGCCCCAGAGGGACTGTGAAAAG 2960
Query 925 -------------------------------------------------------------------------- 924
Sbjct 2961 GCTTCCTGTGACCTCCGATGGCGGCCCCTCATTGGCCAAGGGCACTGTGGATGTTTTGTGGGAGGCAGCATGGC 3034
Query 925 -------------------------------------------------------------------------- 924
Sbjct 3035 ACCGTGGAAAGGGCAGTAGACGTGGAGCCGGCACCTCTGGTCTGGATTCCACTTAAAACCAGTTGAGTGGTCTC 3108
Query 925 -------------------------------------------------------------------------- 924
Sbjct 3109 AAGCCCTTAACCTCTGTAAGCCTGTTTCTTCTCTGAAATCACAGTAATAAAGCGTCGTAAGATGGTTGGGAAGA 3182
Query 925 ------------------------ 924
Sbjct 3183 ACCAGAGGTGACTTATGCAAAAGC 3206
