Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03168
Subject:
NM_001199187.2
Aligned Length:
1075
Identities:
899
Gaps:
11

Alignment

Query    1  ATGGAAGTTCTGCGTCCACAGCTTATAAGAATTGATGGCCGGAATTACAGGAAGAATCCAGTCCAAG---AACA  71
            |||||.|||||.||.||||||.||.|||...|.|||||.||||||||.||.||||||||..||||.|   ||||
Sbjct    1  ATGGATGTTCTACGCCCACAGATTGTAACGTTCGATGGACGGAATTATAGAAAGAATCCCATCCAGGAGAAACA  74

Query   72  GACCTATCAACATGAAGAAGATGAAGAGGACTTCTATCAAGGCTCCATGGAGTGTGCTGATGAGCCCTGTGATG  145
            |   ||.||||||||||||   ||.|||||.|||||||..|.|||||||||.|...|||||||||||||.|.||
Sbjct   75  G---TACCAACATGAAGAA---GACGAGGATTTCTATCCTGACTCCATGGAATACTCTGATGAGCCCTGCGGTG  142

Query  146  CCTACGAGGTGGAGCAGACCCCACAAGGATTCCGGTCTACTTTGAGGGCCCCCAGCTTGCTCTATAAGCATATA  219
            ||||||||||||..||||||||.||.|||||||||.|.||..|.||.|||||.|||.|||||||.|||||.|||
Sbjct  143  CCTACGAGGTGGCACAGACCCCTCACGGATTCCGGGCCACCGTCAGTGCCCCTAGCCTGCTCTACAAGCACATA  216

Query  220  GTTGGAAAGAGAGGGGACACTAGGAAGAAAATAGAAATGGAGACCAAAACTTCTATTAGCATTCCTAAACCTGG  293
            |||||||||||||||||.||.|.|||.||.||||||.|||||||.|||||.|||||||.||||||.||.|.|||
Sbjct  217  GTTGGAAAGAGAGGGGATACCAAGAAAAAGATAGAAGTGGAGACTAAAACATCTATTAACATTCCGAAGCATGG  290

Query  294  ACAAGACGGGGAAATTGTAATCACTGGCCAGCATCGAAATGGTGTAATTTCAGCCCGAACACGGATTGATGTTC  367
            .||.||.||||||||.||.||||||||.||||||||||||||.||..|.|||||.|||||||||||.||.||.|
Sbjct  291  GCATGAAGGGGAAATCGTGATCACTGGTCAGCATCGAAATGGCGTGGTCTCAGCGCGAACACGGATCGACGTGC  364

Query  368  TTTTGGACACTTTTCGAAGAAAGCAGCCCTTCACTCACTTCCTTGCCTTTTTCCTCAATGAAGTTGAGGTTCAG  441
            |..|||||||.||..|.||.|.||||||.||.||.|||||||||.||||.||||||||||||||||||||||||
Sbjct  365  TCCTGGACACGTTCAGGAGGAGGCAGCCTTTTACCCACTTCCTTTCCTTCTTCCTCAATGAAGTTGAGGTTCAG  438

Query  442  GAAGGATTCCTGAGATTCCAGGAGGAAGTACTGGCGAAGTGCTCCATGGATCATGGGGTTGACAGCAGCATTTT  515
            |||.|.||.||||..|||||||||||.||.|||..|||||||||||.|||||.|||.|||||.||||.||||||
Sbjct  439  GAACGGTTTCTGATGTTCCAGGAGGAGGTGCTGAGGAAGTGCTCCAAGGATCGTGGAGTTGATAGCACCATTTT  512

Query  516  CCAGAATCCTAAAAAGCTTCATCTAACTATTGGGATGTTGGTGCTTTTGAGTGAGGAAGAGATCCAGCAGACAT  589
            .|||||.||.|||||||||||.||||||||||||||||||||.|||.|.||||||.|.||||||||||||||.|
Sbjct  513  TCAGAACCCCAAAAAGCTTCACCTAACTATTGGGATGTTGGTACTTCTAAGTGAGCAGGAGATCCAGCAGACGT  586

Query  590  GTGAGATGCTACAGCAGTGTAAAGAGGAATTCATTAATGATATTTCTGGGGGTAAACCCCTAGAAGTGGAGATG  663
            |||||||.||.||||..|||||||||||||||||||||||.||||||||.||.|.||||||.|||||.||||||
Sbjct  587  GTGAGATCCTGCAGCGCTGTAAAGAGGAATTCATTAATGACATTTCTGGAGGCAGACCCCTGGAAGTCGAGATG  660

Query  664  GCAGGGATAGAATACATGAATGATGATCCTGGCATGGTGGATGTTCTTTACGCCAAAGTCCATATGAAAGATGG  737
            |||||.||.||||||||||||||.|||||||..|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  661  GCAGGCATCGAATACATGAATGACGATCCTGCTATGGTGGATGTTCTTTATGCCAAAGTCCACATGAAAGATGG  734

Query  738  CTCCAACAGGCTACAAGAATTAGTTGATCGAGTGCTGGAACGTTTTCAGGCATCT-GGACTAATAGTGAAAGAG  810
            ||||||||||||.||.||..|.|||||||||||||||||.|||||||||.| .|| |||||.||.|||||||||
Sbjct  735  CTCCAACAGGCTGCAGGAGCTGGTTGATCGAGTGCTGGAGCGTTTTCAGTC-CCTGGGACTCATCGTGAAAGAG  807

Query  811  TGGAATAGTGTGAAACTGCATGCTACAGTTATGAATACACTATTCAGGAAAGACCCCAATGCTGAAGGCAGGTA  884
            ||||..||||||||||||||.||.||.||.|||||.|||||..||||||||||||||||.||.|||||||||||
Sbjct  808  TGGACCAGTGTGAAACTGCACGCCACGGTCATGAACACACTGCTCAGGAAAGACCCCAACGCGGAAGGCAGGTA  881

Query  885  CAATCTCTACACAGCGGAAGGCAAATATATCTTCAAGGAAAGAGAATCATTTGATGGCCGAAATATTTTAAAGT  958
            |||||||||||||||.||.||||||||||||||||||||.|||||.||.|||||||||||.||.|||||||||.
Sbjct  882  CAATCTCTACACAGCAGATGGCAAATATATCTTCAAGGAGAGAGAGTCTTTTGATGGCCGGAACATTTTAAAGA  955

Query  959  TGTTTGAGAACTTCTACTTTGGCTCCCTAAAGCTGAATTCAATTCACATCTCTCAGAGGTTCACCGTAGACAGC  1032
            ..||||||||||||||||||||.|||||.|.|||.|||||.|||||||||||.|||||||||||.||.||||||
Sbjct  956  CATTTGAGAACTTCTACTTTGGTTCCCTGAGGCTCAATTCTATTCACATCTCCCAGAGGTTCACGGTGGACAGC  1029

Query 1033  TTTGGAAACTACGCTTCCTGTGGACAAATTGACTTCTCC  1071
            |||||||||||.||.|||||.|||||..|||||||||||
Sbjct 1030  TTTGGAAACTATGCCTCCTGCGGACATGTTGACTTCTCC  1068

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