Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03217
• Subject: NR_024109.1
• Aligned Length: 1048
• Identities: 533
• Gaps: 476

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTTTTTGGGCGTGGAAAGATGGCGGTAAAAGCCACAATGCGCAGGCGTCATCGCTCACTTCTCCCCTCCCGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCTGCTCCACCTGACGCCTGCGCAGTAAGTAAGCCTGCCAGACACGCTGTGGCGGCTGCCTGAAGCTAGTGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCGCGGCGCCGCGCACTTGTGGTTGGGTCAGTGCCGCGCGCCGCTCGGTCGTTACCGCGAGGCGCTGGTGGCCT  222

Query    1  -------------------------------------------------------------ATGTCGATCTTCA  13
                                                                         |||||||||||||
Sbjct  223  TCAGGCTGGACGGCGCGGGTCAGCCCTGGTTTGCCGGCTTCTGGGTCTTTGAACAGCCGCGATGTCGATCTTCA  296

Query   14  CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGTGCCGGGAAGCGCTTCGAAATC  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||
Sbjct  297  CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGCGCCAGGAAGCGCTTCGAAATC  370

Query   88  GCCTGCTACAAAAACAAGGTCGTCGGCTGGCGGAGCGGCGTGGAAAAAGACCTCGATGAAGTTCTGCAGACCCA  161
            ||||||||||.||||||||||||||||||||||||||||.|                                 
Sbjct  371  GCCTGCTACAGAAACAAGGTCGTCGGCTGGCGGAGCGGCTT---------------------------------  411

Query  162  CTCAGTGTTTGTAAATGTTTCTAAAGGTCAGGTTGCCAAAAAGGAAGATCTCATCAGTGCGTTTGGAACAGATG  235
                                                                                      
Sbjct  412  --------------------------------------------------------------------------  411

Query  236  ACCAAACTGAAATCTGTAAGCAGATTTTGACTAAAGGAGAAGTTCAAGTATCAGATAAAGAAAGACACACACAA  309
                                   |||||||||||||||||||||||||||||||||    ||||||||||||||
Sbjct  412  -----------------------ATTTTGACTAAAGGAGAAGTTCAAGTATCAGAT----AAAGACACACACAA  458

Query  310  CTGGAGCAGATGTTTAGGGACATTGCAACTATTGTGGCAGACAAATGTGTGAATCCTGAAACAAAGAGACCATA  383
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  459  CTGGAGCAGATGTTTAGGGACATTGCAATTATTGTGGCAGACAAATGTGTGACTCCTGAAACAAAGAGACCATA  532

Query  384  CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTCGGTGAAAACCAACAAGAGTACAAAACAGC  457
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct  533  CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTTGGTGAAAACCAACAGGAGTACAAAACAGC  606

Query  458  AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCGGTTCATC  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  607  AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCAGTTCATC  680

Query  532  CTTCCAGTCAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTGAAGATTA  605
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  681  CTTCCAGTGAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTAAAGATTA  754

Query  606  TGGCCAACAGTTAGAAATCGTA--------------TGTCTGATTGACCCGGGCTGCTTCCGAGAAATTG-ATG  664
            ||||||||||||||||||||||              |.|.||.||.|       ||.|.||.|.|.|||| ||.
Sbjct  755  TGGCCAACAGTTAGAAATCGTAAGAGTCAAATATTTTCTTTGCTTCA-------TGTTACCTAAATATTGTATT  821

Query  665  AGCTAATAAAAAAGGAAACTAAAGGCAAAGGTTCTTTGGAAGTACTCAATCTGAAAGATGTAGAAGAAGGAGAT  738
            ..|||.|||.|||                      ||.|.||.|..||.||..|||.|...|.||.||      
Sbjct  822  CTCTAGTAATAAA----------------------TTTGTAGCAAACATTCAAAAAAAAAAAAAAAAA------  867

Query  739  GAGAAATTTGAA  750
               |||      
Sbjct  868  ---AAA------  870