Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03330
Subject:
NM_001355398.1
Aligned Length:
723
Identities:
518
Gaps:
144

Alignment

Query   1  ATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTCTACACTATTTTCCAAGGAGAGGTTGCTAT  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  GGTGACAGACTATGGGGCCTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGT  148
                                                                                 ||||
Sbjct   1  ----------------------------------------------------------------------ATGT  4

Query 149  CATCCTGTCGGGTGGATAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGA  222
           |.||||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct   5  CGTCCTGTCGAGTGGATAAGCCTTCTGAGATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCTGATTGGCCGA  78

Query 223  GAGATGAAAAATGATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGA  296
           ||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||.||||||||||||||.||
Sbjct  79  GAGATGAAAAATGATAGAATAAAAGTGTCCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGACCTCGA  152

Query 297  TCCCAACAATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGAAGATCA  370
           |||||||||.|||.||||||||||||||||||||||.||.||.|||||||||||||||||||||||||||||||
Sbjct 153  TCCCAACAACGTTGTCATTGAGCAAGAAGAGAGGCGCAGACGGTCCTTCCAGGATTACACTGGGCAGAAGATCA  226

Query 371  CCCTTGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATG  444
           ||||||||||.|||.|||||||.||||||||||||||||||||.||||||||||||||.||.||.|||||||||
Sbjct 227  CCCTTGAGGCCGTCCTGAACACGACCTGCAAGAAGTGTGGCTGCAAAGGCCACTTTGCCAAGGACTGTTTCATG  300

Query 445  CAACCAGGTGGGACTAAATACTCTCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTT  518
           ||.||||||||.||.||.||.||||||||.|||||.||||||||||||||.||.|||||||||.|||.||...|
Sbjct 301  CAGCCAGGTGGAACCAAGTATTCTCTGATCCCTGAAGAGGAAGAGGAAAAAGAGGAGGCAAAGGCAGAAGGACT  374

Query 519  TGAGAAGCCTGACCCTACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATA  592
           ||||||||||||.||.||.|.||||.||||.||.||.|||||||||||.|||||||||||||||||||||||.|
Sbjct 375  TGAGAAGCCTGATCCCACGAAGAATTCTTCCAGGAAGAGAAAGAAGGAAAAGAAGAAAAAGAAACATAGAGACA  448

Query 593  GGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAAAGAC  666
           |||||||||||||||.|||.|||||.||||||||||||||.||.|||||||.|||.|||||..|||||||||||
Sbjct 449  GGAAGTCATCTGACTGTGATAGCTCTGACTCTGAGAGTGACACGGGCAAGAAGGCGAGGCATTCATCAAAAGAC  522

Query 667  AGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAG  723
           ||||||||..|.||||||||.||.||||||||||||||||||||||||||||||||.
Sbjct 523  AGCAAGGCCACCAAGAAGAAAAAGAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAA  579