Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03429
• Subject: NM_001301870.2
• Aligned Length: 1140
• Identities: 703
• Gaps: 435

Alignment

Query    1  ATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGGTGGCTCTGGCCCCGCCGGGCCGTTGGCCCAGCCCGCCGGCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCGGTCCCGGGTTCTGTGGGGCGCTGCCCGGTGGCTCTGGCCCCGCCGGGCCGTTGGCCCAGCCCGCCGGCC  74

Query   75  CCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCTGTTCACCCGGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCTGAGCTCCGGTAGCCCGCCGCTGGAGGAGCTGTTCACCCGGGGCGGGCCCTTGCGGACCTTCCTCGAGCGCC  148

Query  149  AGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGAGGCCCGAGTTGCTGGCGGTGATCAAACTGCTGAACGAGAAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGCGGGGTCTGAAGCCCATTTGAAGGTCAGGAGGCCCGAGTTGCTGGCGGTGATCAAACTGCTGAACGAGAAG  222

Query  223  GAGCGGGAGCTGCGGGAGACTGAGCACTTGCTGCACGATGAGAATGAAGATTTAAGGAAACTTGCAGAGAATGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGCGGGAGCTGCGGGAGACTGAGCACTTGCTGCACGATGAGAATGAAGATTTAAGGAAACTTGCAGAGAATGA  296

Query  297  AATCACTTTGTGTCAAAAAGAAATAACTCAGCTGAAGCATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AATCACTTTGTGTCAAAAAGAAATAACTCAGCTGAAGCATCAGATTATCTTACTTTTGGTTCCCTCAGAAGAAA  370

Query  371  CAGATGAAAATGATTTGATCCTGGAAGTAACTGCAGGAGTTGGAGGTCAGGAGGCAATGTTGTTTACATCAGAG  444
            |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct  371  CAGATGAAAATGATTTGATCCTGGAAGTAACTGCAGGAGTTGG-------------------------------  413

Query  445  ATATTTGATATGTATCAGCAATATGCTGCATTTAAAAGATGGCATTTTGAAACCCTGGAATATTTTCCAAGTGA  518
                                                                                      
Sbjct  414  --------------------------------------------------------------------------  413

Query  519  ACTAGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTCAGAAGCCTATAGGCACATGAAATTTGAAGGAG  592
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  414  ---AGGTGGCCTTAGACATGCATCTGCCAGCATTGGGGGTTCAGAAGCCTATAGGCACATGAAATTTGAAGGAG  484

Query  593  GTGTTCACAGAGTACAAAGAGTGCCAAAGACAGAAAAGCAAGGCCGCGTCCATACTAGCACCATGACTGTAGCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  485  GTGTTCACAGAGTACAAAGAGTGCCAAAGACAGAAAAGCAAGGCCGCGTCCATACTAGCACCATGACTGTAGCA  558

Query  667  ATATTACCCCAGCCTACTGAGATTAATCTGGTGATTAATCCGAAAGATTTGAGAATTGACACTAAGCGAGCCAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  559  ATATTACCCCAGCCTACTGAGATTAATCTGGTGATTAATCCGAAAGATTTGAGAATTGACACTAAGCGAGCCAG  632

Query  741  TGGAGCTGGGGGGCAGCATGTAAATACCACGGACAGTGCTGTCCGGATAGTTCATCTTCCAACAG--ATTG---  809
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  .|||   
Sbjct  633  TGGAGCTGGGGGGCAGCATGTAAATACCACGGACAGTGCTGTCCGGATAGTTCATCTTCCAACAGGTGTTGTTT  706

Query  810  --GAAG--------------------------------------------------------------------  813
              |||.                                                                    
Sbjct  707  CTGAATGTCAACAAGAGAGATCTCAGCTGAAAAATAAAGAGCTGGCTATGACAAAGTTACGTGCAAAACTGTAC  780

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct  781  AGCATGCATCTAGAAGAAGAAATAAATAAAAGACAGAATGCTAGAAAAATTCAGATTGGAAGTAAAGGAAGATC  854

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct  855  AGAGAAAATAAGAACATATAATTTTCCACAGAACCGGGTCACAGATCACAGAATAAACAAGACGCTGCATGATC  928

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct  929  TTGAAACTTTTATGCAAGGAGATTATCTACTGGATGAACTTGTACAGTCATTGAAGGAATACGCCGATTATGAA  1002

Query  814  ------------------------------  813
                                          
Sbjct 1003  TCTTTAGTAGAAATTATTTCCCAAAAAGTT  1032