Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03449
Subject:
XM_006522173.3
Aligned Length:
1396
Identities:
1061
Gaps:
230

Alignment

Query    1  -----ATGCTGGCGTCTCAA-----------GGAGTTCTCCTGC-----ATCCTTATGGCG--TGCCTATGATT  51
                 ||.|||||..|| ||           ||||.|..|||.|     |||  .|.||||  | ||.||.|.|
Sbjct    1  ATGAAATCCTGGCAGCT-AATTGCAGTCGTGGGAGATGCCCTTCAGGATATC--AAAGGCGACT-CCAATAACT  70

Query   52  GTACCG-GCAGCTCCTTACCTTCCTGGACTGA------TTCA--------------------------------  86
            |   || ||||      ||   ...||||.||      ||.|                                
Sbjct   71  G---CGCGCAG------AC---AGAGGACAGAAAGGTTTTGAGGCAACAGATGAATTGTGAAAGAGAGCAGCTG  132

Query   87  --GGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGCCCAGTTTGCTCCCCC  158
              |||||||||||||||||||||.||||||||||||||||||||||||||.||.||.||.|||||.||.||.||
Sbjct  133  AGGGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATGCCTCAGCGCAGTTCGCACCACC  206

Query  159  GCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACACAGGCCAGACCACGG  232
            .|||||.||.|||||.||.||||||||||||||||||||.||.|||||||||||||||||.|||||||||||.|
Sbjct  207  CCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAGTACACCGGCCAGACCACTG  280

Query  233  TTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCGGCGGACACGAGCGCT  306
            |.||.||.|||||||||||||||||.|||||..|.|||||||||||.||||||||   .||.|||||.||.||.
Sbjct  281  TCCCTGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAG---TGCTGACACCAGTGCG  351

Query  307  CAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCCCCAGACACAACCTTC  380
            |||||||||||.|||||||||||||||||||||||.|||||.|||||.||.|||||||||||||||||||||||
Sbjct  352  CAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCCCCGACCGACGGCCAGCCCCAGACACAACCTTC  425

Query  381  TGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCAGGTTCCGGGATCCGG  454
            |||||||||.||||.||||||.||||||||||||||||||||.|||||.|||||.|||.|||||||||||||.|
Sbjct  426  TGAAAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATCCCTTTCCGGTTCCGGGATCCAG  499

Query  455  ACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCGAGGCTCAAAG  528
            |||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||
Sbjct  500  ACCTCCGACAAATGTTTGGTCAATTTGGTAAAATATTAGATGTTGAAATTATTTTTAATGAGCGAGGCTCCAAG  573

Query  529  GGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATTACACGGCACCGTGGT  602
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.||||||||
Sbjct  574  GGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGGAGAAATTGCACGGTACCGTGGT  647

Query  603  AGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGACCGTCAACCCTTATA  676
            |||||||||||||||||||||.||||||||.||||||||.||.|||||||||||.|||||.||||||||.||.|
Sbjct  648  AGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAGAAGACTGTCAACCCCTACA  721

Query  677  CAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCAGGCACGGTCCTGTTG  750
            |.||||||||||||||.||||||||||||||.||.||||||||.|||||.|||||||||||||||||.||||||
Sbjct  722  CCAATGGCTGGAAATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTATGCAGGCACGGTGCTGTTG  795

Query  751  TGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATACTTCTGCAATGCCAGG  824
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.||
Sbjct  796  TGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTGCAATGCCTGG  869

Query  825  CTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCCGCGGTCGCACCGTGT  898
            ||||||.|||||.||.|||||.||.||.||.||.|||||||||||.|||||.||||||||.|||||||||||||
Sbjct  870  CTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGTCGCACCGTGT  943

Query  899  ACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTAGTGTATCAAGAGCCTGTG  972
            ||||||||||||||||.||.||||||||||||||.|||||||||||.|||||||||||||||||||||||.|||
Sbjct  944  ACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGAGTAGTGTATCAAGAGCCAGTG  1017

Query  973  TATGGCAATAAATTGCTGCAGGGTGGTTATGCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGC  1046
            |||||||||||||||||.|||||||||||||||||.||||||||.||||||||.||||||||||||||||||||
Sbjct 1018  TATGGCAATAAATTGCTACAGGGTGGTTATGCTGCGTACCGCTATGCCCAGCCCACCCCTGCCACTGCCGCTGC  1091

Query 1047  CTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTAACACCTCTGCAGTTACGGACG  1120
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1092  CTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAACAGATGAAATTTCTTGTAACACCTCTGCAGTTACGGACG  1165

Query 1121  AGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCA---------  1185
            ||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||         
Sbjct 1166  AGTTTATGCTGCCGACCCCTACCACCACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGCCCCAAG  1239

Query 1186  --------------------------------------------------------------------------  1185
                                                                                      
Sbjct 1240  GTTCCAGCCCCAGCACAGACTTCAGAGGAGCTAAGCTGCAGACTTCCAGGCCTCTGCTGTCAGGCAGCTGAGCA  1313

Query 1186  ----------------------------------------------------------------  1185
                                                                            
Sbjct 1314  TCTGCCTGCCTCTCCTCCCCTTTTACAATTCATGTTTAAAGTCATAGTCGCCCAGGAGAGAAAG  1377

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