Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03449
- Subject:
- XM_011245919.1
- Aligned Length:
- 1326
- Identities:
- 876
- Gaps:
- 360
Alignment
Query 1 ATGCTGGCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCGTGCCTATG-ATTGTACCG-------GCAGCTCCT 66
||| ||||| | ||||||
Sbjct 1 ---------------------------------------------ATGAATTGT---GAAAGAGAGCAGCT--- 23
Query 67 TACCTTCCTGGACTGATTCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTC 140
|| .|||||||||||||||||||||.||||||||||||||||||||||||||.||.||
Sbjct 24 ----------GA-------GGGGTAATCAGGAAGCAGCCGCCGCCCCTGACACAATGGCTCAGCCTTATGCCTC 80
Query 141 GGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGT 214
.||.|||||.||.||.||.|||||.||.|||||.||.||||||||||||||||||||.||.|||||||||||||
Sbjct 81 AGCGCAGTTCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAGT 154
Query 215 ACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGC 288
||||.|||||||||||.||.||.||.|||||||||||||||||.|||||..|.|||||||||||.||||||||
Sbjct 155 ACACCGGCCAGACCACTGTCCCTGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAG- 227
Query 289 CCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCA 362
.||.|||||.||.||.|||||||||||.|||||||||||||||||||||||.|||||.|||||.||.|||||
Sbjct 228 --TGCTGACACCAGTGCGCAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCCCCGACCGACGGCCA 299
Query 363 GCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCT 436
|||||||||||||||||||||||||||.||||.||||||.||||||||||||||||||||.|||||.|||||.|
Sbjct 300 GCCCCAGACACAACCTTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATCCCTT 373
Query 437 TCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTT 510
||.|||||||||||||.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 374 TCCGGTTCCGGGATCCAGACCTCCGACAAATGTTTGGTCAATTTGGTAAAATATTAGATGTTGAAATTATTTTT 447
Query 511 AATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAA 584
||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 448 AATGAGCGAGGCTCCAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGGAGAA 521
Query 585 ATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAA 658
|||.|||||.|||||||||||||||||||||||||||||.||||||||.||||||||.||.|||||||||||.|
Sbjct 522 ATTGCACGGTACCGTGGTAGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAGA 595
Query 659 AGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTAT 732
||||.||||||||.||.||.||||||||||||||.||||||||||||||.||.||||||||.|||||.||||||
Sbjct 596 AGACTGTCAACCCCTACACCAATGGCTGGAAATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTAT 669
Query 733 GCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATA 806
||||
Sbjct 670 GCAG---------------------------------------------------------------------- 673
Query 807 TACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAG 880
||||.||||||||.|||||.||.|||||.||.||.||.||.|||||||||||.|||||.||||
Sbjct 674 -----------TGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAG 736
Query 881 GCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTA 954
||||.|||||||||||||||||||||||||||||.||.||||||||||||||.|||||||||||.|||||.||.
Sbjct 737 GCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGTGTT 810
Query 955 GTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCTAC 1017
||.||.||.|| || |.||||| ||||| ||||||||||||||.||||||||.
Sbjct 811 GTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCGTACCGCTAT 870
Query 1018 GCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAAT 1091
||||||||.|||||||||||||||||||||||||||||
Sbjct 871 GCCCAGCCCACCCCTGCCACTGCCGCTGCCTACAGTGA------------------------------------ 908
Query 1092 TTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCC 1165
||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 909 -----------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACACTTGCTCCAGCCCC 965
Query 1166 CACCTACGGCGTTGGTGCCA------------------------------------------------------ 1185
||||||||||||||||||||
Sbjct 966 CACCTACGGCGTTGGTGCCATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATG 1039
Query 1186 -------------------------------------------------------------------- 1185
Sbjct 1040 TGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATAT 1107