Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03449
- Subject:
- XM_017023319.2
- Aligned Length:
- 1865
- Identities:
- 1005
- Gaps:
- 838
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCAGCTCCGCGCCGCGCGGACCCACCGAGCCCGCGCTCAGACGCCCCAGCTCCGCCGAGAGGCCGCTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGGGTCCTTCCTCTTCCCCAAGTGCAGGCAGAGCCCCCGGAGCCATGGCCAGCCCTTCCGGCAGCTCCGAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACTGGCAAGCCCCGAGGCAGGGATGGCCGGCCCAGGAGGGAGGAGGACGACGTCCCTCCCGAAGAGAAGAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCGGCTGGGGCTGGAGGGGGGAAGCGCACAGCCCGAGGACTGCGAGGACGGGAAGGACGCGCCGCGGCCGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGAGGAGACCGGCACCCAGACAGGTGGCGACGGCAGAGGAGATCTACTGTGCCTGCCATACAGCCTGGTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGGTCAGGACTACAAGTCTGAAAATTCAACCCTCCTCCCCGGTGCCAAGAACAGCCTGCAAGACTCCGTTTCG 444
Query 1 ----------------------------ATGCTGGCGTCTCAAGGAGTTCTCCTGCA-----TCCTTATGGCGT 41
|..|||| |||| ||..|||.|||| ..||||..|| |
Sbjct 445 GCAAGTCAGGCTACAGGCAAAGCTGAGGAAACTGG----TCAA--AGAACTCATGCAAGTGGAACTTACAGC-T 511
Query 42 GCCTATGATTGTACCGGCAGC--TC---------------CT----TACCTTCCTG---------GACTGA--- 82
.||| ||||.|.|| .|||| || || |||||.|.|| |||.||
Sbjct 512 TCCT-TGATCGGAC--TCAGCATTCAGATATCAAAGCAGACTGCAATACCTGCGTGGAAATAGAAGACAGAAAG 582
Query 83 --TTCA-----------------------------------GGGTAATCAGGAAGCAGCCGCTGCCCCTGACAC 119
|||| |||||||||||||||||||||||||||||||||
Sbjct 583 GTTTCAAGACAACAGATGAATTGTGAAAGAGAGCAGCTAAGGGGTAATCAGGAAGCAGCCGCTGCCCCTGACAC 656
Query 120 AATGGCTCAGCCTTACGCTTCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 AATGGCTCAGCCTTACGCTTCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTC 730
Query 194 ATCCCCACCCCGCGCCAGAGTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCC 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 731 ATCCCCACCCCGCGCCAGAGTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCC 804
Query 268 CAGACGCACTCCGAGCAGAGCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGA 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 CAGACGCACTCCGAGCAGAGCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGA 878
Query 342 CGCAGCACCGACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGC 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 CGCAGCACCGACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGC 952
Query 416 TGCATGTCTCCAATATCCCCTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATC 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 TGCATGTCTCCAATATCCCCTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATC 1026
Query 490 TTAGATGTTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGA 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 TTAGATGTTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGA 1100
Query 564 TGCGGACAGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAG 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1101 TGCGGACAGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAG 1174
Query 638 CACGTGTAATGACAAATAAAAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCA 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175 CACGTGTAATGACAAATAAAAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCA 1248
Query 712 GTCTACAGTCCCGAATTCTATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAG 785
|||||||||||||||||||||||||
Sbjct 1249 GTCTACAGTCCCGAATTCTATGCAG------------------------------------------------- 1273
Query 786 TGCCCCCAGTTCACTTGTATATACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCT 859
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 --------------------------------TGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCT 1315
Query 860 ACCGAGGGGCGCACCTGCGAGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCG 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 ACCGAGGGGCGCACCTGCGAGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCG 1389
Query 934 ATCCCGGCCTACGGCGGAGTAGTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGT 996
|||||||||||||||||.||.||.||.||.|| || |.||||| ||||| |||
Sbjct 1390 ATCCCGGCCTACGGCGGTGTTGTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGT 1449
Query 997 GGTTATGCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGT 1070
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 GGTTATGCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGA--------------- 1508
Query 1071 CTTCGTTGCAGCAGATGAAATTTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCA 1144
||||||||||||||||||||||||||||||||||||
Sbjct 1509 --------------------------------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCA 1544
Query 1145 CCACGCACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCA--------------------------------- 1185
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1545 CCACGCACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCACCTTTGACTGATGCCAAGA 1618
Query 1186 -------------------------------------------------------------------------- 1185
Sbjct 1619 CTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAAC 1692
Query 1186 --------------- 1185
Sbjct 1693 CGTTTTGCTCCATAC 1707
