Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03477
- Subject:
- XR_926266.2
- Aligned Length:
- 3898
- Identities:
- 1737
- Gaps:
- 2161
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATAAACGTGGCGGGACGTATGTGTCATGGCGCTCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGGCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGTGGTTGGTTACTCGCACTATGCAGACGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCGGTGCTGAATACAACATTTATTACTAAAGCCAGACACTGGATCACCGTCACGGCAGATGTCAGCACACCTG 222
Query 1 ----------------------------------------------------------ATGCCTTCTGCATCCT 16
||||||||||||||||
Sbjct 223 TTGTAATCAACTCATCTTTCAAGAGGACTTTAGACTAATTGCAGATAATTAAGAGAATATGCCTTCTGCATCCT 296
Query 17 GTGATACACTACTGGATGACATCGAAGATATCGTGTCTCAGGAAGATTCAAAACCACAAGATAGGCATTTTGTA 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGATACACTACTGGATGACATCGAAGATATCGTGTCTCAGGAAGATTCAAAACCACAAGATAGGCATTTTGTA 370
Query 91 AGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACCCAAAAATATTTGCAAGAGGAAGAAAACAGTCCACC 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACCCAAAAATATTTGCAAGAGGAAGAAAACAGTCCACC 444
Query 165 AAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATACGAACATGGGGTTGTTCTCATAATAATTCAGATG 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATACGAACATGGGGTTGTTCTCATAATAATTCAGATG 518
Query 239 GAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATAAAATTACAGAAAATGCATCCGATGCAGATTTATGG 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATAAAATTACAGAAAATGCATCCGATGCAGATTTATGG 592
Query 313 CTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGACCACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGA 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGACCACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGA 666
Query 387 GAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTA 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTA 740
Query 461 TCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTGTGGAGGAGACAATTAAAGGTCACTCTGTGAGACTG 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTGTGGAGGAGACAATTAAAGGTCACTCTGTGAGACTG 814
Query 535 CTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGAGCACGATTGGATTTGCCGAAGATTAGGAAGAATCC 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGAGCACGATTGGATTTGCCGAAGATTAGGAAGAATCC 888
Query 609 ACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAATGCTTGTACCTACTGCAAAACTAAACACGCCAGAG 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAATGCTTGTACCTACTGCAAAACTAAACACGCCAGAG 962
Query 683 GAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATAGAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAG 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATAGAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAG 1036
Query 757 ATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAA 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAA 1110
Query 831 ACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATC 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATC 1184
Query 905 TGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCTACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCC 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCTACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCC 1258
Query 979 GACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTGGCTGACTTCAAAAGAGTAGTGGATTTTCTGAAAGA 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTGGCTGACTTCAAAAGAGTAGTGGATTTTCTGAAAGA 1332
Query 1053 GAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTGTGGTTTTCCTGGAGAAACAGATCAGGATTTTCAAG 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTGTGGTTTTCCTGGAGAAACAGATCAGGATTTTCAAG 1406
Query 1127 AAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTTTATTAACCAATTTTACCCAAGACCAGGAACT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTTTATTAACCAATTTTACCCAAGACCAGGAACT 1480
Query 1201 CCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAAAGGACAAAAGATCTTTCTCGGGTGTTTCA 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAAAGGACAAAAGATCTTTCTCGGGTGTTTCA 1554
Query 1275 TTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACAACAAGTGTTAGTAACAGAAGAATCTTTTGATTCCA 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACAACAAGTGTTAGTAACAGAAGAATCTTTTGATTCCA 1628
Query 1349 AGTTTTATGTTGCACACAATCAATTCTATGAGC----------------------------------------- 1381
|||||||||||||||||||||||||||||||||
Sbjct 1629 AGTTTTATGTTGCACACAATCAATTCTATGAGCAGATAAGAGGTGAAAATGTTTGCTATGGATCATGGCTGGAA 1702
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1703 TTAGAGCTTGAGAAGATGCTGAAGGCCAAGGTGGACAAGTCGGATGAGGGATGGGCAGAGGAAGCAGGCTGCCT 1776
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1777 GTGTCAGAAGGCAGGAAAGCAGGAGCTGAAGAGGCCCCCAGCATTGACATTCCCCAGGGAATCATCTCAGACTG 1850
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1851 GGCAGTGCGTCCCCAGGAAACAGGGGAGCTTTTCAAAGCCCAGACTAAACGTGCTCTGTTCAGTACCGGTGGAG 1924
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1925 ACTGCAGTTGAGGAAGGGCTCCCAGCACTCCATGTCTGGCCTGCATCGCTTCCCCATTTCCCCATCTCATTAAT 1998
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 1999 ATACCCCAGAGGGCCATTTTCCTATTCAGGCCAACCTTCTGCTCAGCCCTGGGGAGGAGCTTGATTGCATTTTG 2072
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2073 GTTGCCTCTTCTCTCTCCTTTCTCTTGCCATCTGGGTTTTGCCTCAGCAGGGAACTTTTTTCCCTTCATTTTAA 2146
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2147 AGGCAGTGGCATGCCTCGTTAGCTGCTTCCTCCAATTTAAAGCAGTCGGGCTTTTTCCAATTATTAAAACTGGA 2220
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2221 GGAGGGGAAAACACTGAGCCCTTCATTCAGATCAAGGCAGCAGATCAAGGAGGGTTATTTTTCCCCAGAATAGT 2294
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2295 ACCAAATCTCCCAGGGTTAGTTTGGTCTAGAGATTTTCTTATTTTATAAAAACTGATTTAAATGGGCTTTTTAT 2368
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2369 ATCCTAACACTAAAGCTCTTTTAGTTCTTTTTGCCTGCCCTAAGTAATTCACCACCCAGGTGACCTTTTTCTTC 2442
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2443 TACTTTGATGAAGCAGTGTACTCAGTGGTCATAAAAATCAAACTCAGACCAAGATTCAATTTTGCCTTTCAGAG 2516
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2517 AGATTGGCTGTGGAACTCCTGGCTCTCATCTGACTTTTCTGTCTCTATAACTAAGCATATCAAAGATTTTCTAG 2590
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2591 GAATTATTTTTCTAAATAAGATGAGTTCCAGAGATGAAGATTGTATCTAGATATCCAAGTATTACTGGATTAGA 2664
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2665 ACTGGTCTATTTATTTTGGATTCTAACTTGAAAAGACTGGCAAGTCGCTGCAGTGCTAAAATAGAAGTGTAAGG 2738
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2739 GAGACATCACACACACAAGCTACCTGTGGGTCCCAAAGGAAGGGAAACGTTTGCTTGAAGTAAACAAGTACTTT 2812
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2813 TATCAGGAATCTCTAGTGGAAAGAGACCACCTGACAGTTTCCTGTGAACAAGCCAAAGTACCCTTCAGAGGACT 2886
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2887 GGTTCTAGATGGAGGTAGATTCCCAGGACTGACAAACACATGCCTTTTCTAACAGAGCAAGGGAAATGAACGGC 2960
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 2961 AGCTGTTAGTTTCAGGAGTCATTTAGCTCCAAACAGCAGTGTACAGTGTTATTGGAAGGTTCTTTTAAATGTAC 3034
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3035 CTCCTTCTCCCTCAAAACACAGCACACACATGCACGGACACAAACACGCAGGCCTGTTTGAAGTGTCTTTTCAA 3108
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3109 ACCATTACTCTGACAGCTCACTTGGAAAGTATTAAAAGTATAAGGCTTTCATCAGTATTGTCTCGGTTTTCCTC 3182
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3183 ATTGCATGGAATAGCCAAAAGCAAGATATCAAAGGCCTGTCCAGAAGTGGCTGGCTGATTGCTGGGGGATTTCC 3256
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3257 CAGGTCTGCCTTCCACGTGCCTCAGGACATCAGGCACATCCTGCACTGGAAAAGCACTGCCCAGGGGCCCAGGA 3330
Query 1382 -------------------------------------------------------------------------- 1381
Sbjct 3331 GCCCCTCCCAGGAGTGCCTTTCCTTCCTGCAGGCTCTGCAGACCCTTGAGCAGCTAGAAGATAGAGTCCACTTT 3404
Query 1382 -----------------------------------------------------------AGGTTTTAGTGCCAA 1396
|||||||||||||||
Sbjct 3405 GTAGGGGATCCCAGAACAGAAAAATGACATTGAGGGACAATGAGGAAACCTGGATAATTAGGTTTTAGTGCCAA 3478
Query 1397 AGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAG 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 AGAACCCTGCGTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAG 3552
Query 1471 CCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGAC 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 CCAGTATCTGATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGAC 3626
Query 1545 AAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGACT 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 AAAGGACTTCAGAAATGGGCTTGGGAACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGACT 3700
Query 1619 CAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTG 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 CAGCGAGTTCCAGAATGGTGCTGCCCATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTG 3774
Query 1693 GCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAAT----------------------------- 1737
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GCTCTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAACATCTATAA 3848
Query 1738 -------------------------------------------------- 1737
Sbjct 3849 AGAAGAATACATTTCTAATTAAAATCTTCAATGAACAGGAAAGCGACATC 3898
