Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03547
- Subject:
- NR_024252.1
- Aligned Length:
- 2155
- Identities:
- 325
- Gaps:
- 1801
Alignment
Query 1 ATGGCGCCCGAGGAGAACGCGGGGAGCGAACTCTTGCTGCAGAGTTTCAAGCGCCGCTTCCTGGCAGCGCGCGC 74
|||||||||.|||||||||||||.||.||||||.|
Sbjct 1 ---------------------------------------CAGAGTTTCGAGCGCCGCTTCCTAGCGGCGCGCAC 35
Query 75 CCTGCGCTCCTTCCGCTGGCA---------------GAGCTTAGAAGC--------------AAAGT------- 112
.|||||||||||||.|||||| ||||..|||.|| .||||
Sbjct 36 ACTGCGCTCCTTCCCCTGGCAGGTGGGCGGCGGGGCGAGCGGAGAGGCCTGCGGGGCTTGCGGAAGTCCAGGGG 109
Query 113 -------------------------------------------------------------------------- 112
Sbjct 110 CAGACGGGATGGGTCTCCCTGCTGAAACCCCCGGCGCTCCTGCCACCACGAGGCTGTCCACACGGAGCTTTTGG 183
Query 113 --------TA------------AGAGA--CTCAT---CA--GATTC--------------TGAGC----TGCTG 141
|| ||||| ||.|| || ||.|| .|||| |||||
Sbjct 184 ACGAGCTGTACGAGGCGCTGGCAGAGACCCTGATGGCCAAGGAGTCCACCCAGGGCCACTGGAGCTATTTGCTG 257
Query 142 C----------------------------------------------------------------------GGG 145
| |||
Sbjct 258 CCCTCGGAAGGCTCGGTCACACTCTCCGAGCACAGCCATCATCTCCCACGGTACCACAGGCCTGGTCACATGGG 331
Query 146 A----------TATTTTGCAGA----------------------------------AGACGTGCTGTATTGCCC 175
| ||..||||||| ||||||||||||||||||
Sbjct 332 ACGCTGCCCGCTACCTTGCAGAATGGGCCATCAAGAACCTGGCAGCCTTCACTAACAGACGTGCTGTATTGCCC 405
Query 176 AGAAGCCATCGTGTCGCTGGTCGGGGTCCTGCGGAGGCTGGCTGCCTGCCGGGAGCACCAGCGGGCTCCTCAAT 249
|||||||||||||||.|||||||||||||||||||||||||||||||||.||||||||||||||||||||.|..
Sbjct 406 AGAAGCCATCGTGTCCCTGGTCGGGGTCCTGCGGAGGCTGGCTGCCTGCTGGGAGCACCAGCGGGCTCCTGAGG 479
Query 250 TCTACATGGCCCTTACCGTCTGCAACCCAGAGATGTGCCAGCTGTTCACCACCGAGCTATGCTGGACTGGGATC 323
|||||||||||.||||||||.||||||||||||.|||||||.|||||||||||||||||.|||||.||||||||
Sbjct 480 TCTACATGGCCTTTACCGTCCGCAACCCAGAGACGTGCCAGGTGTTCACCACCGAGCTAGGCTGGGCTGGGATC 553
Query 324 AGATGGGAAGCGGAAGCTCATCATGACCAGAAACTGTTTCCCTACAGAGAGCACTTGGAGATGGCAAAGC---- 393
||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||||||||||.||
Sbjct 554 AGATGGGAAGCGGAAGCTCATCATGACCAGAAACTGTTTCCCTATGGAGAGCACTTGGAGATGGCAATGCTGAA 627
Query 394 -------------------------------------------------------------------------- 393
Sbjct 628 CCTCACACTGTAGGACTCATACACGACTCCAACGGGATTGTTAGAATCAAATCACTCTCGTGGGAAGAATTTTT 701
Query 394 -------------------------------------------------------------------------- 393
Sbjct 702 ATATGGGAAAGCGGATAAAACTTTCATTGGACTGGAATGTTTGGAGAATGTTAAATTCCAAATCAGGAACCACA 775
Query 394 -------------------------------------------------------------------------- 393
Sbjct 776 ATCTGCCCTCTAATAAGACATCGGCTATCTAAGCATGTGGGTGCCCCCTTTCTGCCAGCAGTTCTGGTTCTTAA 849
Query 394 -------------------------------------------------------------------------- 393
Sbjct 850 GAAAATCACCATAAATCAGACATGAAAATTCTGGCTCCAAAAATAGCATTTTCTTTGTGCAAATAAAAACGTGT 923
Query 394 -------------------------------------------------------------------------- 393
Sbjct 924 GTATCAAGTATGACGTTCCCCCAACGTGGACACACTCGGTTCCTCACAAAGCCAAGCCCGCTGCAGCTGCCACA 997
Query 394 -------------------------------------------------------------------------- 393
Sbjct 998 TCCCTGGACACACTCGGTTCCTCACAAAGCCAAGCTCGCTGCAGCTGCCACATCCCTGGACACATTCGGTTCCT 1071
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1072 CACAAAGCCAAGCCCGCGGCAGCTGCCACATCCCTGGACACACTCGGTTCCTCACAAAGCCAAGCCCGCTGCAG 1145
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1146 CTGCCACATCCCTGGGCTTGTGGTGCAGCAGGTGCTTTTCTCAAGACAGGAATCAAAGTGTTAGGAACATGGCA 1219
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1220 GAAAGGTGACACCTGGAGACCAAATGCAGGATGAGGAGTACTGCAGAGGTCACAGGGAAGTCACAGAACAGTAA 1293
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1294 TACGCTAGCAGGGACATGGGGCGTGAAGAACAGAAGAAGACAGGAAGCATTTCTGAGACTCCAAAGAAGAAATC 1367
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1368 AGGGCCAACCACAGCTTCCCGGGTCATTCACCAGGTGGCACCACTGCCGTCATTTCAGCTTCTGGCCACTGGGA 1441
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1442 GGCGCTGCTTGAAAGGGTTTGCCCTGAGACTCCAAGAAGAAGCTGCGGGAAGGACAGCAGGGGCCCTGGGGTTT 1515
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1516 TAGCCTCTGGCCCAGGAGTTATGTGTCCATAACCAAAGGGAGCACAGTCTGCACCCAGCTCTCATCCCATCAGA 1589
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1590 GCTGCTGCGACTCCCGCAGGTTCTTCCGGAACTGGTTTAGCTTGCCTTCAGGATCAGGAAAGTTTGAGAAAAGC 1663
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1664 ATCTGCAAAATACTGAAGAGCAGAGCTTACCTCATTGCCTGTCCCCACCCCATCCCAGGTCACCACCTGGATGA 1737
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1738 CCCCAGCTCCCCGACCCAACAACAACCCCTCCCAAGTCCCTAGCTCCCTCACTTGGACTTGAGACCCTTCACAC 1811
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1812 CCCAGCAGCGCTCCGCCTCCATCTTGACATGCTTTCTGGAAACTTCCCCGTATGTCCCACTTTCCCACACTTGG 1885
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1886 TGCCCTGGAGCACCTTCCGGCCTCTACATGATGTACGTTCCCCTGTGAGCACCCTCCTCTCGGCCTCTGGCCAA 1959
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1960 CACAGTCCCACCCATCTGTGGGTAACAAGGGGGTGTTCTTTTCAGCCTTGCTAAACTGTCTGAATCAAGGATCA 2033
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2034 CAAACTACAGCCTGCAGGCCAAATCCAGCCCACAGCCTGTGTTTGTAAATAAAGCTTTATTGGAACAAAGCCAC 2107
Query 394 --------- 393
Sbjct 2108 ACCCCTTAA 2116
