Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03571
- Subject:
- NR_073122.1
- Aligned Length:
- 3139
- Identities:
- 330
- Gaps:
- 2789
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTGGGCCCCCGCGGCGTGACGCGAGCACGGCGGCTCCGCCCCCTGCGTCTCGGGCCTCGCTGGCCTTGGGG 74
Query 1 -------------ATGGCGTCAATGCAGAAACGACTACAGAAAGAACTGTTGGCTTTGCAAAATGACCCACCTC 61
||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||
Sbjct 75 GGATGGTTTCATCATGGCGTCAATGCAGAAACGACTACAAAAAGAACTGTTGGCTTTGCAGAATGACCCACCTC 148
Query 62 CTGGAATGACCTTAAATGAGAAGAGTGTTCAAAATTCAATTACACAGTGGATTGTAGACATGGAAGGTGCACCA 135
||||||||||.||||||||.|||||||||||.||||||||.||.||
Sbjct 149 CTGGAATGACTTTAAATGAAAAGAGTGTTCAGAATTCAATCACGCA---------------------------- 194
Query 136 GGTACCTTATATGAAGGGGAAAAATTTCAACTTCTATTTAAATTTAGTAGTCGATATCCTTTTGACTCTCCTCA 209
Sbjct 195 -------------------------------------------------------------------------- 194
Query 210 GGTCATGTTTACTGGTGAAAATATTCCTGTTCATCCTCATGTTTATAGCAATGGTCATATCTGTTTATCCATTC 283
||||||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 195 -GTCATGTTTACTGGTGAAAATATTCCCATTCATCCTCATGTGTATAGCAATGGTCATATCTGTTTATCCATTC 267
Query 284 TAACAGAAGACTGGTCCCCAGCGCTCTCAGTCCAATCAGTTTGTCTTAGCATTATTAGCATGCTTTCCAGCTGC 357
|||||||||||||||||||.|||||||||||.||.|||||.|||||.||||||||.||||||||||||||||||
Sbjct 268 TAACAGAAGACTGGTCCCCGGCGCTCTCAGTGCAGTCAGTCTGTCTCAGCATTATCAGCATGCTTTCCAGCTGC 341
Query 358 AAGGAAAAGAGACGACCACCGGATAATTCTTTTTATGTGCGAACATGTAACAAGAATCCAAAGAAAACAAAATG 431
||.|||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 AAAGAAAAGAGACGACCACCAGATAATTCCTTTTATGTGCGAACATGTAACAAGAATCCAAAGAAAACAAAATG 415
Query 432 GTGGTATCATGATGATACTTGT---------------------------------------------------- 453
|||||||||||||||.||||||
Sbjct 416 GTGGTATCATGATGACACTTGTTGATGCCGCTGCCCTCCTCCTGTAGCAGAAGATAGTCCTACTGAGAAATGAG 489
Query 454 -------------------------------------------------------------------------- 453
Sbjct 490 CACTTTGATCATTCAGTCTTTGAACTTTAACCTTTGACTGGAAGTGACCTATAGGCAATGAAGACTACTTCCTT 563
Query 454 -------------------------------------------------------------------------- 453
Sbjct 564 TTACTGCATTTTTACTCGTGTGCATTCTGGGCGCATGTTGATCGCTGGTTCAGTCCAGTCAACCGACATGCTTT 637
Query 454 -------------------------------------------------------------------------- 453
Sbjct 638 TATTAGTCATACAGTATTAATGCAGGTGTCAGGAAATGTCAACTATAATTCCATTTTTTATTTTTATTTTTTTA 711
Query 454 -------------------------------------------------------------------------- 453
Sbjct 712 AGCTTTTGGAAAAGTTCCAGGTCCTCGTGTATTGTGCAATAACAGTGACTTCCTCAGTGGTTTGGGGACGTTCA 785
Query 454 -------------------------------------------------------------------------- 453
Sbjct 786 TTGCCGGCAATGGACGTTGTAAAAGGAAGAGTTTTCTTAACTCCTGCCACTTGGTGATTAATGCATGATAGGGC 859
Query 454 -------------------------------------------------------------------------- 453
Sbjct 860 CTATGAAATGAATTTATCAGTTGTTGTGGGATTATAAGGAAAGTGAGGGATCCAACATTACATTGAAAGCCACC 933
Query 454 -------------------------------------------------------------------------- 453
Sbjct 934 CCAATTGTTTATATTTGGATTCTATGCACTGTGATCCTAAGGCCAACAGCATGAAATTACATGCATCTTTAAAG 1007
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1008 GACCGAAAGAAAGATCATTGCATATTTATTTAATTGTTTATATCTGCTGTCAAATTGTTTTGACATGGAAAGTT 1081
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1082 TTCGAGGAACATTGGCAGAGAGGTACAATATGTTATCCCTATGGTGAAAATAAATTCATTTGTTGTATATACTC 1155
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1156 CTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTGGATGGTTAACCAAGGTGTTGTTTGGAAGTAAAAGAA 1229
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1230 AAAATGGCAGTGATGATTAAATTACTGCCATCCATCATTTGGGCCTGTTATTATTTTTCCAAGTATATTATACT 1303
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1304 CTGTTACTTCCTGCTAGCCATCAGCATGAGCCCTATTGCCTAAACACTATTTCATTTATTTATGTTTGGAAAAA 1377
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1378 ATCCATAAACATTTTTGTTTGTAATCTTGTTTCTTTTGTTATGTTTTCAGTTGTTTAAATGTTATAATACTTTA 1451
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1452 ATTGAAAGAATTTTGTCAAGTTTTTTTTTCTTGTAAATTTTCTTTACTTGTATCATCTTGTCCTTCAATACTGT 1525
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1526 ACCCTAAAATAAGAAATACATTTTTGACAGAGGCTTAATGTTTTAACAAAAGAGTGTGGACATTTTTATTTTAA 1599
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1600 GATTTTGGTAAAAGGATACTATAAAAACAATGTTTGCTTATTTGTCTCACTTACCCATTGTGTAGGGTTTCTTG 1673
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1674 GAAGAACTTGTTTTGTTTGTTGAGAAGATTTTGCCTACAGTTAGATGAAGTTTTTCTGTCTGCCTGTCTGTCTG 1747
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1748 TCTCTACTCTTATCTATCTGTATGTATGTAGGTATCTATCTATCATCTCTCTCTCTGATCTATAAAACAATTGT 1821
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1822 TGAGAAGGTTCCATCCTAAATACCATGTACCATGTAATGATTATATAACTAGGTCTTTTTAAGAAGTGATTAAT 1895
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1896 GTATTTTATAAATTACCTTTTCACATATGCAAGCTCTGTTTCTATGACAATGTTATTTTTACTGATGCCTTACT 1969
Query 454 -------------------------------------------------------------------------- 453
Sbjct 1970 GTTATAGTCTTTTTGAATATCCTGCAGTGAATATATTAATCAATTTGGGCTAAAAATAAAAGCCAGTTGGCTGA 2043
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2044 AAGGTCTGACGGTATGTAAACCCATAAAAAAATCATTCAACTGATAATTGGTAAAGAATATTTTAAAAATTGTT 2117
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2118 TTTAACCTCTGTGTAGATGACATTTTGTAGCTTTTTACATGTTGTTAATTAAGGGCATATAATTTTACACTCTA 2191
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2192 AAAGTATAACTGCTGAACTCAGGGGTGGGTAGACTTCAAAAATATGTCTACTGTAGAAATAACTTGAAAAAAAT 2265
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2266 TAAATCCATGGCCAGCCACCAAATTGTGGACACTGTTTATAAAACTAGGGAGCAATCATCATTTTTTAAAGATT 2339
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2340 ATAAACGTTTTCTTCTGTCTTGACTGCATGTATATAAGTTCCCACAGTAACCATTATCAGTTTTATTAGTTGGC 2413
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2414 CTTCTTGACATGAAAAAAATCTTTACGTTCTTACGTTTCTTCTGCTTTTACGATGAAATCACAGCTGTAAGTTA 2487
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2488 AGTTTATGTCACTGCTCTAAATATTAATTAGCTCTTTTGTCGGGTTGGGGACACAGGGAGAAACACTTACCTAT 2561
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2562 CCGTGGTCCTCTTACTAAAATCCTGGCCTGTGACGTCACTCACCGAAGGAGCTCCCACACCAGGTCAGCAGCAA 2635
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2636 CAGTGCTGGAATGTAGATCACCAGCTTCCGTTGTGCTTTTATAACAGTGCTTTACTATACCTCTCTCTATGCAG 2709
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2710 ACACTGTAGGGCAGACGCAAATGAAATGGGAAATAGGGAAAAACCAAACACTTTTGCTTCATGTTTGGTACCAA 2783
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2784 GAGAAGAAATTAAAAATATATCTAAAATAGTGGAGCATCAACTATTACTAATTCATAATTAGATTAATATTACT 2857
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2858 CCTTTGAATTTAGAAGCCACTGAAAATTCTTTTACACTTGCATTTAATTATTTGTCATTATTAAGAGTCATAAG 2931
Query 454 -------------------------------------------------------------------------- 453
Sbjct 2932 ATGTGTATCTGGGTCATTGTTCTGTTGAGGGCAAGTTATAAAACAAATATTTTGCTGTAATGTTAACTACTGAA 3005
Query 454 ------------------------------- 453
Sbjct 3006 AGAGCCAGAATTACAAGAAATGCATATGAAA 3036
