Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03646
- Subject:
- NR_163917.1
- Aligned Length:
- 4545
- Identities:
- 438
- Gaps:
- 4107
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGGCGCGCAGGACCGCGGGCATTTACCCGTGCTTTCCCAAGCCTGGAAGAACTCGTCATGCTCTTTGTAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGCTTCTGTTGCTCACAGAGGTGCCTGCTTCCCCTTCTGCCATGATTGGAAGTTTCCTGAGGCCTCCCCAG 148
Query 1 --------------------------------------------------ATGATGTGGCAAAAGTATGCAGGA 24
||||||||||||||||||||||||
Sbjct 149 CCATGTGGAACTGACAACTTGCCTTTGATGATTTTCAAGAGAGTTGTGCTATGATGTGGCAAAAGTATGCAGGA 222
Query 25 AGCAGGCGGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACGGTGTGTTCTATGCCGGGGGCTTTGCCATTGT 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCAGGCGGTCAATGCCTCTGGGAGCAAGGATCCTTTTCCACGGTGTGTTCTATGCCGGGGGCTTTGCCATTGT 296
Query 99 GTATTACCTCATTCAAAAGTTTCATTCCAGGGCTTTATATTACAAGTTGGCAGTGGAGCAGCTGCAGAGCCATC 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTATTACCTCATTCAAAAGTTTCATTCCAGGGCTTTATATTACAAGTTGGCAGTGGAGCAGCTGCAGAGCCATC 370
Query 173 CCGAGGCACAGGAAGCTCTGGGCCCTCCTCTCAACATCCATTATCTCAAGCTCATCGACAGGGAAAACTTCGTG 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCGAGGCACAGGAAGCTCTGGGCCCTCCTCTCAACATCCATTATCTCAAGCTCATCGACAGGGAAAACTTCGTG 444
Query 247 GACATTGTTGATGCCAAGTTGAAGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCTCTACGTCCACTCATC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACATTGTTGATGCCAAGTTGAAGATTCCTGTCTCTGGATCCAAATCAGAGGGCCTTCTCTACGTCCACTCATC 518
Query 321 CAGAGGTGGCCCCTTTCAGAGGTGGCACCTTGACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGATTCCTG 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGAGGTGGCCCCTTTCAGAGGTGGCACCTTGACGAGGTCTTTTTAGAGCTCAAGGATGGTCAGCAGATTCCTG 592
Query 395 TGTTCAAGCTCAGTGGGGAAAACGGTGATGAAGTGAAAAAGGAG------------------------------ 438
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGTTCAAGCTCAGTGGGGAAAACGGTGATGAAGTGAAAAAGGAGTAGAGACGACCCAGAAGACCCAGCTTGCTT 666
Query 439 -------------------------------------------------------------------------- 438
Sbjct 667 CTAGTCCATCCTTCCCTCATCTCTACCATATGGCCACTGGGGTGGTGGCCCATCTCAGTGACAGACACTCCTGC 740
Query 439 -------------------------------------------------------------------------- 438
Sbjct 741 AACCCAGTTTTCCAGCCACCAGTGGGATGATGGCCTCCCTATTCCCTGAGACACAACAGTATTGAAATTGGGCC 814
Query 439 -------------------------------------------------------------------------- 438
Sbjct 815 AATTAATAACCCCACAGTGGCCTCTCACTAAATGTGAGAGGTGAGGAAGCTGCAGGAGAAAATTTGAAGCTAGC 888
Query 439 -------------------------------------------------------------------------- 438
Sbjct 889 AGTGTTCATGAGATGTAAGTAAAGAAGCCATCTCCATAAAAGTACAACGTGACGCAGCAAGTGCTGATGGAGAA 962
Query 439 -------------------------------------------------------------------------- 438
Sbjct 963 GCTGTAGAAGTTACACAGAAGATCTAGCTTGGACCATCGATGAAAGTGGCTACACTAAACAACAGATTTTAAAT 1036
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1037 GTAGATAAAACAGCATTTTATTGGAAAAAGATGCCATCTAGGACTTTCATAGTTAGAAAAACTCAATGCCTGGC 1110
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1111 TTCAAAGGACAAGCTGACTCTTGTCAGGGGCTAGTGCAGCTGTGACTTTCAGTTAAAGCCAATGCTCATTGACT 1184
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1185 ATTCTGAAAATCCCAGGGCCCTTAAGATATGCTGTATAAACGCAACAACAAAGCCTGGATGACGTTGGGTCTGT 1258
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1259 TTACAGCCTGGTCTACTGAGTAAGCCCACTGTTGAGACCTAGTGCTCAGAAAAAATAGATTTCTTTCAAAATAT 1332
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1333 GGCTGGGTGCAGTGGCTCACACCGGTAATCCCAGCACTTTGGGAGGCTGGGGCGGGTGGATTGCTTGATGCCAG 1406
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1407 GAGTTCAAGACCAGCCTGGGCAACATGGTGAAACCCTGTCTCAAAAAACAAATCCAAAAAACCAAAATATTGCT 1480
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1481 ACTCATTAACAATGCACCTGGTTACCCAAGAGCTCTGATGGAGATGTACAAGGAGATGAATACTGTTTTCATGC 1554
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1555 CTGCTAACACAGTATCCATTCTGCTGCTGATAGATCAAGAAGTACTTTTGACTTTCAAAACTTGTTATTTAAGA 1628
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1629 AATACATTTTGTGGTTTCTCTGATGGTTCTGGGCAGTCAGTTCAAAACCTTCTGGAAAGGATTCACCATTCTAG 1702
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1703 ATGCCATCAAGAGCATTCAATTCACGGGAGGAGGTCAAAATATCAACATTAATTGGAATTTGGAAGAAATAGAT 1776
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1777 TCCAATCCTCATGGAGGACTTGGAGGGTTTCAAGACTTCAGAGGAGGAAGGAACTGTAGATGGGCTGAAAATAG 1850
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1851 CAAGAGAACTAGAAGTGGAGGGGCCTAGAGATGTGACCGAATTGCTGTAACCTCAGGATCAAACTTGTATGGAT 1924
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1925 GAGAAGTTCCTTCTCATGGACGAGCAAAGAAGGTGATTTCTTGAAATGGAATCTACTCCTGGTGAAGATGCTAT 1998
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1999 GAACATTGTTGAAATGACAAAAGATTTAGAATATTCCATAAACTTAGCTGTGGCCAGGGTTTGAGAGGATTGAC 2072
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2073 TCCTAATTTTGAAGTTCTACTGTGGGTAAATGCTGTCAAACAGCATTGCATGCCACAGAGGAATCTCTCATGAA 2146
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2147 AGAGTTAATAAATGCAGCAAACTTCACTGTTGTCTTACTTTAAGAAACTGCCACAGTCACTGCAGGCTTCAGCA 2220
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2221 ACTTATCTTTTCCTACCCTCCTCTCGCATTTAAAAGTACTTTTAAATTAATGTATGTACATTATTTTTAGGCAT 2294
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2295 AACACTGCTGCTCATTTAAAAAAACTACAGTATGAACCATGTTATATGCAGTGGAAAGGCAAAAAATTCATGTG 2368
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2369 ACTTACTTGCTTGTATTTGGTTTATTGCAGTGGTCTGGAACTGAAAGTGATGCGTATTTCTGAGTTATGCCTGT 2442
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2443 ATTTAAGAAGCTGAGTGAAACCCAAAGAAGTCCATGATAGGACAGACTTCTGAAAACTAAAGACAGAAAAAAGC 2516
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2517 TTGAAAGCATCAAGAAAGAAGTGAAATCTTAGCTAGAGGGAAAAGTAACTCAGATGACAGTGGATTTCTCTCTG 2590
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2591 GAAACCATGGAGGCCAGAAGGAAGTGAGACAAGTTCTTTTAGTGCCAGAAGAACTATCAACTTGTGGCTGGGCA 2664
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2665 CGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAAGGTGGGCAGATCACTTGAAGTCAGGAGTTTGAG 2738
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2739 ACCAGCCTGGCCAACATGGCAAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCACATGC 2812
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2813 CTGTAATCTCAGCTACTTGGGAGGCTGAGGCACGAGAATTACTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCC 2886
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2887 AAGATCCTGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTGCCTCAAAACAAAACTCTGTCAACTCCAAA 2960
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2961 TTCCTATTTGGTGAAATGATCCTTCAGGATTGATGGGGTAATAAAAACATTCTCGGTTGATAGAAAACTAAAAG 3034
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3035 AATTTGTTGAATGAGTCTACCCTATAGACCTTGAAAAGACCAACCCTAAAGGAAGTTCTTGAACCAGAAAGGAA 3108
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3109 ACATTTAAAAAAAAAAAGTTTTGGGATGTCAGGAATAACGATGGAAACAGCAAAAATATGGGCACAGAATGACC 3182
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3183 TTCTTGGAGGGCATTTGCTTCTTCTAGTGCCTTTTCCATCCTGAAAGAAGGCTCTTGAATACTGCTCTGTGTCA 3256
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3257 ACCAGGGGTGCTTTAGACATTCTTCAGCAGTGGCTCGATCTCTGTAAAGATACATGTTTTACAGTTAAGACATG 3330
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3331 TTAGAACTTCAATTAAAATTAGAGCATAAGTTGCACCTGGACTTGATATGAAAGTAACCATCAGAAAATCAACA 3404
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3405 GAGATCTTAAACTTGCCTACCACAGACACCTGCAGGAATATACTAAGAATCATCATAGTGGACCTTTATTGTCT 3478
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3479 CCTGAGCACCCATTCTTTGTTCTTTCAGAAACACAACTGGTTTTGAGAATCCATCCCTTCTTCACTCAGTCCAC 3552
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3553 GTAAAGGTTAGGATGGTAGAAAGTGTTATACCTCTTCCTCCAGAGTTGGAGCCTATGACACTGATGACACTGGC 3626
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3627 ATGGAAAGCCAAAGCCCTACACCAACCAGCACACTTACTGGTTCCAAATTGATCTACGCTGGTGTAATCAGAGT 3700
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3701 GAATCTCAGAACTTTGGACAGAGCTGTGAGCAGAGACTGACTTTCCTGCTGTCTCCAGGTAGCTGCAAGGCTGA 3774
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3775 ACAGCAGCACCTACTTTATTACCATCTTACTGTCATTCAAAGAAGGCAGAGCTGAATGCTGGAGAAAAACTGAG 3848
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3849 TACTAGCAACAGTTTTTGAACCCTGAATACTGTCATAACTGAAGCTAGAATTATCCCTGGACTTGTTTGCCACT 3922
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3923 AAAATTTCCTTGTTTTGCTTACCCTGGTTTCAGCTGGCACCCTGATCACTTGAAAGGAACATAACTGATATACT 3996
Query 439 -------------------------------------------------------------------------- 438
Sbjct 3997 GTCCTTTGTTTTTCTTTCCTTCCTCTTCTCCGCCTTTGATGATTTTAAATTAGAAATCTACCTGCCTCTAATCT 4070
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4071 CTTTAATTTTCTCATTTATTTACTGCTGCCTATTTTCCAAAACACTGCTTCTCGAATATTCCTGGCTCAAAAAT 4144
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4145 CATCTATGTCTTCATGACATATGAAACCCCTAGAATCCAGCCTTTCCCCAGCTTTTAATATCTCCTAATTGATT 4218
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4219 TCTCAATTCCAGTGAAATGATTCCATTTATTTTTTTCCCAAACACATCACAAATATTCCTAACTCTTGTGAGCA 4292
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4293 ATTTTCTCTCATTCTTCTCAACTTATCTAAATCCTAACTTTTCAAAAGATCTAGCTCAAGTTCTGTCTTATCAT 4366
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4367 ATTTTGAGTTCCTTTCTTTGGCATTGTATTATTTTGTATCTTTCCATGTACACATGTGTGCATTATCTCCCTGA 4440
Query 439 -------------------------------------------------------------------------- 438
Sbjct 4441 TAAAACTAACTGGCTAGAGGATAGGAGTAAAGACTCAATTCTAATATCCTTGTTACCTAATAATACACAAACGT 4514
Query 439 ------------------------------- 438
Sbjct 4515 GAAACATGTTTGAATAAATCACTGTTAAATA 4545
