Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03707
- Subject:
- NM_018902.4
- Aligned Length:
- 2919
- Identities:
- 1744
- Gaps:
- 936
Alignment
Query 1 ----ATGGTTTCCAGATGTAGCTGCCTGGGGGTCCAGTGTCTGCTGCTCTCGCTTCTTCTCCTCGCAGCCTGGG 70
.||||||.|||| |.||..|..||||...||...|.||.|.|||||.||||||.|||||||.|..|||||
Sbjct 1 ATGTTTGGTTTTCAGA-GAAGGGGATTGGGCACCCCACGACTACAGCTCTGGCTTCTCCTCCTCGAATTCTGGG 73
Query 71 AGGTGGGGAGCGGCCAGCTCCACTACTCAGTCTACGAGGAGGCCAGACACGGCACCTTCGTGGGCCGCATCGCG 144
||||||||||||||||||||||||||||.||||..||||||||||.||||||||||||||||||||||||||||
Sbjct 74 AGGTGGGGAGCGGCCAGCTCCACTACTCCGTCTCGGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCG 147
Query 145 CAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAAGACACGGGGACCT 218
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.||||||||
Sbjct 148 CAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAACACATGGGGACCT 221
Query 219 TCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATTGACCGCGAGGAGCTGTGCGGGCGGA 292
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||
Sbjct 222 TCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGCGAGGAGCTGTGCGGGCAGA 295
Query 293 GCGTGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGAAGTG 366
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||
Sbjct 296 GCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGAACGTGGAGGTG 369
Query 367 AAGGACATTAACGACAACCCGCCCAGGTTCTCCGTAACAGAACAAAAGCTCTCAATACCTGAATCCAGACTGCT 440
|||||||||||||||||||||||...||||||..|.|.|||||||||||| .||||.|.|.||.| ||
Sbjct 370 AAGGACATTAACGACAACCCGCCGGTGTTCTCGCTCAGAGAACAAAAGCT-------GCTGATTGCGGAAT-CT 435
Query 441 --------TGACTCTCGATTTCCACTAGAAGGCGCATCTGATGCGGATGTTGGAGAGAACGC---ATTGCTTAC 503
.|||||.||.|||||||||||.||.||.||||||||.||..|||.||||||.|| |||| ||
Sbjct 436 AAGCAATCGGACTCGCGTTTTCCACTAGAGGGAGCTTCTGATGCTGACATTGAAGAGAATGCTCTATTG---AC 506
Query 504 TTACAAACTCAGTCCAAATGAGTATTTTGTTCTTGATATT-ATAAACAAA----AA--AGA--CAAAGACAAAT 568
.||||..||.|||..|||||||||||| |||||.|.||| |..|||||| || ||| .||||||
Sbjct 507 CTACAGGCTAAGTAAAAATGAGTATTT--TTCTTTAGATTCACCAACAAATGGTAAGCAGATTAAAAGAC---- 574
Query 569 TCCCAGTG---CTTGTTCTGCGGAAG-CTGCTGGATCGTGAAGAAAA-TCCTCAGCTAAAGTTGTTGTTGACAG 637
|| |||.||.|...|||| || ||||||.|.| |||||| |||..|.||.||.|||.||.|.||||
Sbjct 575 ------TGTCACTTATTTTAAAGAAGTCT-CTGGATAGAG-AGAAAACTCCGGAACTTAATTTGCTGCTAACAG 640
Query 638 CAACTGATGGAGGCAAACCTGAATTTACCGGATCTGTTTCTCTGCTGATCCTGGTGTTAGATGCCAATGATAAC 711
|.||.||.||.||.|||||.||..||||.||..|.|||...|||.|..|||..||.||.||||.|||.||.||.
Sbjct 641 CTACAGACGGGGGAAAACCAGAGCTTACTGGCACCGTTCGGCTGTTAGTCCAAGTCTTGGATGTCAACGACAAT 714
Query 712 GCCCCTATCTTTGACAGACCGGTTT-AT------GAAGTTAAGATG-----TAT-GAAAATCAAGTGAACCAAA 772
| ||| |||| |||| || |||..||||.|| ||| ||||||...|..||..|||
Sbjct 715 G-----ATC-----CAGA---GTTTGATAAATCAGAATATAAGGTGAGCCTTATGGAAAATGCTGCTAAAGAAA 775
Query 773 CATTAGTAATACGGCTC------AACGCTTCTGATTCG-GATGAAGGAATAAACAA-GGAAATGATGTATTCAT 838
|..|.|| |||| |||||..|.|| .|| ||.||||||.| ||| ||| ||.||| .|||
Sbjct 776 CTCTTGT------GCTCAAACTAAACGCCACAGA-CCGAGACGAAGGAGT---CAATGGA---GAGGTA-ACAT 835
Query 839 TTAGCTCTTTGGTCCCA------CCCACGATAAGAAGGAA-------ATTT----TGGAT-AAACGAAAGGACG 894
.|||.||..|..|| |||| |.|||| |||| |.||| |||..|| .
Sbjct 836 ---ACTCCTTAATGTCAATTAAGCCCA-------ATGGAAGACACTTATTTACACTAGATCAAAATAA-----T 894
Query 895 GGAGAAATAAAAGTAAATGATGCTATTGACTTTGAGGACAGTAACACTTATGAAATTCATGTAGATGTTACAGA 968
||||||.|.|..||.||||...||.|.||.|.|||.||.|..||...||||.|||||.|.|||.|.|.||||||
Sbjct 895 GGAGAAGTGAGGGTCAATGGAACTTTAGATTATGAAGAAAACAAGTTTTATAAAATTGAAGTACAGGCTACAGA 968
Query 969 TAAGGGAAACCCACCTATGGTTGGTCACTGCACGGTCCTAGTGGAACTACTGGATGAAAATGATAATTCACCTG 1042
||||||.|..||.||.||||..||||||||.||.|||...||||||.|..||||....||.|||||.||.||||
Sbjct 969 TAAGGGGACTCCCCCAATGGCAGGTCACTGTACAGTCTGGGTGGAAATCTTGGACACCAACGATAACTCTCCTG 1042
Query 1043 AGGTGATTGTCACTTCTCTGTCTCTCCCAGTGAAAGAAGATGCTCAAGTGG----GCACCGTCATTGCCCTAAT 1112
|.||....||.|||||..||||.||||||||...|||.||.||||| | ||||.|||||||||||.||
Sbjct 1043 AAGTCGCCGTGACTTCCTTGTCCCTCCCAGTACGAGAGGACGCTCA----GCCCAGCACGGTCATTGCCCTGAT 1112
Query 1113 CAGCGTTTCTGACCATGATTCAGGAGCCAACGGACAGGTCACCTGCTCTCTGACGCCTCACGTTCCGTTCAAGC 1186
||||||.|||||||.|||.|||||.|.||||||||||||.||||||||.||||||||.||||||||.|||||||
Sbjct 1113 CAGCGTGTCTGACCGTGACTCAGGTGTCAACGGACAGGTGACCTGCTCGCTGACGCCCCACGTTCCCTTCAAGC 1186
Query 1187 TGGTGTCCACCTACAAGAATTACTACTCATTGGTGCTGGACAGCGCTCTGGACCGCGAGAGGGTGTCGGCCTAT 1260
||||||||||||.|||||||||||||||.|||||||||||||||||.|||||||||||||..||||.|||||||
Sbjct 1187 TGGTGTCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGCGCCCTGGACCGCGAGAACGTGTGGGCCTAT 1260
Query 1261 GAGCTGGTGGTGACCGCGCGGGACGGGGGCTCGCCTCCGCTGTGGGCCACGGCCAGCGTGTCTGTGGAGGTGGC 1334
||.|||||||||||.||||||||.|||||.||||||.|.|||||||||||||||||.||.||.|||||||||||
Sbjct 1261 GAACTGGTGGTGACTGCGCGGGATGGGGGTTCGCCTTCTCTGTGGGCCACGGCCAGGGTATCCGTGGAGGTGGC 1334
Query 1335 CGACGTGAACGACAACGCGCCTGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACCCGCCAG 1408
|||||||||||||||.||||||||||||||.|||.||||||||||.|||||||||||||||||||||||.||||
Sbjct 1335 CGACGTGAACGACAATGCGCCTGCGTTCGCACAGCCCGAGTACACCGTGTTCGTGAAGGAGAACAACCCACCAG 1408
Query 1409 GCTGCCACATCTTCACGGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCTCTGGTG 1482
||||||||||||||||.|||||.|||.|||||||||||||||||||||||||.||||||||||||||.||||||
Sbjct 1409 GCTGCCACATCTTCACAGTGTCGGCGCGGGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTG 1482
Query 1483 GAGCGGCGGTTGGGCGAGCGCTCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCT 1556
|||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1483 GAGCGGCGGTTGGGCGACCGCGCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCT 1556
Query 1557 GCAGCCGCTGGACCACGAGGAGCTGGAGCTGCTACAGTTC---------------------------------- 1596
|||||||.||||||||||||||||||||||||||||||||
Sbjct 1557 GCAGCCGTTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGCGCGATGCGGGCGTGCCGCCTC 1630
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1631 TGAGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGGCGACTCAG 1704
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1705 GCTGGCAGCGCGGGAGGCGCAGTTAACAAGCTAGTACCGCGGTCGGTGGGTGCGGGCCACGTGGTGGCGAAGGT 1778
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1779 GCGCGCAGTGGATGCGGACTCAGGCTACAACGCGTGGCTTTCATATGAATTGCAGCCGGCGGCGGGCGGCTCGC 1852
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1853 GCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATAAGCACAACGCGTGCCCTGGACGAGGCAGACTCGCCG 1926
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 1927 CGCCACCGACTTCTAGTACTGGTGAAGGATCACGGTGAGCCGGCGCTGACGGCCACGGCCACCGTGCTGGTGTC 2000
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2001 GTTGGTGGAGAGCGGACAGGCGCCAAAGGCCTCTTCCCGGACTTTGGCGGGCGCCGCGAGCCCAGAGGCTGCGC 2074
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2075 TGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGTGGTGTCCAGCCTCCTGGTACTCACGCTGCTGCTG 2148
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2149 TATACGGCGCTGTGGTGGTCGGCAACGCCCACTGAGGGCGCGTGCGCGCCGGGGAAGCCCACGCTGGTGTGCTC 2222
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2223 CCGCGCGGTGGGGAGCTGGTCATACTCGCAGCAGAGGCGGCAGAGGGTGTGCTCTGAGGAGGGCCCACCTAAGA 2296
Query 1597 -------------------------------------------------------------------------- 1596
Sbjct 2297 CGGACCTCATGGCCTTCAGCCCCAGTCTTCCTCTAGGTCTGAATAAAGAGGAGGAAGGGGAAAGACAGGAGCCA 2370
Query 1597 ------------------CAGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAGGCAT 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2371 GGGTCAAATCACCCCGGACAGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAGGCAT 2444
Query 1653 GCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAA 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2445 GCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAA 2518
Query 1727 CAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAAC 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2519 CAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAAC 2592
Query 1801 AGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTAT 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2593 AGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTAT 2666
Query 1875 CCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAA 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2667 CCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAA 2740
Query 1949 CCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAAAGAG 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2741 CCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAAAGAG 2814
Query 2023 AAAGGGAACAGCACGACTGACAACAGTGACCAG 2055
|||||||||||||||||||||||||||||||||
Sbjct 2815 AAAGGGAACAGCACGACTGACAACAGTGACCAG 2847
