Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03707
Subject:
NM_018906.3
Aligned Length:
2925
Identities:
1749
Gaps:
945

Alignment

Query    1  ATG--GTT-TCC--------AGATGTAGCTGCCTGGGGGTCCAGTGTCTGCTGCTCTCGCTTCTTCTCCTCGCA  63
            |||  ||| |||        ||||       ||| ||.|.||||||.||||||||.||.|||||.|||||||||
Sbjct    1  ATGTTGTTCTCCTGGCGAGAAGAT-------CCT-GGAGCCCAGTGCCTGCTGCTTTCTCTTCTGCTCCTCGCA  66

Query   64  GCCTGGGAGGTGGGGAGCGGCCAGCTCCACTACTCAGTCTACGAGGAGGCCAGACACGGCACCTTCGTGGGCCG  137
            ||||.||||||||||||||||||||||||||||||.||||..||||||||||..||.|||||||||||||||||
Sbjct   67  GCCTCGGAGGTGGGGAGCGGCCAGCTCCACTACTCCGTCTCTGAGGAGGCCAAGCATGGCACCTTCGTGGGCCG  140

Query  138  CATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAAGACACG  211
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  141  CATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCCGGGTGGCGTCCAAAAGACACG  214

Query  212  GGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATTGACCGCGAGGAGCTGTGC  285
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||
Sbjct  215  GGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATAGACCGCGAGGAACTGTGC  288

Query  286  GGGCGGAGCGTGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGT  359
            ||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  289  GGGCGGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGAGGT  362

Query  360  GGAAGTGAAGGACATTAACGACAACCCGCCCAGGTTCTCC-------GTAACAGAACAAAAGCTCTCAATACCT  426
            ||||||||||||||||||.||||||.|| ||||.||.|||       ||||      |.||.||.|..||..|.
Sbjct  363  GGAAGTGAAGGACATTAATGACAACGCG-CCAGTTTTTCCAATGGCTGTAA------AGAATCTGTTTATTTCC  429

Query  427  GAATCCAGACTGCTTGACTCTCGATTTCCACTAGAAGGCGCATCTGATGCGGATGTTGGAGAGAACGCATTGCT  500
            ||||||.|||.||.||.||||||.|||.|.|||||.||||||||.|||||.|||.|.|||...||..|.|||.|
Sbjct  430  GAATCCCGACAGCCTGGCTCTCGGTTTTCGCTAGAGGGCGCATCAGATGCAGATATCGGAACAAATTCGTTGTT  503

Query  501  TACTTACAAAC-TCAGTCCAAATGAGTATTTTGTTCTT-GATATTATAAACAAAAAAGACAAAGACA--AATTC  570
            .|||||||..| |.|.||| |.|||.|||||| ..||| ||..||   ||.|.|||.||..|.||.|  ||.||
Sbjct  504  GACTTACAGTCTTGATTCC-ACTGAATATTTT-ACCTTGGACGTT---AAAAGAAATGATGAGGAAATTAAATC  572

Query  571  CCAGTGCTTGTTCTGCGGAAGCTGCTG------------GATCGTGAAGAAAATCCTCAGCTAAAGTTGTTGTT  632
            |     ||||..|| ||     ||.||            .||||.||.||.|.||||.|||...|.||..|..|
Sbjct  573  C-----CTTGGACT-CG-----TGTTGAAAAAAAATTTAAATCGAGAGGACACTCCTAAGCATTATTTACTAAT  635

Query  633  GACAGCAACTGATGGAGGCAAACCTGAATTTACCG----GATCTGTTTCTCTGCT---GATC-CTGGTGTTAGA  698
            .|||||||.||||||.||.|||||.||..|.||.|    ||       |||..||   |||| || ||.|||||
Sbjct  636  AACAGCAATTGATGGTGGGAAACCAGAGCTCACTGGCACGA-------CTCAACTAAAGATCACT-GTTTTAGA  701

Query  699  TGCCAATGATAACGCCCCTATC-TTTGACAGACCGGTTTATGAAGTTAAGATGTA--TGAAAATCAAGTGAACC  769
            ||..||.||.|||||||| |.| |||||.||..||.|.|||.||| |.|||| ||  .|||||     ||.|||
Sbjct  702  TGTAAACGACAACGCCCC-AGCGTTTGAGAGGACGATCTATAAAG-TCAGAT-TACTCGAAAA-----TGCACC  767

Query  770  AA-----ACATTAGTAAT-ACGGCTCAACGCTTCTGATTCGGATGAAGGAATAAACAAGGAAATGATGTATTCA  837
            ||     ||..||||..| ||.| |.|||||..|.||||.||||||||||.||||.|||||.||...|||||| 
Sbjct  768  AAATGGTACCCTAGTGGTGACCG-TTAACGCCACCGATTTGGATGAAGGAGTAAATAAGGATATCGCGTATTC-  839

Query  838  TTT------------------AGCTCTTTGGTCCCACCCACGATAAGAAGGAAAT----TTTGGATAAACG--A  887
            |||                  ||.|.||..|||                 .||||    |||.|||..| |  |
Sbjct  840  TTTCAATACGGACATGTCAGCAGATATTCTGTC-----------------AAAATTCCATTTAGATCCA-GTCA  895

Query  888  AAGGACGGGAGAAATAAAAGTAAATGATGCTATTGACTTTGAGGACAGTAACACTTATGAAATTCATGTAGATG  961
            |.||||     ||||.|..|||||.|.|...||.||.||.|||||.|||||..|.||||||||.||.|||||.|
Sbjct  896  ATGGAC-----AAATCAGTGTAAAGGGTAACATAGATTTCGAGGAAAGTAAGTCATATGAAATCCAGGTAGAAG  964

Query  962  TTACAGATAAGGGAAACCCACCTATGGTTGGTCACTGCACGGTCCTAGTGGAACTACTGGATGAAAATGATAAT  1035
            ..||.|||||.|||||.||.||.|||...|.|||||||||.||.|||.|.|||.|..||||....|||||||||
Sbjct  965  CCACGGATAAAGGAAATCCCCCAATGTCAGATCACTGCACAGTTCTACTCGAAATTGTGGACATCAATGATAAT  1038

Query 1036  TCACCTGAG---GTGATTGTCACTTCTCTGTCTCTCCCAGTGAAAGAAGATGCTCAAGTGGGCACCGTCATTGC  1106
            ..|||||||   ||.||  ||| .||.||.|||.|.||.||...||||||..|||.|.|..||||.|||||.||
Sbjct 1039  GTACCTGAGTTAGTTAT--TCA-ATCACTATCTTTACCTGTATTAGAAGACTCTCCACTTAGCACAGTCATCGC  1109

Query 1107  CCTAATCAGCGTTTCTGACCATGATTCAGGAGCCAACGGACAGGTCACCTGCTCTCTGACGCCTCACGTTCCGT  1180
            .||.||||||||.||.||||..||.|||||||.|||.|||||||||||||||||.||||||||.|||||.||.|
Sbjct 1110  TCTGATCAGCGTGTCCGACCGCGACTCAGGAGTCAATGGACAGGTCACCTGCTCGCTGACGCCCCACGTCCCCT  1183

Query 1181  TCAAGCTGGTGTCCACCTACAAGAATTACTACTCATTGGTGCTGGACAGCGCTCTGGACCGCGAGAGGGTGTCG  1254
            ||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||.||||||
Sbjct 1184  TCAAGCTGGTGTCCACCTTCAAGAATTACTACTCATTGGTGCTGGACAGCCCTCTGGACCGCGAGAGCGTGTCG  1257

Query 1255  GCCTATGAGCTGGTGGTGACCGCGCGGGACGGGGGCTCGCCTCCGCTGTGGGCCACGGCCAGCGTGTCTGTGGA  1328
            ||||||||||||||||||||.||.||||||||||||||||||.|.|||||||||||||||||||||||.|||||
Sbjct 1258  GCCTATGAGCTGGTGGTGACTGCTCGGGACGGGGGCTCGCCTTCACTGTGGGCCACGGCCAGCGTGTCCGTGGA  1331

Query 1329  GGTGGCCGACGTGAACGACAACGCGCCTGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACC  1402
            |||||||||||||||||||||.|||||.||.|||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1332  GGTGGCCGACGTGAACGACAATGCGCCGGCATTCTCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACC  1405

Query 1403  CGCCAGGCTGCCACATCTTCACGGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCT  1476
            ||||.|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.
Sbjct 1406  CGCCGGGCTGCCACATCTTCACGGTGTCTGCGCGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCG  1479

Query 1477  CTGGTGGAGCGGCGGTTGGGCGAGCGCTCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTA  1550
            ||||||||.||||||.||||.||||||.||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1480  CTGGTGGAACGGCGGGTGGGGGAGCGCGCGCTGTCGAGCTACGTGTCGGTACACGCGGAGAGCGGCAAGGTGTA  1553

Query 1551  CGCGCTGCAGCCGCTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAG-------------------------  1599
            ||||||||||||||||||||||||||||||.||||||||.|||||||||                         
Sbjct 1554  CGCGCTGCAGCCGCTGGACCACGAGGAGCTAGAGCTGCTGCAGTTCCAGGTGAGTGCGCGCGATGCGGGCGTGC  1627

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1628  CGCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGATG  1701

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1702  CCTCGGGTGGGTGGCATCGGTGGCGCAGTGAGCGAGCTGGTGCCGCGGTCAGTGGGTGCGGGCCACGTGGTAGC  1775

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1776  GAAGGTGCGCGCAGTGGATGCAGACTCAGGCTACAACGCGTGGCTTTCGTATGAGCTGCAGCCTGGGACCGGCG  1849

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1850  GTGCGCGCATCCCGTTTCGCGTGGGGCTGTACACGGGAGAGATCAGCACGACCCGTGCCCTGGACGAGGTGGAC  1923

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1924  GCCCCGCGCCATCGCCTACTGGTGCTGGTGAAGGACCACGGTGAACCCTCATTGACCGCCACGGCCACTGTGCT  1997

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1998  GGTGTCGCTGGTGGAGAGTGGCCAGGCACCCAAGGCCTCGTCCCAGGCGTCCGCTGGCGCCACGGGCCCGGAAG  2071

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2072  CTGCACTGGTGGATGTCAACGTGTACTTGATCGTCGCCATCTGCGCGGTGTCCAGTCTGTTGGTGCTCACACTG  2145

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2146  CTGCTATATACTGCTCTGCGGTGCTCCGCGCCGCCAACCGAAGGCGACTGTGGGCCGGGCAAGCCCACGCTGGT  2219

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2220  GTGCTCCAGCGCGGTGGGGAGCTGGTCATACTCGCAGCAGAGGCAGCAGAGGGTGTGCTCTGGAGAGGGGTTGC  2293

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2294  CCAAGACCGACCTCATGGCTTTTAGCCCTAGCCTTCCTCCTTGTCCAATTAGCCGGGATAGAGAGGAGAAACAG  2367

Query 1600  ---------------------------CCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGC  1646
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368  GATGTGGACGTTGATCTCTCAGCCAAACCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGC  2441

Query 1647  AGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGT  1720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2442  AGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGT  2515

Query 1721  GGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAAC  1794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2516  GGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAAC  2589

Query 1795  AGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATT  1868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2590  AGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATT  2663

Query 1869  CATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACT  1942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2664  CATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACT  2737

Query 1943  TCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAA  2016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2738  TCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAA  2811

Query 2017  AAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCAG  2055
            |||||||||||||||||||||||||||||||||||||||
Sbjct 2812  AAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCAG  2850

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