Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03707
- Subject:
- NM_018906.3
- Aligned Length:
- 2925
- Identities:
- 1749
- Gaps:
- 945
Alignment
Query 1 ATG--GTT-TCC--------AGATGTAGCTGCCTGGGGGTCCAGTGTCTGCTGCTCTCGCTTCTTCTCCTCGCA 63
||| ||| ||| |||| ||| ||.|.||||||.||||||||.||.|||||.|||||||||
Sbjct 1 ATGTTGTTCTCCTGGCGAGAAGAT-------CCT-GGAGCCCAGTGCCTGCTGCTTTCTCTTCTGCTCCTCGCA 66
Query 64 GCCTGGGAGGTGGGGAGCGGCCAGCTCCACTACTCAGTCTACGAGGAGGCCAGACACGGCACCTTCGTGGGCCG 137
||||.||||||||||||||||||||||||||||||.||||..||||||||||..||.|||||||||||||||||
Sbjct 67 GCCTCGGAGGTGGGGAGCGGCCAGCTCCACTACTCCGTCTCTGAGGAGGCCAAGCATGGCACCTTCGTGGGCCG 140
Query 138 CATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAAGACACG 211
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 141 CATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCCGGGTGGCGTCCAAAAGACACG 214
Query 212 GGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATTGACCGCGAGGAGCTGTGC 285
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||
Sbjct 215 GGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATAGACCGCGAGGAACTGTGC 288
Query 286 GGGCGGAGCGTGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGT 359
||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 289 GGGCGGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGAGGT 362
Query 360 GGAAGTGAAGGACATTAACGACAACCCGCCCAGGTTCTCC-------GTAACAGAACAAAAGCTCTCAATACCT 426
||||||||||||||||||.||||||.|| ||||.||.||| |||| |.||.||.|..||..|.
Sbjct 363 GGAAGTGAAGGACATTAATGACAACGCG-CCAGTTTTTCCAATGGCTGTAA------AGAATCTGTTTATTTCC 429
Query 427 GAATCCAGACTGCTTGACTCTCGATTTCCACTAGAAGGCGCATCTGATGCGGATGTTGGAGAGAACGCATTGCT 500
||||||.|||.||.||.||||||.|||.|.|||||.||||||||.|||||.|||.|.|||...||..|.|||.|
Sbjct 430 GAATCCCGACAGCCTGGCTCTCGGTTTTCGCTAGAGGGCGCATCAGATGCAGATATCGGAACAAATTCGTTGTT 503
Query 501 TACTTACAAAC-TCAGTCCAAATGAGTATTTTGTTCTT-GATATTATAAACAAAAAAGACAAAGACA--AATTC 570
.|||||||..| |.|.||| |.|||.|||||| ..||| ||..|| ||.|.|||.||..|.||.| ||.||
Sbjct 504 GACTTACAGTCTTGATTCC-ACTGAATATTTT-ACCTTGGACGTT---AAAAGAAATGATGAGGAAATTAAATC 572
Query 571 CCAGTGCTTGTTCTGCGGAAGCTGCTG------------GATCGTGAAGAAAATCCTCAGCTAAAGTTGTTGTT 632
| ||||..|| || ||.|| .||||.||.||.|.||||.|||...|.||..|..|
Sbjct 573 C-----CTTGGACT-CG-----TGTTGAAAAAAAATTTAAATCGAGAGGACACTCCTAAGCATTATTTACTAAT 635
Query 633 GACAGCAACTGATGGAGGCAAACCTGAATTTACCG----GATCTGTTTCTCTGCT---GATC-CTGGTGTTAGA 698
.|||||||.||||||.||.|||||.||..|.||.| || |||..|| |||| || ||.|||||
Sbjct 636 AACAGCAATTGATGGTGGGAAACCAGAGCTCACTGGCACGA-------CTCAACTAAAGATCACT-GTTTTAGA 701
Query 699 TGCCAATGATAACGCCCCTATC-TTTGACAGACCGGTTTATGAAGTTAAGATGTA--TGAAAATCAAGTGAACC 769
||..||.||.|||||||| |.| |||||.||..||.|.|||.||| |.|||| || .||||| ||.|||
Sbjct 702 TGTAAACGACAACGCCCC-AGCGTTTGAGAGGACGATCTATAAAG-TCAGAT-TACTCGAAAA-----TGCACC 767
Query 770 AA-----ACATTAGTAAT-ACGGCTCAACGCTTCTGATTCGGATGAAGGAATAAACAAGGAAATGATGTATTCA 837
|| ||..||||..| ||.| |.|||||..|.||||.||||||||||.||||.|||||.||...||||||
Sbjct 768 AAATGGTACCCTAGTGGTGACCG-TTAACGCCACCGATTTGGATGAAGGAGTAAATAAGGATATCGCGTATTC- 839
Query 838 TTT------------------AGCTCTTTGGTCCCACCCACGATAAGAAGGAAAT----TTTGGATAAACG--A 887
||| ||.|.||..||| .|||| |||.|||..| | |
Sbjct 840 TTTCAATACGGACATGTCAGCAGATATTCTGTC-----------------AAAATTCCATTTAGATCCA-GTCA 895
Query 888 AAGGACGGGAGAAATAAAAGTAAATGATGCTATTGACTTTGAGGACAGTAACACTTATGAAATTCATGTAGATG 961
|.|||| ||||.|..|||||.|.|...||.||.||.|||||.|||||..|.||||||||.||.|||||.|
Sbjct 896 ATGGAC-----AAATCAGTGTAAAGGGTAACATAGATTTCGAGGAAAGTAAGTCATATGAAATCCAGGTAGAAG 964
Query 962 TTACAGATAAGGGAAACCCACCTATGGTTGGTCACTGCACGGTCCTAGTGGAACTACTGGATGAAAATGATAAT 1035
..||.|||||.|||||.||.||.|||...|.|||||||||.||.|||.|.|||.|..||||....|||||||||
Sbjct 965 CCACGGATAAAGGAAATCCCCCAATGTCAGATCACTGCACAGTTCTACTCGAAATTGTGGACATCAATGATAAT 1038
Query 1036 TCACCTGAG---GTGATTGTCACTTCTCTGTCTCTCCCAGTGAAAGAAGATGCTCAAGTGGGCACCGTCATTGC 1106
..||||||| ||.|| ||| .||.||.|||.|.||.||...||||||..|||.|.|..||||.|||||.||
Sbjct 1039 GTACCTGAGTTAGTTAT--TCA-ATCACTATCTTTACCTGTATTAGAAGACTCTCCACTTAGCACAGTCATCGC 1109
Query 1107 CCTAATCAGCGTTTCTGACCATGATTCAGGAGCCAACGGACAGGTCACCTGCTCTCTGACGCCTCACGTTCCGT 1180
.||.||||||||.||.||||..||.|||||||.|||.|||||||||||||||||.||||||||.|||||.||.|
Sbjct 1110 TCTGATCAGCGTGTCCGACCGCGACTCAGGAGTCAATGGACAGGTCACCTGCTCGCTGACGCCCCACGTCCCCT 1183
Query 1181 TCAAGCTGGTGTCCACCTACAAGAATTACTACTCATTGGTGCTGGACAGCGCTCTGGACCGCGAGAGGGTGTCG 1254
||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||.||||||
Sbjct 1184 TCAAGCTGGTGTCCACCTTCAAGAATTACTACTCATTGGTGCTGGACAGCCCTCTGGACCGCGAGAGCGTGTCG 1257
Query 1255 GCCTATGAGCTGGTGGTGACCGCGCGGGACGGGGGCTCGCCTCCGCTGTGGGCCACGGCCAGCGTGTCTGTGGA 1328
||||||||||||||||||||.||.||||||||||||||||||.|.|||||||||||||||||||||||.|||||
Sbjct 1258 GCCTATGAGCTGGTGGTGACTGCTCGGGACGGGGGCTCGCCTTCACTGTGGGCCACGGCCAGCGTGTCCGTGGA 1331
Query 1329 GGTGGCCGACGTGAACGACAACGCGCCTGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACC 1402
|||||||||||||||||||||.|||||.||.|||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1332 GGTGGCCGACGTGAACGACAATGCGCCGGCATTCTCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACC 1405
Query 1403 CGCCAGGCTGCCACATCTTCACGGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCT 1476
||||.|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.
Sbjct 1406 CGCCGGGCTGCCACATCTTCACGGTGTCTGCGCGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCG 1479
Query 1477 CTGGTGGAGCGGCGGTTGGGCGAGCGCTCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTA 1550
||||||||.||||||.||||.||||||.||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1480 CTGGTGGAACGGCGGGTGGGGGAGCGCGCGCTGTCGAGCTACGTGTCGGTACACGCGGAGAGCGGCAAGGTGTA 1553
Query 1551 CGCGCTGCAGCCGCTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAG------------------------- 1599
||||||||||||||||||||||||||||||.||||||||.|||||||||
Sbjct 1554 CGCGCTGCAGCCGCTGGACCACGAGGAGCTAGAGCTGCTGCAGTTCCAGGTGAGTGCGCGCGATGCGGGCGTGC 1627
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 1628 CGCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGATG 1701
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 1702 CCTCGGGTGGGTGGCATCGGTGGCGCAGTGAGCGAGCTGGTGCCGCGGTCAGTGGGTGCGGGCCACGTGGTAGC 1775
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 1776 GAAGGTGCGCGCAGTGGATGCAGACTCAGGCTACAACGCGTGGCTTTCGTATGAGCTGCAGCCTGGGACCGGCG 1849
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 1850 GTGCGCGCATCCCGTTTCGCGTGGGGCTGTACACGGGAGAGATCAGCACGACCCGTGCCCTGGACGAGGTGGAC 1923
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 1924 GCCCCGCGCCATCGCCTACTGGTGCTGGTGAAGGACCACGGTGAACCCTCATTGACCGCCACGGCCACTGTGCT 1997
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 1998 GGTGTCGCTGGTGGAGAGTGGCCAGGCACCCAAGGCCTCGTCCCAGGCGTCCGCTGGCGCCACGGGCCCGGAAG 2071
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 2072 CTGCACTGGTGGATGTCAACGTGTACTTGATCGTCGCCATCTGCGCGGTGTCCAGTCTGTTGGTGCTCACACTG 2145
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 2146 CTGCTATATACTGCTCTGCGGTGCTCCGCGCCGCCAACCGAAGGCGACTGTGGGCCGGGCAAGCCCACGCTGGT 2219
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 2220 GTGCTCCAGCGCGGTGGGGAGCTGGTCATACTCGCAGCAGAGGCAGCAGAGGGTGTGCTCTGGAGAGGGGTTGC 2293
Query 1600 -------------------------------------------------------------------------- 1599
Sbjct 2294 CCAAGACCGACCTCATGGCTTTTAGCCCTAGCCTTCCTCCTTGTCCAATTAGCCGGGATAGAGAGGAGAAACAG 2367
Query 1600 ---------------------------CCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGC 1646
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 GATGTGGACGTTGATCTCTCAGCCAAACCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGC 2441
Query 1647 AGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGT 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2442 AGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGT 2515
Query 1721 GGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAAC 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2516 GGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAAC 2589
Query 1795 AGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATT 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2590 AGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATT 2663
Query 1869 CATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACT 1942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2664 CATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACT 2737
Query 1943 TCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAA 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2738 TCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAA 2811
Query 2017 AAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCAG 2055
|||||||||||||||||||||||||||||||||||||||
Sbjct 2812 AAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCAG 2850
