Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03707
- Subject:
- NM_018907.4
- Aligned Length:
- 2900
- Identities:
- 1740
- Gaps:
- 904
Alignment
Query 1 ATGG---TTTCCAGATGTAGCTGCCTGGGGGTCCAGTGTCTGCTGCTCTCGCTTCTTCTCCTCGCAGCCTGGGA 71
|||| |||||.|..|.|||.|||.||....||.|.||||||||||||..|||||||||||||||||||||||
Sbjct 1 ATGGAGTTTTCCTGGGGAAGCGGCCAGGAATCCCGGCGTCTGCTGCTCTTACTTCTTCTCCTCGCAGCCTGGGA 74
Query 72 GGTGGGGAGCGGCCAGCTCCACTACTCAGTCTACGAGGAGGCCAGACACGGCACCTTCGTGGGCCGCATCGCGC 145
||..||||.|||.||||||||||||||.||||.|||||||||||.|||||||||||||||||||||||||||||
Sbjct 75 GGCAGGGAACGGTCAGCTCCACTACTCGGTCTCCGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCGC 148
Query 146 AGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAAGACACGGGGACCTT 219
||||||||||.||||||||||||||||||||||.||||||||||||||||||||||||..|.|.|||.|.||||
Sbjct 149 AGGACCTGGGACTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCCGGGTGGCGTCCAAGGGCCGCGGAGGCCTT 222
Query 220 CTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATTGACCGCGAGGAGCTGTGCGGGCGGAG 293
|||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||.|||||||
Sbjct 223 CTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGGGAGGAGCTGTGCCGGCGGAG 296
Query 294 CGTGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGAAGTGA 367
||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 297 CGCGGAGTGCAGCATCCACCTGGAGGTGATCGTAGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGAGGTGA 370
Query 368 AGGACATTAACGACAACCCGCCCAGGTTCTCCGTAACAGAACAAAAGCTCTCAATACCTGAATCCAGACTGCTT 441
.||||||||||||.||||||||...||||.|.|.||||.||.|.||.||.||.||..|.||||||||.|.||||
Sbjct 371 GGGACATTAACGATAACCCGCCGGTGTTCCCAGCAACACAAAAGAACCTGTCCATCGCGGAATCCAGGCCGCTT 444
Query 442 GACTCTCGATTTCCACTAGAAGGCGCATCTGATGCGGATGTTGGAGAGAACGCATTGCTTACTTACAAACTCAG 515
||||||||.|||||||||||.|||||.||.|||||.|||.|.||.||||||||..||||.|||||||.|||.||
Sbjct 445 GACTCTCGGTTTCCACTAGAGGGCGCCTCGGATGCAGATATCGGGGAGAACGCCCTGCTCACTTACAGACTGAG 518
Query 516 TCCAAATGAGTATTTTGTTCTTGATATTATAAACAAAAAAGAC--AAAGAC--------AAA-----TTCCCAG 574
.||||||||.||.|||..|||.| |||||..|| .|.||| ||| || |
Sbjct 519 CCCAAATGAATACTTTTCTCTGG-----------AAAAACCACCTGATGACGAGCTGGTAAAAGGTCTT----G 577
Query 575 TGCTTGTTCTGCGGAAGCTGCTGGATC--------GTGAAGAAAATCCTCAGCTAAAGTTGT----TGTTGACA 636
.||||.|..|.||||| ||| |.||||||..|||..|| |.||.| ||.|.|||
Sbjct 578 GGCTTATATTACGGAA--------ATCTTTAGACAGAGAAGAAGCTCCGGAG----ATTTTTTTAGTGCTCACA 639
Query 637 GCAACTGATGGAGGCAAACCTGAATTTAC-----CGGATCTGTTTCTCTGCTGATCCTGGTGTTAGATGCCAAT 705
||.|||||||||||||||||.||.||.|| |.|.||.|||.||| |||...||..|.|||||||||
Sbjct 640 GCCACTGATGGAGGCAAACCCGAGTTGACTGGCACCGTTCAGTTACTC-----ATCACAGTACTGGATGCCAAT 708
Query 706 GATAACGCCCCTATC-TTTGACAGACCGGTTTATGAAGTTAAGATGTA--TGAAAAT----CAAGTGAACCAAA 772
||.||.||||| |.| |||||||||.|..||||| |||.|.|||| || .|||||| |.|.|| .||
Sbjct 709 GACAATGCCCC-AGCTTTTGACAGAACCATTTAT-AAGGTGAGAT-TACTAGAAAATGTTCCTAATG----GAA 775
Query 773 CATTAGTAATACGGCTCAACGCTTCTGATTCGGATGAAGGAATAAACAAGGAAATGATGTATTCATTTAGCTC- 845
||||.|||||....||.|||||.||.||||..||.||||||.|.||...|||.||..|.|||||||| |||
Sbjct 776 CATTGGTAATTAAACTTAACGCCTCAGATTTAGACGAAGGATTGAATGGGGACATTGTTTATTCATT---CTCA 846
Query 846 -------TTTGGTCCCACCCACGATAAGAA--GGAAATTTTGGATAAACGAAAGGACGGGAGAAATAAAAGTAA 910
|||.| ||| .||..||| ..||.|||...|||.|...||..||.|||.||||.|..||||
Sbjct 847 AATGATATTTCG--CCA-----AATGTGAAATCCAAGTTTCACATAGATCCAATTACTGGACAAATTATTGTAA 913
Query 911 A-TGATGCTATTGACTTTGAGGACAGTAACACTTATGAAATTCATGTAGATGTTACAGATAAGGGAAA---CCC 980
| .||| .||||||||||||.||.||.||..|.|||||||||..||||||.|..|..|||||||||.| |||
Sbjct 914 AGGGAT-ATATTGACTTTGAAGAAAGCAAATCCTATGAAATTATTGTAGAGGGCATTGATAAGGGACAGCTCCC 986
Query 981 ACCTATGGT-TGGTCACTGCACGGTCCTAGTGGAACTACTGGATGAAAATGATAAT-TCACCTGAGGTG--ATT 1050
||.| | |||.||.||.|..||..|.||||||.||...||..|.||.|||||| || ||.||..|| ||
Sbjct 987 ACTT----TCTGGCCATTGTAGAGTTATTGTGGAAGTAGAAGACAACAACGATAATGTC-CCAGATTTGGAAT- 1054
Query 1051 GTCACTTCTCTGTCTCTCCCAGTGAAAGAAGATGCTCAAGTGGGCACCGTCATTGCCCTAATCAGCGTTTCTGA 1124
|||..|||.|.||.||.|||.|.|.|||.||.||||.|.||||.||.|||||.|||||.||||||||.||.||
Sbjct 1055 -TCAAGTCTTTATCACTTCCAATTAGAGAGGACGCTCCACTGGGTACAGTCATCGCCCTGATCAGCGTGTCCGA 1127
Query 1125 CCATGATTCA--GGAGCCAACGGACAGGTCACCTGCTCTCTGACGCCTCACGTTCCGTTCAAGCTGGTGTCCAC 1196
|.|.|| || ||.|.|||.||.|.||||||||||||..|||||.|.|||||.||.|||||||||||||||||
Sbjct 1128 CAAAGA--CATGGGTGTCAATGGGCTGGTCACCTGCTCCTTGACGTCCCACGTCCCCTTCAAGCTGGTGTCCAC 1199
Query 1197 CTACAAGAATTACTACTCATTGGTGCTGGACAGCGCTCTGGACCGCGAGAGGGTGTCGGCCTATGAGCTGGTGG 1270
||.|||||||||||||||.||||||||||||||.||.||||||||||||||.|||||.||||||||||||||||
Sbjct 1200 CTTCAAGAATTACTACTCGTTGGTGCTGGACAGTGCCCTGGACCGCGAGAGCGTGTCAGCCTATGAGCTGGTGG 1273
Query 1271 TGACCGCGCGGGACGGGGGCTCGCCTCCGCTGTGGGCCACGGCCAGCGTGTCTGTGGAGGTGGCCGACGTGAAC 1344
||||||||||.|||||||||||||||.|||||||||||||||||||.||.||||||||||||||.||.||||||
Sbjct 1274 TGACCGCGCGAGACGGGGGCTCGCCTTCGCTGTGGGCCACGGCCAGTGTTTCTGTGGAGGTGGCTGATGTGAAC 1347
Query 1345 GACAACGCGCCTGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACCCGCCAGGCTGCCACAT 1418
||||||||.||.||||||||||||.||||||||||.||||||||||||||||||||||||||.|||||||||||
Sbjct 1348 GACAACGCTCCGGCGTTCGCGCAGCCCGAGTACACAGTGTTCGTGAAGGAGAACAACCCGCCGGGCTGCCACAT 1421
Query 1419 CTTCACGGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCTCTGGTGGAGCGGCGGT 1492
||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.|||||.|||||||||.
Sbjct 1422 CTTCACTGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTAGAGCGGCGGG 1495
Query 1493 TGGGCGAGCGCTCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGCTG 1566
|.||.||||||.||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1496 TAGGGGAGCGCGCGCTGTCGAGCTACGTTTCGGTGCATGCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGCTG 1569
Query 1567 GACCACGAGGAGCTGGAGCTGCTACAGTTCC------------------------------------------- 1597
||||||||||||||.||||||||.|||||.|
Sbjct 1570 GACCACGAGGAGCTAGAGCTGCTGCAGTTTCAGGTGACCGCTCGCGATGCCGGCGTGCCACCTCTGGGCAGCAA 1643
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 1644 CGTGACGCTGCAGGTGTTCGTGCTGGACGAAAACGACAACGCGCCAGCACTGCTAGCGCCTCGGGCGGGTGGCA 1717
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 1718 CTGGTGGCGCAGTGAGCGAGCTGGTGCCATGGTCGGTGGGTGTGGGCCACGTGGTGGCAAAGGTGCGCGCGGTG 1791
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 1792 GATGCTGACTCGGGCTACAACGCGTGGCTTTCGTACGAGCTGCAGCCGGGGACTGGTGGCGCGCGCATCCCGTT 1865
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 1866 CCGCGTGGGGCTGTACACTGGCGAGATCAGCACAACGCGTGCCCTGGACGAAACGGACGCTCCGCGCCACCGCC 1939
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 1940 TACTGGTACTGGTGAAGGACCACGGCGAGCCCGCGCTGACGGCCACGGCCACTGTGCTGGTGTCACTTGTGGAG 2013
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 2014 AGTGGACAGGCGCCAAAGGCCTCCTCACGGGCGTTGGTGGGCGCTGTGGGTCCCGATGCTGCGCTGGTGGATGT 2087
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 2088 CAACGTATACCTGATCATTGCCATCTGCGCGGTGTCCAGCCTTTTGGTGCTCACGCTGCTGCTGTACACCGCGC 2161
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 2162 TGCGGTGCTCTGCGCTGCCCACCGAGGGCGCGTGCGCTCCGGGCAAGCCCACGCTGGTGTGCTCCAGTGCGGTG 2235
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 2236 GGGAGCTGGTCATACTCGCAGCAGAGGAGGCCGAGGGTGTGCTCTGGTGAGGGCCCACCCAAGACCGACCTCAT 2309
Query 1598 -------------------------------------------------------------------------- 1597
Sbjct 2310 GGCCTTCAGCCCCAGTTTACCTGACTCTAGGGACAGAGAAGATCAGCTGCAGACAACTGAGGAATCCTTTGCAA 2383
Query 1598 AGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAGGCATGCACAGCTCTGTGCACCTA 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2384 AGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAGGCATGCACAGCTCTGTGCACCTA 2457
Query 1672 GAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACC 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2458 GAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACC 2531
Query 1746 AGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACG 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2532 AGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACG 2605
Query 1820 GACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATC 1893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2606 GACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATC 2679
Query 1894 ATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGA 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2680 ATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGA 2753
Query 1968 GACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACTG 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2754 GACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACTG 2827
Query 2042 ACAACAGTGACCAG 2055
||||||||||||||
Sbjct 2828 ACAACAGTGACCAG 2841
