Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03714
• Subject: NM_001354173.2
• Aligned Length: 1078
• Identities: 395
• Gaps: 641

Alignment

Query    1  ATGACTCTGGTTCTGTCCATGAATAGATTCTGCGAGCCCATTGTCTCGGAAGGAGCTGCTGAAATTGCTGGGTA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACTCTGGTTCTGTCCATGAATAGATTCTGCGAGCCCATTGTCTCGGAAGGAGCTGCTGAAATTGCTGGGTA  74

Query   75  CCAAACACTATGGGAGGCTGACAGCTACGGAGGCCCAAGCCCCCCAGGGCCAGCACAAGCTCCTTTGCAGGGAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCAAACACTATGGGAGGCTGACAGCTACGGAGGCCCAAGCCCCCCAGGGCCAGCACAAGCTCCTTTGCAGGGAG  148

Query  149  ACCGGGGAGCTGGTCCCCCACTGGCAGGATCACATTACAGGGGAATTTCAAATCCTATAACAACATCCAAGATC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACCGGGGAGCTGGTCCCCCACTGGCAGGATCACATTACAGGGGAATTTCAAATCCTATAACAACATCCAAGATC  222

Query  223  ACATACTTTAAGAGGAAGTATGTGGAAGAAGAGGATTTTCACCCACCACTCAGCAGCTGTAGCCATAAA-ACCA  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.||
Sbjct  223  ACATACTTTAAGAGGAAGTATGTGGAAGAAGAGGATTTTCACCCACCACTCAGCAGCTGTAGCCATAAAGAGCA  296

Query  296  TCTCAATTTTTGAGGAACGAGCCCACATCCTTTATATGTCCTTAGAAAAGCTAAAGTTTATCGATGATCCTGAA  369
            ...||      ||||         |||.|.|.||.|.|.|                       ||||.|.|.||
Sbjct  297  GAGCA------GAGG---------ACAACTTGTAGAAGAC-----------------------ATGACCATTAA  332

Query  370  GTGTACCTCCGAAGATCTGTCCTTATAAACAATTTGATGAAAAGGATCCATGGAGAAAT-----TATCATGCAG  438
            |.| ||.||  ||        |||...|||||.|..|.||.||||||.||.||    ||     |.|.||||||
Sbjct  333  GAG-ACATC--AA--------CTTCGCAACAAATATAAGACAAGGATACAAGG----ATTCCTATGTGATGCAG  391

Query  439  AATAACT-GGTGCTT---CCCTGCCTGCTCTTTCAATGGCACCTCTGCCCAAGAGTGGTTTATGGCTCAAGACT  508
                 || |||..||   .|||      |||..|||..|.|.||.||.|             .||||.|||   
Sbjct  392  -----CTAGGTTTTTATATCCT------TCTAACAAATGTATCTGTGAC-------------AGGCTGAAG---  438

Query  509  GCCCTTACCGAAAACGACCACGGATGGCCAAAGAGGAATGTGAAAAGTTTCATGCCTGCTGCTTTTACCAAGAA  582
                        |||||..||                                                     
Sbjct  439  ------------AACGATGAC-----------------------------------------------------  447

Query  583  TGTGGTGGCCACTACCTAAATTTACCCCTTTCTGTCAATGCTAATGTTGGAAGTGCCTCCACTGCTGCCTCCTC  656
                                                                                      
Sbjct  448  --------------------------------------------------------------------------  447

Query  657  TCCCTCCGCCTCTTCTTCCTCCTCATCTTCCTCTTCCTCTCCCCCTTTGCCTTTACCGAGTTGTTCCCGCCAGG  730
                                                                                      
Sbjct  448  --------------------------------------------------------------------------  447

Query  731  TGGATTTTGATGTAGGTAGTGCATCTATTTACAAGAGTGATGGCCAGATACCTGCCAATGAAATCTTTGTCACT  804
                                                                                      
Sbjct  448  --------------------------------------------------------------------------  447

Query  805  AATGTCAGATCACTTGGTGTTCAGGAAAAGGCCAAATTAAATGATGAGAAAGCAAATGATGACACCAACAGAGA  878
                                                                                      
Sbjct  448  --------------------------------------------------------------------------  447

Query  879  TGGTGGCCCCCTCAGCCACGAACCTGTGGGAAATGACCTTGCTTTTGAGTGCAAAGGCCAATTTTATGATTATT  952
                                                                                      
Sbjct  448  --------------------------------------------------------------------------  447

Query  953  TTGAGACCGGATATAATGAAAGAAACAATGTAAATGAATCTTGGAAAAAGTCCTTACGGAAAAAGGAGGCTTCA  1026
                                                                                      
Sbjct  448  --------------------------------------------------------------------------  447

Query 1027  CCACCAAGTAACAAACTGTGCTGCAGCAAAGGAAGTAAAATA  1068
                                                      
Sbjct  448  ------------------------------------------  447