Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03722
Subject:
XM_006528915.1
Aligned Length:
1761
Identities:
1200
Gaps:
381

Alignment

Query    1  ATGAAGTACATCCTGGTCACGGGTGGGGTCATCTCAGGCATTGGTAAAGGGATCATTGCCAGCAGCATTGGAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GATTCTAAAATCATGTGGACTCCGAGTTACTGCCATAAAAATCGACCCCTATATTAACATCGATGCTGGCACTT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTTCACCTTATGAACACGGTGAAGTCTTCGTCTTAAATGATGGTGGAGAAGTTGATTTAGACCTTGGAAATTAT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAAAGATTTTTGGATATTAATCTTTATAAAGACAACAATATCACCACGGGGAAGATATATCAGCATGTGATCAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TAAAGAGAGGCGTGGTGATTACCTGGGGAAAACAGTGCAAGTTGTCCCTCACATTACTGATGCTGTCCAGGAGT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGGTTATGAATCAAGCCAAGGTGCCGGTGGATGGTAATAAGGAAGAGCCCCAAATATGCGTTATTGAGCTGGGA  444
                 ||||||||||||||||||.|.||||||||.|||||||||||.|||||.|||||.|||||||||||||||
Sbjct    1  -----ATGAATCAAGCCAAGGTGTCTGTGGATGGCAATAAGGAAGATCCCCAGATATGTGTTATTGAGCTGGGA  69

Query  445  GGCACCATTGGAGACATCGAAGGAATGCCGTTTGTGGAGGCGTTTAGACAATTCCAGTTTAAGGCGAAAAGAGA  518
            |||||||||||||||||.|||||||||.|.||||||||.||.||..||||.|||||||||||.||.||.|.|||
Sbjct   70  GGCACCATTGGAGACATTGAAGGAATGGCATTTGTGGAAGCATTCCGACAGTTCCAGTTTAAAGCCAAGAAAGA  143

Query  519  GAATTTCTGTAATATCCACGTTAGCCTTGTCCCACAGCTCAGTGCTACCGGAGAACAAAAAACCAAACCCACCC  592
            ||||||||.||||||.||.||.||||||||.|||||||.|||||||||.|||||||||||||||||.|||||.|
Sbjct  144  GAATTTCTATAATATTCATGTCAGCCTTGTGCCACAGCCCAGTGCTACTGGAGAACAAAAAACCAAGCCCACGC  217

Query  593  AAAACAGCGTCCGCGCACTGAGGGGTTTAGGCCTGTCTCCAGATCTGATTGTCTGCCGAAGTTCAACGCCCATT  666
            |||||||.|||||.||.|||||.||.||.|||.|||||||.||||||||.||||||||.||||||||.||||||
Sbjct  218  AAAACAGTGTCCGTGCGCTGAGAGGGTTGGGCTTGTCTCCGGATCTGATCGTCTGCCGTAGTTCAACCCCCATT  291

Query  667  GAGATGGCCGTGAAGGAGAAGATTTCTATGTTTTGTCACGTGAACCCTGAACAGGTCATATGTATCCATGATGT  740
            ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  292  GAGATGGCTGTGAAGGAGAAGATTTCTATGTTTTGTCACGTGAACCCTGAACAGGTCATCTGTATCCATGATGT  365

Query  741  TTCTTCCACATACCGAGTTCCTGTGCTTTTAGAGGAACAAAGCATTGTGAAATATTTTAAGGAGAGATTGCACC  814
            ||||||||..||||||||.|||.|.|||||.|||||.|||.|..|.||.|||||||||.|.|||||||||..||
Sbjct  366  TTCTTCCATCTACCGAGTGCCTCTCCTTTTGGAGGAGCAAGGTGTGGTTAAATATTTTCAAGAGAGATTGGGCC  439

Query  815  TGCCCATCGGTGATTCTGCAAGTAATTTGCTTTTTAAGTGGAGAAATATGGCTGACAGGTATGAAAGGTTACAG  888
            ||||||||..|||||.|.||||||||||||||||.|||||||.|...|||||||||||||||||.||.||.|||
Sbjct  440  TGCCCATCAATGATTGTTCAAGTAATTTGCTTTTCAAGTGGAAAGCCATGGCTGACAGGTATGAGAGATTGCAG  513

Query  889  AAAATATGCTCCATAGCCCTGGTTGGCAAATACACCAAGCTCAGAGACTGCTACGCCTCTGTGTTCAAAGCCCT  962
            ||||||||.|||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||||||||.||
Sbjct  514  AAAATATGTTCCATAGCCCTGGTTGGTAAATACACCAAACTCAGGGACTGCTACGCCTCTGTGTTCAAAGCACT  587

Query  963  GGAACACTCAGCCCTGGCCATCAACCACAAGTTGAATCTGATGTACATAGACTCCATTGATCTGGAG-AAGATC  1035
            |||||||||||||.||||||||||||||||||||||.|||||||||||||||||||||||||||||| .|| ||
Sbjct  588  GGAACACTCAGCCTTGGCCATCAACCACAAGTTGAACCTGATGTACATAGACTCCATTGATCTGGAGCCAG-TC  660

Query 1036  ACTGAAACCGAGGACCCTGTGAAATTTCATGAAGCTTGGCAGAAGCTATGCAAAGCTGATGGTATTCTTGTGCC  1109
            ||..||.|||||||.|||||||||||.||||||||||||||||||||.|||..|||||||||.|||||||||||
Sbjct  661  ACCAAAGCCGAGGATCCTGTGAAATTCCATGAAGCTTGGCAGAAGCTGTGCTTAGCTGATGGGATTCTTGTGCC  734

Query 1110  TGGAGGCTTTGGAATCAGAGGAACATTGGGAAAACTCCAGGCGATTTCTTGGGCAAGGACAAAGAAGATTCCTT  1183
            .|||||.|||||||||.|||||||||||||||||||||||||.|||||.|||||||||||||||||||||||.|
Sbjct  735  CGGAGGGTTTGGAATCCGAGGAACATTGGGAAAACTCCAGGCAATTTCGTGGGCAAGGACAAAGAAGATTCCAT  808

Query 1184  TTCTGGGAGTTTGTCTTGGGATGCAACTAGCAGTGATAGAGTTTGCAAGAAACTGCCTTAACTTGAAAGATGCT  1257
            ||||||||.||||.||||||||||||||.||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct  809  TTCTGGGAATTTGCCTTGGGATGCAACTGGCAGTGATTGAGTTTGCAAGAAACTGCCTGAACTTGAAAGATGCT  882

Query 1258  GATTCCACAGAGTTTAGGCCAAATGCCCCAGTTCCTCTGGTGATTGATATGCCCGAGCACAACCCTGGCAATTT  1331
            .||||.|||||.|||..||||||..|.|||||.||..||||.|||||.|||||.||.||||||||||||.||||
Sbjct  883  AATTCTACAGAATTTGAGCCAAACACTCCAGTCCCATTGGTAATTGACATGCCTGAACACAACCCTGGCGATTT  956

Query 1332  GGGAGGAACAATGAGACTGGGAATAAGAAGAACTGTTTTCAAAACTGAAAATTCAATATTAAGGAAACTTTATG  1405
            |||||||||||||||||||||..|||||.||||||||||||.|||||||||.||.|||.|.|.|||.|||||||
Sbjct  957  GGGAGGAACAATGAGACTGGGGTTAAGACGAACTGTTTTCACAACTGAAAACTCCATACTGAAGAAGCTTTATG  1030

Query 1406  GTGATGTTCCTTTTATAGAAGAAAGACACAGACATCGGTTCGAGGTAAACCCTAACCTGATCAAACAATTTGAG  1479
            ||||.|||||||..|||||||||||||||.|||||||.|..|||||.|||||||||||||||||.|||||||||
Sbjct 1031  GTGACGTTCCTTACATAGAAGAAAGACACCGACATCGCTATGAGGTGAACCCTAACCTGATCAACCAATTTGAG  1104

Query 1480  CAGAATGACTTAAGTTTTGTAGGTCAGGATGTTGATGGAGACAGGATGGAAATCATTGAACTGGCAAATCATCC  1553
            .|.||.|||.|..|||||||.|||.|||||||.|||||..|.|||||||||||..||||..||.|||.||||||
Sbjct 1105  AATAAAGACCTTTGTTTTGTCGGTGAGGATGTAGATGGGAAGAGGATGGAAATTGTTGAGTTGACAAGTCATCC  1178

Query 1554  TTATTTTGTTGGTGTCCAGTTCCATCCTGAGTTTTCTTCTAGGCCGATGAAGCCTTCCCCTCCGTATCTGGGGC  1627
            .|||||..||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||||||
Sbjct 1179  ATATTTCATTGGTGTCCAGTTCCATCCTGAGTTTTCCTCTAGGCCAATGAAGCCTTCCCCTCCGTACCTGGGGC  1252

Query 1628  TGTTACTTGCAGCAACTGGGAACCTGAATGCCTACTTGCAACAGGGTTG--CAAACTGTCTTCCAGTGATAGAT  1699
            |.||||||||||||||.|||||.|||||||||.|..||||.||  |.||  |||.|||.|.|.|||||||.|||
Sbjct 1253  TCTTACTTGCAGCAACGGGGAATCTGAATGCCCATCTGCAGCA--GATGAACAAGCTGCCATACAGTGATGGAT  1324

Query 1700  ACAGTGATGCCAGTGATGACAGCTTTTCAGAGCCAAGGATAGCTGAGTTGGAAATAAGC  1758
            |||||||||||||.||||||||||||.|||||.|||.|.|.|||||..||||..|.|.|
Sbjct 1325  ACAGTGATGCCAGCGATGACAGCTTTCCAGAGGCAAAGCTTGCTGAACTGGATCTCAAC  1383

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