Nucleotide Global Alignment

Description

• Query: ccsbBroad304_03793
• Subject: NM_194052.3
• Aligned Length: 1179
• Identities: 952
• Gaps: 114

Alignment

Query    1  ATGGAAGACCTGGACCAGTCTCCTCTGGT---CTCGTCCTCGGACAGCCCACCCCGGCCGCAGCCCGCGTTCAA  71
            |||||||||.|.||||||||..|.|||||   |||||||.||||.|||||.||||||||.|.||||||.|||||
Sbjct    1  ATGGAAGACATAGACCAGTCGTCGCTGGTCTCCTCGTCCGCGGATAGCCCGCCCCGGCCCCCGCCCGCTTTCAA  74

Query   72  GTACCAGTTCGTGAGGGAGCCCGAGGACGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGACGAGGACGAAGACC  145
            ||||||||||||||.|||||||||||||||||||||.||.||.||.|||||.||||||||.||.|||||.||||
Sbjct   75  GTACCAGTTCGTGACGGAGCCCGAGGACGAGGAGGACGAGGAAGACGAGGAGGAGGAGGAGGACGACGAGGACC  148

Query  146  TGGAGGAGCTGGAGGTGCTGGAGAGGAAGCCCGCCGCCGGGCTGTCCGCGGCCCCAGTGCCCACCGCCCCTGCC  219
            |||||||..|||||||||||||||||||||||||.|||||||||||||||||.||.||||||         .||
Sbjct  149  TGGAGGAATTGGAGGTGCTGGAGAGGAAGCCCGCAGCCGGGCTGTCCGCGGCTCCGGTGCCC---------CCC  213

Query  220  GCCGGCGCGCCCCTGATGGACTTCGGAAATGACTTCGTGCCGCCGGCGCCCCGGGGACCCCTGCCGGCCGCTCC  293
            ||||.|||.||.|||.||||||||.|.|..||||..|||||.||.||||||||.||.||.|||||||||||.||
Sbjct  214  GCCGCCGCACCGCTGCTGGACTTCAGCAGCGACTCGGTGCCCCCCGCGCCCCGCGGGCCGCTGCCGGCCGCGCC  287

Query  294  CCCCGTCGCCCCGGAGCGGCAGCCGTCTTGGGACCCGAGCCCGGTGTCGTCGACCGTGCCCGCGCCATCCCCGC  367
            ||||..||||||.|||.||||||||||.|||||.|..|||||.|.|.|||         ||||||||||||.||
Sbjct  288  CCCCACCGCCCCTGAGAGGCAGCCGTCCTGGGAACGCAGCCCCGCGGCGT---------CCGCGCCATCCCTGC  352

Query  368  TGTCTGCTGCCGCAGTCTCGCCCTCCAAGCTCCCTGAGGACGACGAGCCTCCGGCCCGGCCTCCCCCTCCTCCC  441
            .|.|.||||||||||||..|||||||||||||||.|||||||||||||||||.||.|||      |||||..|.
Sbjct  353  CGCCCGCTGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACGACGAGCCTCCAGCGCGG------CCTCCGGCG  420

Query  442  CCGGCCAGCGTGAGCCCCCAGGCAGAGCCCGTGTGGACCCCGCCAGCCCCGGCTCCCGCCGCGCCCCCCTCCAC  515
            ||.|||.|||.||||||||..||.|||                           ||||||||||||||.|||||
Sbjct  421  CCAGCCGGCGCGAGCCCCCTAGCGGAG---------------------------CCCGCCGCGCCCCCTTCCAC  467

Query  516  CCCGGCCGCGCCCAAGCGCAGGGGCTCCTCGGGCTCAGTGGATGAGACCCTTTTTGCTCTTCCTGCTGCATCTG  589
            .|||||||||||||||||||||||   |||||||||||||                                  
Sbjct  468  GCCGGCCGCGCCCAAGCGCAGGGG---CTCGGGCTCAGTG----------------------------------  504

Query  590  AGCCTGTGATACGCTCCTCTGCAGTTGTTGACCTCCTGTACTGGAGAGACATTAAGAAGACTGGAGTGGTGTTT  663
                                   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  505  -----------------------GTTGTTGACCTCCTGTACTGGAGAGACATTAAGAAGACTGGAGTGGTGTTT  555

Query  664  GGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTATTCAGCATTGTGAGCGTAACAGCCTACATTGCCTTGGC  737
            |||||||||.|||||||||||||.||..|||||||.|||||||||||.||.|||||.|||||||||||||||||
Sbjct  556  GGTGCCAGCTTATTCCTGCTGCTGTCTCTGACAGTGTTCAGCATTGTCAGTGTAACGGCCTACATTGCCTTGGC  629

Query  738  CCTGCTCTCTGTGACCATCAGCTTTAGGATATACAAGGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCC  811
            |||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  630  CCTGCTCTCTGTGACTATCAGCTTTAGGATATATAAGGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCC  703

Query  812  ACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTATATCTGAGGAGTTGGTTCAGAAGTACAGTAATTCTGCT  885
            |||||||||||||||||.||||||||||||||||.|||||.|||||.|||||||||||.||.||||||||||||
Sbjct  704  ACCCATTCAGGGCATATTTGGAATCTGAAGTTGCCATATCAGAGGAATTGGTTCAGAAATATAGTAATTCTGCT  777

Query  886  CTTGGTCATGTGAACTGCACGATAAAGGAACTCAGGCGCCTCTTCTTAGTTGATGATTTAGTTGATTCTCTGAA  959
            |||||||||||||||.||||.|||||.|||.|.|||||.|||||||||||||||||||||||||||||.|||||
Sbjct  778  CTTGGTCATGTGAACAGCACAATAAAAGAATTGAGGCGTCTCTTCTTAGTTGATGATTTAGTTGATTCCCTGAA  851

Query  960  GTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGGTGCCTTGTTTAATGGTCTGACACTACTGATTTTGGCTC  1033
            |||||||||||||||||||||||||||.||.||||||||||||||.||||||.||||||||||||||||.||||
Sbjct  852  GTTTGCAGTGTTGATGTGGGTATTTACTTACGTTGGTGCCTTGTTCAATGGTTTGACACTACTGATTTTAGCTC  925

Query 1034  TCATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGGCACAGATAGATCATTATCTAGGACTTGCA  1107
            |.||.||||||||||||.||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  926  TGATCTCACTCTTCAGTATTCCTGTTATATATGAACGGCATCAGGCGCAGATAGATCATTATCTAGGACTTGCA  999

Query 1108  AATAAGAATGTTAAAGATGCTATGGCTAAAATCCAAGCAAAAATCCCTGGATTGAAGCGCAAAGCTGAA  1176
            ||.||||..|||||.|||||.|||||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1000  AACAAGAGCGTTAAGGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGAAGCGCAAAGCAGAA  1068