Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03793
- Subject:
- NR_135829.1
- Aligned Length:
- 2192
- Identities:
- 652
- Gaps:
- 1514
Alignment
Query 1 ATGGAAGACCTGGACCAGTCTCCTCTGGTCTCGTCCTCGGACAGCCCACCCCGGCCGCAGCCCGCGTTCAAGTA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCAGTTCGTGAGGGAGCCCGAGGACGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGACGAGGACGAAGACCTGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGAGCTGGAGGTGCTGGAGAGGAAGCCCGCCGCCGGGCTGTCCGCGGCCCCAGTGCCCACCGCCCCTGCCGCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGCGCGCCCCTGATGGACTTCGGAAATGACTTCGTGCCGCCGGCGCCCCGGGGACCCCTGCCGGCCGCTCCCCC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGTCGCCCCGGAGCGGCAGCCGTCTTGGGACCCGAGCCCGGTGTCGTCGACCGTGCCCGCGCCATCCCCGCTGT 370
||
Sbjct 1 ------------------------------------------------------------------------GT 2
Query 371 CTGCTGCCGCAGTCTCGCCCTCCAAGCTCCCTGAGGACGACGAGCCTCCGGCCCGGCCTCCCCCTCCTCCCCCG 444
.|||.|||.|| ||..||..||.|.|| .||||||||.||
Sbjct 3 GTGCAGCCCCA------------------------------GATGCTTTGGGCTGG----TCCCTCCTCTCC-- 40
Query 445 GCCAGCGTGAGCCCCCAGGCAGAGCCC-----GTGTGGACCCC---GCCA----GCCCCGGCTCCCGCCGCGCC 506
|||||.||| ||.| .||.||||..| ||.| ||||||.||
Sbjct 41 ----------GCCCCGAGG----GCGCTTTGTCTGCGGACTTCGGGGCGATGGCGCCCCGTCT----------- 89
Query 507 CCCCTCCACCCCGGCCGCGCCCAAGCGC-------AGGGGCTCCTCGGGCTCAGTGGATGAGACCCTTTTTGCT 573
||..| .|||||| |||| |.|||| |.|||||
Sbjct 90 ------------GGTTG----GAAGCGCGGGGAGAAGGG-----TGGGGC-----------GGCCCTT------ 125
Query 574 CTTCCTGCTGCATCTGAGCCTGTGATACGCTCCTCTGCAGTTGTTGACCTCCTGTACTGGAGAGACATTAAGAA 647
.||||| |.|||||||||||||||||||||||||||||||||||
Sbjct 126 --------------GGAGCC-----------------CGGTTGTTGACCTCCTGTACTGGAGAGACATTAAGAA 168
Query 648 GACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTATTCAGCATTGTGAGCGTAACAG 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 GACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTATTCAGCATTGTGAGCGTAACAG 242
Query 722 CCTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAAGGGTGTGATCCAAGCTATCCAG 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 CCTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAAGGGTGTGATCCAAGCTATCCAG 316
Query 796 AAATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTATATCTGAGGAGTTGGTTCAGAA 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 317 AAATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTATATCTGAGGAGTTGGTTCAGAA 390
Query 870 GTACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGGCGCCTCTTCTTAGTTGATGATT 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 391 GTACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGGCGCCTCTTCTTAGTTGATGATT 464
Query 944 TAGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGGTGCCTTGTTTAATGGTCTGACA 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 TAGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGGTGCCTTGTTTAATGGTCTGACA 538
Query 1018 CTACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGGCACAGATAGATCA 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 CTACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGGCACAGATAGATCA 612
Query 1092 TTATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAAGCAAAAATCCCTGGATTGAAGC 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 TTATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAAGCAAAAATCCCTGGATTGAAGC 686
Query 1166 GCAAAGCTGAA--------------------------------------------------------------- 1176
|||||||||||
Sbjct 687 GCAAAGCTGAATGAAAACGCCCAAAATAATTAGTAGGAGTTCATCTTTAAAGGGGATATTCATTTGATTATACG 760
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 761 GGGGAGGGTCAGGGAAGAACGAACCTTGACGTTGCAGTGCAGTTTCACAGATCGTTGTTAGATCTTTATTTTTA 834
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 835 GCCATGCACTGTTGTGAGGAAAAATTACCTGTCTTGACTGCCATGTGTTCATCATCTTAAGTATTGTAAGCTGC 908
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 909 TATGTATGGATTTAAACCGTAATCATATCTTTTTCCTATCTATCTGAGGCACTGGTGGAATAAAAAACCTGTAT 982
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 983 ATTTTACTTTGTTGCAGATAGTCTTGCCGCATCTTGGCAAGTTGCAGAGATGGTGGAGCTAGAAAAAAAAAAAA 1056
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1057 AAAAGCCCTTTTCAGTTTGTGCACTGTGTATGGTCCGTGTAGATTGATGCAGATTTTCTGAAATGAAATGTTTG 1130
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1131 TTTAGACGAGATCATACCGGTAAAGCAGGAATGACAAAGCTTGCTTTTCTGGTATGTTCTAGGTGTATTGTGAC 1204
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1205 TTTTACTGTTATATTAATTGCCAATATAAGTAAATATAGATTATATATGTATAGTGTTTCACAAAGCTTAGACC 1278
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1279 TTTACCTTCCAGCCACCCCACAGTGCTTGATATTTCAGAGTCAGTCATTGGTTATACATGTGTAGTTCCAAAGC 1352
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1353 ACATAAGCTAGAAGAAGAAATATTTCTAGGAGCACTACCATCTGTTTTCAACATGAAATGCCACACACATAGAA 1426
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1427 CTCCAACATCAATTTCATTGCACAGACTGACTGTAGTTAATTTTGTCACAGAATCTATGGACTGAATCTAATGC 1500
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1501 TTCCAAAAATGTTGTTTGTTTGCAAATATCAAACATTGTTATGCAAGAAATTATTAATTACAAAATGAAGATTT 1574
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1575 ATACCATTGTGGTTTAAGCTGTACTGAACTAAATCTGTGGAATGCATTGTGAACTGTAAAAGCAAAGTATCAAT 1648
Query 1177 ---------------------------------------------- 1176
Sbjct 1649 AAAGCTTATAGACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1694
