Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03793
- Subject:
- NR_135830.2
- Aligned Length:
- 2164
- Identities:
- 612
- Gaps:
- 1541
Alignment
Query 1 ATGGAAGACCTGGACCAGTCTCCTCTGGTCTCGTCCTCGGACAGCCCACCCCGGCCGCAGCCCGCGTTCAAGTA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCAGTTCGTGAGGGAGCCCGAGGACGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGACGAGGACGAAGACCTGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGAGCTGGAGGTGCTGGAGAGGAAGCCCGCCGCCGGGCTGTCCGCGGCCCCAGTGCCCACCGCCCCTGCCGCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGCGCGCCCCTGATGGACTTCGGAAATGACTTCGTGCCGCCGGCGCCCCGGGGACCCCTGCCGGCCGCTCCCCC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGTCGCCCCGGAGCGGCAGCCGTCTTGGGACCCGAGCCCGGTGTCGTCGACCGTGCCCGCGCCATCCCCGCTGT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTGCTGCCGCAGTCTCGCCCTCCAAGCTCCCTGAGGACGACGAGCCTCCGGCCCGGCCTCCCCCTCCTCCCCCG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GCCAGCGTGAGCCCCCAGGCAGAGCCCGTGTGGACCCCGCCAGCCCCGGCTCCCGCCGCGCCCCCCTCCAC--- 515
|||
Sbjct 1 --------------------------------------------------------------------CACATT 6
Query 516 --CCCGGCCGCGCCCAAGCGCAGGG---GCTCCTCGGGCTCAGTGGATGAGACCCTTTTTGCTCTTCCTGCTGC 584
|||..|||| ||.|.|||| ||.|||| |||||| || ||.|||
Sbjct 7 GACCCAACCGC-----AGTGAAGGGAGAGCGCCTC-----CAGTGG-TG-------------------TGGTGC 50
Query 585 ATCTGAG-CCTGTGA---------TACGCTCCTCTGCAGTTGTTGACCTCCTGTACTGGAGAGACATTAAGAAG 648
.| .||| ..||.|| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct 51 GT-GGAGAAATGGGAAGGAGAGAGT-------TCT---GTTGTTGACCTCCTGTACTGGAGAGACATTAAGAAG 113
Query 649 ACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTATTCAGCATTGTGAGCGTAACAGC 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 114 ACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTATTCAGCATTGTGAGCGTAACAGC 187
Query 723 CTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAAGGGTGTGATCCAAGCTATCCAGA 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 CTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAAGGGTGTGATCCAAGCTATCCAGA 261
Query 797 AATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTATATCTGAGGAGTTGGTTCAGAAG 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 AATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTATATCTGAGGAGTTGGTTCAGAAG 335
Query 871 TACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGGCGCCTCTTCTTAGTTGATGATTT 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 TACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGGCGCCTCTTCTTAGTTGATGATTT 409
Query 945 AGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGGTGCCTTGTTTAATGGTCTGACAC 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 AGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGGTGCCTTGTTTAATGGTCTGACAC 483
Query 1019 TACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGGCACAGATAGATCAT 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 TACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGGCACAGATAGATCAT 557
Query 1093 TATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAAGCAAAAATCCCTGGATTGAAGCG 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 TATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAAGCAAAAATCCCTGGATTGAAGCG 631
Query 1167 CAAAGCTGAA---------------------------------------------------------------- 1176
||||||||||
Sbjct 632 CAAAGCTGAATGAAAACGCCCAAAATAATTAGTAGGAGTTCATCTTTAAAGGGGATATTCATTTGATTATACGG 705
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 706 GGGAGGGTCAGGGAAGAACGAACCTTGACGTTGCAGTGCAGTTTCACAGATCGTTGTTAGATCTTTATTTTTAG 779
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 780 CCATGCACTGTTGTGAGGAAAAATTACCTGTCTTGACTGCCATGTGTTCATCATCTTAAGTATTGTAAGCTGCT 853
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 854 ATGTATGGATTTAAACCGTAATCATATCTTTTTCCTATCTATCTGAGGCACTGGTGGAATAAAAAACCTGTATA 927
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 928 TTTTACTTTGTTGCAGATAGTCTTGCCGCATCTTGGCAAGTTGCAGAGATGGTGGAGCTAGAAAAAAAAAAAAA 1001
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1002 AAAGCCCTTTTCAGTTTGTGCACTGTGTATGGTCCGTGTAGATTGATGCAGATTTTCTGAAATGAAATGTTTGT 1075
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1076 TTAGACGAGATCATACCGGTAAAGCAGGAATGACAAAGCTTGCTTTTCTGGTATGTTCTAGGTGTATTGTGACT 1149
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1150 TTTACTGTTATATTAATTGCCAATATAAGTAAATATAGATTATATATGTATAGTGTTTCACAAAGCTTAGACCT 1223
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1224 TTACCTTCCAGCCACCCCACAGTGCTTGATATTTCAGAGTCAGTCATTGGTTATACATGTGTAGTTCCAAAGCA 1297
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1298 CATAAGCTAGAAGAAGAAATATTTCTAGGAGCACTACCATCTGTTTTCAACATGAAATGCCACACACATAGAAC 1371
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1372 TCCAACATCAATTTCATTGCACAGACTGACTGTAGTTAATTTTGTCACAGAATCTATGGACTGAATCTAATGCT 1445
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1446 TCCAAAAATGTTGTTTGTTTGCAAATATCAAACATTGTTATGCAAGAAATTATTAATTACAAAATGAAGATTTA 1519
Query 1177 -------------------------------------------------------------------------- 1176
Sbjct 1520 TACCATTGTGGTTTAAGCTGTACTGAACTAAATCTGTGGAATGCATTGTGAACTGTAAAAGCAAAGTATCAATA 1593
Query 1177 ------------------ 1176
Sbjct 1594 AAGCTTATAGACTTAAAA 1611
