Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03794
- Subject:
- NM_020532.5
- Aligned Length:
- 3576
- Identities:
- 1119
- Gaps:
- 2457
Alignment
Query 1 ATGGAAGACCTGGACCAGTCTCCTCTGGTCTCGTCCTCGGACAGCCCACCCCGGCCGCAGCCCGCGTTCAAGTA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAAGACCTGGACCAGTCTCCTCTGGTCTCGTCCTCGGACAGCCCACCCCGGCCGCAGCCCGCGTTCAAGTA 74
Query 75 CCAGTTCGTGAGGGAGCCCGAGGACGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGACGAGGACGAAGACCTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCAGTTCGTGAGGGAGCCCGAGGACGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGACGAGGACGAAGACCTGG 148
Query 149 AGGAGCTGGAGGTGCTGGAGAGGAAGCCCGCCGCCGGGCTGTCCGCGGCCCCAGTGCCCACCGCCCCTGCCGCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGAGCTGGAGGTGCTGGAGAGGAAGCCCGCCGCCGGGCTGTCCGCGGCCCCAGTGCCCACCGCCCCTGCCGCC 222
Query 223 GGCGCGCCCCTGATGGACTTCGGAAATGACTTCGTGCCGCCGGCGCCCCGGGGACCCCTGCCGGCCGCTCCCCC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGCGCGCCCCTGATGGACTTCGGAAATGACTTCGTGCCGCCGGCGCCCCGGGGACCCCTGCCGGCCGCTCCCCC 296
Query 297 CGTCGCCCCGGAGCGGCAGCCGTCTTGGGACCCGAGCCCGGTGTCGTCGACCGTGCCCGCGCCATCCCCGCTGT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CGTCGCCCCGGAGCGGCAGCCGTCTTGGGACCCGAGCCCGGTGTCGTCGACCGTGCCCGCGCCATCCCCGCTGT 370
Query 371 CTGCTGCCGCAGTCTCGCCCTCCAAGCTCCCTGAGGACGACGAGCCTCCGGCCCGGCCTCCCCCTCCTCCCCCG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGCTGCCGCAGTCTCGCCCTCCAAGCTCCCTGAGGACGACGAGCCTCCGGCCCGGCCTCCCCCTCCTCCCCCG 444
Query 445 GCCAGCGTGAGCCCCCAGGCAGAGCCCGTGTGGACCCCGCCAGCCCCGGCTCCCGCCGCGCCCCCCTCCACCCC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCAGCGTGAGCCCCCAGGCAGAGCCCGTGTGGACCCCGCCAGCCCCGGCTCCCGCCGCGCCCCCCTCCACCCC 518
Query 519 GGCCGCGCCCAAGCGCAGGGGCTCCTCGGGCTCAGTG------------------------------------- 555
|||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCCGCGCCCAAGCGCAGGGGCTCCTCGGGCTCAGTGGATGAGACCCTTTTTGCTCTTCCTGCTGCATCTGAGC 592
Query 556 -------------------------------------------------------------------------- 555
Sbjct 593 CTGTGATACGCTCCTCTGCAGAAAATATGGACTTGAAGGAGCAGCCAGGTAACACTATTTCGGCTGGTCAAGAG 666
Query 556 -------------------------------------------------------------------------- 555
Sbjct 667 GATTTCCCATCTGTCCTGCTTGAAACTGCTGCTTCTCTTCCTTCTCTGTCTCCTCTCTCAGCCGCTTCTTTCAA 740
Query 556 -------------------------------------------------------------------------- 555
Sbjct 741 AGAACATGAATACCTTGGTAATTTGTCAACAGTATTACCCACTGAAGGAACACTTCAAGAAAATGTCAGTGAAG 814
Query 556 -------------------------------------------------------------------------- 555
Sbjct 815 CTTCTAAAGAGGTCTCAGAGAAGGCAAAAACTCTACTCATAGATAGAGATTTAACAGAGTTTTCAGAATTAGAA 888
Query 556 -------------------------------------------------------------------------- 555
Sbjct 889 TACTCAGAAATGGGATCATCGTTCAGTGTCTCTCCAAAAGCAGAATCTGCCGTAATAGTAGCAAATCCTAGGGA 962
Query 556 -------------------------------------------------------------------------- 555
Sbjct 963 AGAAATAATCGTGAAAAATAAAGATGAAGAAGAGAAGTTAGTTAGTAATAACATCCTTCATAATCAACAAGAGT 1036
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1037 TACCTACAGCTCTTACTAAATTGGTTAAAGAGGATGAAGTTGTGTCTTCAGAAAAAGCAAAAGACAGTTTTAAT 1110
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1111 GAAAAGAGAGTTGCAGTGGAAGCTCCTATGAGGGAGGAATATGCAGACTTCAAACCATTTGAGCGAGTATGGGA 1184
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1185 AGTGAAAGATAGTAAGGAAGATAGTGATATGTTGGCTGCTGGAGGTAAAATCGAGAGCAACTTGGAAAGTAAAG 1258
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1259 TGGATAAAAAATGTTTTGCAGATAGCCTTGAGCAAACTAATCACGAAAAAGATAGTGAGAGTAGTAATGATGAT 1332
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1333 ACTTCTTTCCCCAGTACGCCAGAAGGTATAAAGGATCGTTCAGGAGCATATATCACATGTGCTCCCTTTAACCC 1406
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1407 AGCAGCAACTGAGAGCATTGCAACAAACATTTTTCCTTTGTTAGGAGATCCTACTTCAGAAAATAAGACCGATG 1480
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1481 AAAAAAAAATAGAAGAAAAGAAGGCCCAAATAGTAACAGAGAAGAATACTAGCACCAAAACATCAAACCCTTTT 1554
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1555 CTTGTAGCAGCACAGGATTCTGAGACAGATTATGTCACAACAGATAATTTAACAAAGGTGACTGAGGAAGTCGT 1628
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1629 GGCAAACATGCCTGAAGGCCTGACTCCAGATTTAGTACAGGAAGCATGTGAAAGTGAATTGAATGAAGTTACTG 1702
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1703 GTACAAAGATTGCTTATGAAACAAAAATGGACTTGGTTCAAACATCAGAAGTTATGCAAGAGTCACTCTATCCT 1776
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1777 GCAGCACAGCTTTGCCCATCATTTGAAGAGTCAGAAGCTACTCCTTCACCAGTTTTGCCTGACATTGTTATGGA 1850
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1851 AGCACCATTGAATTCTGCAGTTCCTAGTGCTGGTGCTTCCGTGATACAGCCCAGCTCATCACCATTAGAAGCTT 1924
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1925 CTTCAGTTAATTATGAAAGCATAAAACATGAGCCTGAAAACCCCCCACCATATGAAGAGGCCATGAGTGTATCA 1998
Query 556 -------------------------------------------------------------------------- 555
Sbjct 1999 CTAAAAAAAGTATCAGGAATAAAGGAAGAAATTAAAGAGCCTGAAAATATTAATGCAGCTCTTCAAGAAACAGA 2072
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2073 AGCTCCTTATATATCTATTGCATGTGATTTAATTAAAGAAACAAAGCTTTCTGCTGAACCAGCTCCGGATTTCT 2146
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2147 CTGATTATTCAGAAATGGCAAAAGTTGAACAGCCAGTGCCTGATCATTCTGAGCTAGTTGAAGATTCCTCACCT 2220
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2221 GATTCTGAACCAGTTGACTTATTTAGTGATGATTCAATACCTGACGTTCCACAAAAACAAGATGAAACTGTGAT 2294
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2295 GCTTGTGAAAGAAAGTCTCACTGAGACTTCATTTGAGTCAATGATAGAATATGAAAATAAGGAAAAACTCAGTG 2368
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2369 CTTTGCCACCTGAGGGAGGAAAGCCATATTTGGAATCTTTTAAGCTCAGTTTAGATAACACAAAAGATACCCTG 2442
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2443 TTACCTGATGAAGTTTCAACATTGAGCAAAAAGGAGAAAATTCCTTTGCAGATGGAGGAGCTCAGTACTGCAGT 2516
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2517 TTATTCAAATGATGACTTATTTATTTCTAAGGAAGCACAGATAAGAGAAACTGAAACGTTTTCAGATTCATCTC 2590
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2591 CAATTGAAATTATAGATGAGTTCCCTACATTGATCAGTTCTAAAACTGATTCATTTTCTAAATTAGCCAGGGAA 2664
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2665 TATACTGACCTAGAAGTATCCCACAAAAGTGAAATTGCTAATGCCCCGGATGGAGCTGGGTCATTGCCTTGCAC 2738
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2739 AGAATTGCCCCATGACCTTTCTTTGAAGAACATACAACCCAAAGTTGAAGAGAAAATCAGTTTCTCAGATGACT 2812
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2813 TTTCTAAAAATGGGTCTGCTACATCAAAGGTGCTCTTATTGCCTCCAGATGTTTCTGCTTTGGCCACTCAAGCA 2886
Query 556 -------------------------------------------------------------------------- 555
Sbjct 2887 GAGATAGAGAGCATAGTTAAACCCAAAGTTCTTGTGAAAGAAGCTGAGAAAAAACTTCCTTCCGATACAGAAAA 2960
Query 556 ----------------------------------------------------GTTGTTGACCTCCTGTACTGGA 577
||||||||||||||||||||||
Sbjct 2961 AGAGGACAGATCACCATCTGCTATATTTTCAGCAGAGCTGAGTAAAACTTCAGTTGTTGACCTCCTGTACTGGA 3034
Query 578 GAGACATTAAGAAGACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTATTCAGCATT 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GAGACATTAAGAAGACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTATTCAGCATT 3108
Query 652 GTGAGCGTAACAGCCTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAAGGGTGTGAT 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GTGAGCGTAACAGCCTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAAGGGTGTGAT 3182
Query 726 CCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTATATCTGAGG 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTATATCTGAGG 3256
Query 800 AGTTGGTTCAGAAGTACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGGCGCCTCTTC 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 AGTTGGTTCAGAAGTACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGGCGCCTCTTC 3330
Query 874 TTAGTTGATGATTTAGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGGTGCCTTGTT 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 TTAGTTGATGATTTAGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGGTGCCTTGTT 3404
Query 948 TAATGGTCTGACACTACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGG 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TAATGGTCTGACACTACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAACGGCATCAGG 3478
Query 1022 CACAGATAGATCATTATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAAGCAAAAATC 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CACAGATAGATCATTATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAAGCAAAAATC 3552
Query 1096 CCTGGATTGAAGCGCAAAGCTGAA 1119
||||||||||||||||||||||||
Sbjct 3553 CCTGGATTGAAGCGCAAAGCTGAA 3576
