Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03802
- Subject:
- NR_146946.1
- Aligned Length:
- 2254
- Identities:
- 893
- Gaps:
- 1361
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCATCCGGGCTCCCGGCAGCGGCGCTGCGGCGGCTCGCGGGAGACGCTGCGCGCGGGGCTAGCGGGCGGCGGA 74
Query 1 ------------------------------------------------------------ATGGCAGGCTCCCT 14
||||||||||||||
Sbjct 75 GCGGACGGCGACGGGGCGCTCTCGGGCTGCCGGCGGGGCCGAGCGCCGCGCGTCCCGAGCATGGCAGGCTCCCT 148
Query 15 GCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCCCCAGTTCA 88
||||||||||||||||||||||||||||||
Sbjct 149 GCCTCCCTGCGTGGTGGACTGTGGCACCGG-------------------------------------------- 178
Query 89 TTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGGGA 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 ------------GTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGGGA 240
Query 163 GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACG 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACG 314
Query 237 ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG 388
Query 311 AACCTGAGGACCATTATTTTTTAAT-------------------------------------GACAGAACCTCC 347
||||||||||||||||||||||||| ||||||||||||
Sbjct 389 AACCTGAGGACCATTATTTTTTAATGGGGTAACTATCTCCTTCCTGCTGTAATCAGTGACCAGACAGAACCTCC 462
Query 348 ACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAAATTATGTTTGAATCATTTAACGTACCAGGACTCTACA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 ACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAAATTATGTTTGAATCATTTAACGTACCAGGACTCTACA 536
Query 422 TTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAACGTACGTTAACGGGG 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 TTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAACGTACGTTAACGGGG 610
Query 496 ATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCAT 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 ATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCAT 684
Query 570 CAAACACATCCCGATTGCAGGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAA 643
||||||||||||||||||
Sbjct 685 CAAACACATCCCGATTGC-------------------------------------------------------- 702
Query 644 TCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTC 717
|||||||||||||||||||||||||||||||||||
Sbjct 703 ---------------------------------------AGGAGAAATACTGTTACATTTGCCCCGATATAGTC 737
Query 718 AAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCA 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 AAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCA 811
Query 792 GAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCA 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 812 GAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCA 885
Query 866 ACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGC 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 ACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGC 959
Query 940 CCGCTGTATAAG-------------------------------------------------------------- 951
||||||||||||
Sbjct 960 CCGCTGTATAAGAATGTCGTACTCTCAGGAGGCTCCACCATGTTCAGGGATTTCGGACGCCGACTGCAGAGGGA 1033
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1034 TTTGAAGAGAGTGGTGGATGCTAGGCTGAGGCTCAGCGAGGAGCTCAGCGGCGGGAGGATCAAGCCGAAGCCTG 1107
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1108 TGGAGGTCCAGGTGGTCACGCATCACATGCAGCGCTACGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCGACT 1181
Query 952 CCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACTATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCC 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 CCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACTATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCC 1255
Query 1026 CGTCTTTGGAGTCATGTCC------------------------------------------------------- 1044
|||||||||||||||||||
Sbjct 1256 CGTCTTTGGAGTCATGTCCTAGTGTCTGCCTGAACGCGTCGTTCGATGGTGTCACGTTGGGGAACAAGTGTCCT 1329
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1330 TCAGAACCCAGAGAAGGCCGCCGTTCTGTAAATAGCGACGTCGGTGTTGCTGCCCAGCAGCGTGCTTGCATTGC 1403
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1404 CGGTGCATGAGGCGCGGCGCGGGCCCTTCAGTAAAAGCCATTTATCCGTGTGCCGACCGCTGTCTGCCAGCCTC 1477
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1478 CTCCTTCTCCCGCCCTCCTCACCCTCGCTCTCCCTCCTCCTCCTCCTCCGAGCTGCTAGCTGACAAATACAATT 1551
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1552 CTGAAGGAATCCAAATGTGACTTTGAAAATTGTTAGAGAAAACAACATTAGAAAATGGCGCAAAATCGTTAGGT 1625
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1626 CCCAGGAGAGAATGTGGGGGCGCAAACCCTTTTCCTCCCAGCCTATTTTTGTAAATAAAATGTTTAAACTTGAA 1699
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1700 ATACAAATCGATGTTTATATTTCCTATCATTTTGTATTTTATGGTATTTGGTACAACTGGCTGATACTAAGCAC 1773
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1774 GAATAGATATTGATGTTATGGAGTGCTGTAATCCAAAGTTTTTAATTGTGAGGCATGTTCTGATATGTTTATAG 1847
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1848 GCAAACAAATAAAACAGCAAACTTTTTTGCCACATGTTTGCTAGAAAATGATTATACTTTATTGGAGTGACATG 1921
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1922 AAGTTTGAACACTAAACAGTAATGTATGAGAATTACTACAGATACATGTATCTTTTAGTTTTTTTTGTTTGAAC 1995
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1996 TTTCTGGAGCTGTTTTATAGAAGATGATGGTTTGTTGTCGGTGAGTGTTGGATGAAATACTTCCTTGCACCATT 2069
Query 1045 ---------------------------------- 1044
Sbjct 2070 GTAATAAAAGCTGTTAGAATATTTGTAAATATCT 2103
