Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03802
- Subject:
- NR_147013.2
- Aligned Length:
- 6135
- Identities:
- 548
- Gaps:
- 5557
Alignment
Query 1 ATGGCAGGCTCCCTGCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGAGCCCCAGTTCATTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GAGTGTTGAGGGGAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAGTGGCCGATACGACAT--GGAATCATTG---AAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTT 291
|||.| |.| |||..||.|| ||| ||||| |.||.| ||.||||
Sbjct 1 ----GGCAG------CCTGCGGAGCCACTGGCCAAG-CTGGG-----------AAGTCC--GGCGCAA------ 44
Query 292 TTTAAATATCTTCG---AGCTGAACCTGAGGACCATTATTTTTTAAT--------GACAGAACCTCCACTCAAT 354
||.|| .||.||.||.|.| || | |||||||||||||||||||
Sbjct 45 ---------CTCCGCACCGCAGAGCCGGCG--CC------------TCCTCGGCAGACAGAACCTCCACTCAAT 95
Query 355 ACACCAGAAAACAGAGAGTATCTTGCAGAAATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGT 428
||||||||||||||||||||||||
Sbjct 96 ACACCAGAAAACAGAGAGTATCTT-------------------------------------------------- 119
Query 429 TCAGGCAGTGCTGGCCTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCA 502
Sbjct 120 -------------------------------------------------------------------------- 119
Query 503 TTGACAGCGGAGATGGAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACAC 576
||||||||||||||||||||||||||||||||||||
Sbjct 120 --------------------------------------GCAGAAGGTTATGTAATTGGAAGCTGCATCAAACAC 155
Query 577 ATCCCGATTGCAGGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCC 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 ATCCCGATTGCAGGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCC 229
Query 651 TGAGCAGTCACTGGAGACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAAT 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 TGAGCAGTCACTGGAGACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAAT 303
Query 725 TTGCCAAGTATGATGTGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAG 798
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 TTGCCAAGTATGATGTGGATCCCCAGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAG 377
Query 799 TTTGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGA 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 378 TTTGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGA 451
Query 873 CTTTATGGAGTCCATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGT 946
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 452 CTCTATGGAGTCCATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGTCCGCTGT 525
Query 947 ATAAG--------------CCCGAGTTCTTTC----AGGTCTGCCACACCAAGAAGGACTATGAAGAGTACGGG 1002
||||| .|.||| ||.|| ||||| |.|||.|
Sbjct 526 ATAAGATGGAACAAATTCCACTGAG--CTATCCTCAAGGTC------------ACGGATT-------------- 571
Query 1003 CCCAGCATCTGCCGCCAC-----------------------AACCC---CGT---CT----TTGGAG------T 1037
|||.|.||||.|.||.| |.||| ||| || ||.||| |
Sbjct 572 -CCATCCTCTGTCACCTCCATTTCATTGAGATGATATATTGAGCCCATGCGTAGCCTTTTATTTGAGGTATTCT 644
Query 1038 CATG---TCC---------------------------------------------------------------- 1044
|||| |.|
Sbjct 645 CATGATTTTCATTTTTAATTCTAGGCTCTACTTTTGCTGAAATTTTCTATTTTTTTCATTTGTTTCAAGAGAAC 718
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 719 CCATAATTGCTTATTGAAGCATTTTTATGACAATTATTCTAAAATTCTTTGCAGGTAATCCCAGCACCTGAGTC 792
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 793 ATCTTTATGTTGGAGTCTCAATCGACTCTTCATTCATTTGTGATTTTTCTGGTTCTTGCTATGATAAGTGGTTT 866
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 867 TTTATTGTATTCTGGACATTTTGATAAGATTGTGAATCCTATTTACTTTTTTTTTTTTTGAGACGGAGTCTAGC 940
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 941 TCTATCTCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAATCGATTC 1014
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1015 TCCTGCCACAGCCTCCTGAGTAGCTGGGATTGCAAACATGCGCCACCACACCCAGCTCATTTTTGTATTTTTAG 1088
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1089 TAGAGATGGGGTTTCACCATGTTGGCCAGGATGTTCTCGATCTCCTGATCTCGTGATCTGCCCACCTCGGCCTC 1162
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1163 CCAAAGTGTTGGGATTACAGGTGCGAGCCACCGCACCCGGCCTACTCTTTTTTTTTTTTAATAGCCAGCTTCTC 1236
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1237 TGTTGAGATGTAGCACCAGGGCTGTGTATCTGTTCAGTCTCCTTTGGGCCCAGGGCCAGTACGGGAGGGAAGGG 1310
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1311 AGAGCAGAACGCGGACCACTCTACCTTGAGTTGCCTCATTCTGTATCATCGATGCCTGGTGGAAGTGGGCTTAC 1384
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1385 TCTGCATCCTGCTGACACCGCAGAGAAACTGGAGCCCATGGCCTGCTTCCCTGGGACAGGAGCTAGGGTGGAAA 1458
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1459 ATCAGCTTCCAGCTTGGCCCTGCTGAAACCCTGGCAGGGGCAGGTTCCATTGTAGTTTGGCTGGAATCGAGCAG 1532
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1533 GTATTGCCAACAGCATCGTCTATTGTTGGAGTACCTTTGCCCCAGATCCTGAGATGGGGTAATTTTTAAAGAAA 1606
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1607 AGAGGTTCAATTGGCTCACAAGCCTGAAGGCTGTACCAGCATGGTGCCCAGCTTCTGGGGAGGGCTCAGGGAGC 1680
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1681 TTTGACTCACAGAGGAAGGTGAAGTGGGAGCAGGCACTTCACATGGCAAAAGCAAGAACAAAAGAGTGGGAGGC 1754
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1755 AGTTGCCACACACTTCTACATGACCAGATCTCTTGTGAACTCAGAGCTCACTCATCACCCAAGAGATGGCCCAC 1828
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1829 GCCATCCATGAGGAATGCACTCCCATGATATAAACACCCCCACCAGGCCCCGCCTCCAAGAGTGGAGATTACAG 1902
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1903 TTCAACACGAGATTTGGTGGGGGCATATCAAAACTACATTAACCTTAAATTATGAAGACGGTAAACTAAATAAT 1976
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1977 CTGCTTTCTTTCCTTTCCTGTTTTGTGTCTGTTTTTCAGATTTCCAAGGCCAGCAATGTTCTCTTCCTCTCCCT 2050
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2051 TTTCTTTGTATAAAAATTCATTCTCAAGAAAAACTCTCATATCAATTGTTTACATGTCACTATGGCTAAGACAC 2124
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2125 TAAAAGCCCTCTCCCTGCAAAACTGGTGGCAAAGCTCTCTAGAGAACCACAAACTGTTGCATCCTTACTACGTG 2198
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2199 GGGCAGCAGCAAGCCCAGGTGAAGATGTGCATGTTCTTGGAGAAAGTATTAATAACATACCGACACTTACATCT 2272
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2273 GGGTGAATAATTTCATCAAATCTCTTAACTCACGCTTGCACAAACTTCACCTGGAGAGAGAGAGGGAAAGCTGT 2346
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2347 GCCAGAAATAAATGGTTATTGAGGTCACTGTTTGTTTGTTTTTCTCAGGAGTGGAAGGAGATTAACCAGGGTGG 2420
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2421 CAATAAACAAAATTACTTGCTGTTTTAAAACTTAATGACAACCCTATAGGTTATTAGCAATGCCAAAGTTGCAG 2494
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2495 GGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCATCTGAGGTCGGGAGTT 2568
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2569 CGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTTTACTAAAAATACAAAAAAAATTAACCGGGTGTGGTGG 2642
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2643 TGCATACCTGTAACCCCAGCTACTCAAGAAGTGGAGGCGGGAGAATTGCTTGAACACAGGAGGCGGAGGTTGCG 2716
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2717 ATGAGCCGAGATCACGCCATTGTACTCCAGCCTGGGCAGCAAGAGTGAAACTCAGTCTCAAAAAATACAAAACA 2790
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2791 AAACAAAACAAAAAGCCAAAGTGGAAAAGCAAAAATTTTGTGGTATTTGCATTCAATTATTATGCTTTAATTCA 2864
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2865 ACCATTCACAATTTCTAGGGAACATTAACTTTATTGCAATCCCAGGTAAATTTAGGATAATTTAACAATAATCG 2938
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2939 TTGGTGTTCTACTCATCTACTTGTCTTTAAAATCCACATATATTTTTTAAAAGATGACATCCTTTAAAAATATT 3012
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3013 ATATTCAGTGAATTTTCAATATTATTTTAAATATTATCATGGACAGTTGTTATTGGAAATGACAGTTCACCATT 3086
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3087 GCAAATCAATGCAGTGGCTACAAGTCCCCCGTGTCACACAAAAATAGACGGGGTAGCTCTGACAGCATGCATCC 3160
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3161 TTATGCCCTGTTCTATTAATGATGCACTGCACCCCATCAGGGTCTGCAGCTGTATCATTACTCACAGAGACGGT 3234
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3235 TCTGCCTTTGGCTTTCCCTGGTCCTCCATGGCTAGGAACATCATTTAACAGGGTTTTGTAGAATTCACTGGGTG 3308
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3309 GTTAGTCTTAGAAAACCCAAGGCAGAAACACACAGCCAACTATCCCCCAAGTGCTTGTGCTTGAACTTTCAGAA 3382
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3383 CATAAGAAAATTGTGTTAAGCTGGATCTGCAAGTACAAATGGAGAGTGAAATGGGTTCTATAGAATCCAAATGA 3456
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3457 CACAATCTTTCCTCCTGCTAAGAATTACTGGCTATTGAACCAATTCCTGCCTATTAACTGTGAGGTGAAGTCCA 3530
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3531 AGATCCACAGTCAAGCATTCAAAGATCCAACCTGATTTTTCTCTGCATAACTGTTTTACTAGGAGTAAGACTGA 3604
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3605 CTTGCCTGGTTTACCAAGACAGGCTGTGAGAATTCTTCCCACTTACCTTTACTGAGTCAATGTGGACAGTTTGA 3678
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3679 AATAACTTGAACCATTCTTCTTACATTTTTAAATCCTACACAAGCCTCAAAACAAAATCCAAGTCACTTTTCCT 3752
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3753 CTGTGGGATCTTCACTGAGCCCCCCAGCAGGCATTCCTCTTGCTATCTCCTGTGCGAATAGCTCTGAAGGTCTG 3826
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3827 TATTGCAAATATGACAGTCAACACACCGGCTAAGGTAGAACAAAAAGTGGCATTATTAAGCTGAAAAAAGCCCG 3900
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3901 GACCAAAATGAAAGATTCTTATTGTGGGAGCAATTGCTCACACTCACCAATAGCTGCTTGTTTCCTTCTTGGGC 3974
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 3975 ACACAGAAATTACAATTCCCAACTTTCCTGCAGTTGGATAGAGCCATGTGAGTAATTCCAGCCTGGGGACTCTG 4048
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4049 ACTAGAGATGAAAATCCCCTCCATGGTGGAGCAAAATCCCCTGAGTGGCCCTCCGGCCTTCTGTTCTCCAGCTG 4122
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4123 TGCTAACCTGGAAGCCACACATTGAGATGACAGAGCAGCAAAGTGGAGACAGGCCATGTCTCTGAGTCACCATG 4196
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4197 TGACCCACAGGAGATTTTGAGTAAATTAAAATACAAATCTTTGTCATAATAAACCACAGATATTTCAGCAATGA 4270
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4271 TTTGCAACCATAGCGTAAGATAACCTATCATGGCTAATGCTCCTAGGTTCTCAACCTGTATCCACCAGTAACTA 4344
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4345 GGTAGCTTGGGCAAATTATCTTCTATGCAACCTCTGGTTGATAATGAATTCCTTTTATAAGTAAGAGAATGAGC 4418
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4419 TGGAACCCAAATGTGTACAGAGGAAATCTGAATGAAGTGGGAAGGGTAAGATGCAGAGTGAGTGGAGACTTCAC 4492
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4493 TCATTGTTGAAAGAGGGCAGTTGCTACTCGGTTATTACTGATGCTTACATGAAGAAATCCAGTTTTAATATAAC 4566
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4567 CACATCTTGCCATTTCTCAAGGGAAGTCATGTACTATCTGTGTGTCTGTCCTTCATATAGCTCCATCAATATTC 4640
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4641 TCCTCTTAAATCTTGGAGACTGTGCTGGATGTTTTCCAAATGTCTCTCCTGATCCAGCCTGCAGTCTTCTCTAC 4714
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4715 CCTGGTTTGGGTATCTGGAGCCAGACCTGTATGTACTGCATCAGCAGGTTCTCTTCCCTTCGCTTTCTGCATGG 4788
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4789 TTTCCACCACCATGAGGTCCTGGTGGGAGATCAGAGGCTGGGAAGAGCAGAGGCTGGGAAGAGCAGAGGCAGGA 4862
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4863 GAGGCACTGCATAACTCCTCTCAGGCCGTCCTCTCTCTCTGGCTCTCTGTAGGTTTGGGCAACTGCTCCTTCCA 4936
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 4937 TCCATATATTCAGGCTGAGGTGTGGAAAAGGCTCCCAAATGGCATTAGCTCCAGAGTGATGCACCTTCCATATC 5010
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5011 CTTTTATTTTCATTATTTCTCCTCCTTTGAAGAAGTTGAGTATTTTTGCAAGAACATTGACTAACAGGAACTAA 5084
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5085 TCAATTATTCTTAAATTTAAAAAATTGAATGAATCAAATGTTCAACAAAGGATACACACACAGACTGAATGACA 5158
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5159 ACTAAGTTATTTTACAGTTCCACAAACCTAGAGAGATCTATCAATGAATGGGGTATTACATTCTAATATTTCTA 5232
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5233 AGACTATATTGAATATTGAATATTCAATATTCTAAGACTATATTGAATATTCAATATTCTAAGACTATATTGAA 5306
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5307 TATTCAATATTCTAAGACTATATTGAATATTCAATATTCTAAGACTATATTGAATATTCAATATTCTAAGACTA 5380
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5381 TATTGAATATTCAATATTCTAAGACTATATTGAATATTCAATATTCTAAGACTATATTGAATATTCAATATTCT 5454
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5455 AAGACTATATTGAATATTCAATATTCTAAGACTATATTGAATATTCAATATTCTAAGACTATACTGAATACTGA 5528
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 5529 ATGACTACATCACCTACAAGAATACAATGAGAGTACTAAACTAACACTCAGTACTAAACATTTGTCCTACACTC 5602
Query 1045 ------------------------------------------------------------------- 1044
Sbjct 5603 AGAGGTAGGCACCAGGTTCTGGTGTCAATGTATGATATGCCTGTCTCTAAATAAACATTTTATCAGA 5669
