Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03882
Subject:
XR_002958798.1
Aligned Length:
2209
Identities:
690
Gaps:
1519

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCTCCCTGACCGAGCCCACGTCTCCCCACGGCCAGAGAAATCTCCGGCCCGGCCCGCATCGCCAGCCCCCAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCGGAGGAACGGCCCGAGCCCAGGAGAACCACATCTTCGTCCCAGCCCCGGAGGCTCCTGTGGGCAAGATCGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGCCAACGGGTTCCTGAGGCCCCTCCTGGCCAGGCAGGGTTTCCCCGCGCGTTTCCGAGGAGCCCTGCCTGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGGCGGCTGGACAAACAGGTCGTAGCACCGATCGCGCCCGCCCCCAGCAGGGGTCCCGCACAGGCTTGCCCCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GACCCCCACCCAAACCTGTCCTTCCGCTTTGCCCCCAAACAGTGCACTTGCCGGCGGTCCCAACCCAGCAGGAG  370

Query    1  --------ATGAGGTTGGCAGGCCCTCTCCGCATTGTGGTCCTAGTCGTCAGTGTGGGTGTCACATGGATCGTG  66
                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGTGGACATGAGGTTGGCAGGCCCTCTCCGCATTGTGGTCCTAGTCGTCAGTGTGGGTGTCACATGGATCGTG  444

Query   67  GTCAGCATCCTCCTGGGTGGGCCTGGCAGTGGCTTTCCTCGCATCCAGCAACTCTTCACCA-------------  127
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  445  GTCAGCATCCTCCTGGGTGGGCCTGGCAGTGGCTTTCCTCGCATCCAGCAACTCTTCACCAGCTGGAGTGCAGT  518

Query  128  --------------------------------------------------------------------------  127
                                                                                      
Sbjct  519  GGTGCAATCTCGGTTCACTGCAACCTCTACCTCCTGGGTTCAAGCGATTCTAGTGCCCCAGCCTCCCGAGTAGC  592

Query  128  -----------GTCCAGAGAGCTCGGTGACTGCAGCGCCACGGGCCAGGAAGTACAAGTGTGGCCTGCCCCAGC  190
                       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGAGACTACAGGTCCAGAGAGCTCGGTGACTGCAGCGCCACGGGCCAGGAAGTACAAGTGTGGCCTGCCCCAGC  666

Query  191  CGTGTCCTGAGGAGCACCTGGCCTTCCGCGTGGTCAGCGGGGCCGCCAACGTCATTGGGCCCAAGATCTGCCTC  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGTGTCCTGAGGAGCACCTGGCCTTCCGCGTGGTCAGCGGGGCCGCCAACGTCATTGGGCCCAAGATCTGCCTC  740

Query  265  GAGGACAAGATGCTGATGAGCAGCGTCAAGGACAACGTGGGCCGCGGGCTGAACATCGCCCTGGTGAACGGGGT  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAGGACAAGATGCTGATGAGCAGCGTCAAGGACAACGTGGGCCGCGGGCTGAACATCGCCCTGGTGAACGGGGT  814

Query  339  CAGCGGCGAGCTCATCGAGGCCCGGGCCTTTGACATGTGGGCCGG-----------------------------  383
            |||||||||||||||||||||||||||||||||||||||||||||                             
Sbjct  815  CAGCGGCGAGCTCATCGAGGCCCGGGCCTTTGACATGTGGGCCGGAGGTGAGTTGCAGCGCAGCGTCTTGCATT  888

Query  384  --------------------------------------------------------------------------  383
                                                                                      
Sbjct  889  TTGACTGCAGCAAAATGACCTGGGCAGCTTCCCCTGAGACACTGCTCTCTCTGTCTGTACTTGGAGCTTCTCAG  962

Query  384  --------------------------------------------------------------------------  383
                                                                                      
Sbjct  963  TCACCTCCGTGGGTTCAGAAAGGACAGGGGCATCGCCAGCTTGGTCTGGAGGCTGTGGGAGGTCACGGGGATGC  1036

Query  384  --------------------------------------------------------------------------  383
                                                                                      
Sbjct 1037  CTCAGCTTCCTACACCAGCCTGTCCCTTGGCGGGGCATGTCCCAGGCCCAATCCCTACTTCTGTTTCCTTGTTT  1110

Query  384  ---------------------------------------------------------------------AGATG  388
                                                                                 |||||
Sbjct 1111  GGAGAACGGGCTTGTGGGAGGGTGCTCAGTGGTGCCTGATGACCCCTGTTCCGTGGCACCTGCCCCCCCAGATG  1184

Query  389  TCAACGACCTGTTGAAGTTTATTCGGCCACTGCACGAAGGCACCCTGGTGTTCGTGGCATCCTACGACGACCCA  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCAACGACCTGTTGAAGTTTATTCGGCCACTGCACGAAGGCACCCTGGTGTTCGTGGCATCCTACGACGACCCA  1258

Query  463  GCCACCAA------------------------------------------------------------------  470
            ||||||||                                                                  
Sbjct 1259  GCCACCAAGTAGGTGCTTGGGGAGGCCAGCCTCAGCCTTGCCCTTCTGCAGCAACAGCTGACACCCCTTCCTCC  1332

Query  471  ----------GATGAATGAAGAGACCAGAAAGCTCTTCAGTGAGCTGGGCAGCAGGAACGCCAAGGAGCTGGCC  534
                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CATGCTGCAGGATGAATGAAGAGACCAGAAAGCTCTTCAGTGAGCTGGGCAGCAGGAACGCCAAGGAGCTGGCC  1406

Query  535  TTCCGGGACAGCTGGGTGTTTGTCGGGGCCAAGGGTGTGCAGAACAAGAGCCCCTTTGAGCAGCACGTGAAGAA  608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTCCGGGACAGCTGGGTGTTTGTCGGGGCCAAGGGTGTGCAGAACAAGAGCCCCTTTGAGCAGCACGTGAAGAA  1480

Query  609  CAGTAAGCACAGCAACAAGTACGAAGGCTGGCCCGAGGCGCTGGAGATGGAAGGCTGTATCCCGCGGAGAAGCA  682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CAGTAAGCACAGCAACAAGTACGAAGGCTGGCCCGAGGCGCTGGAGATGGAAGGCTGTATCCCGCGGAGAAGCA  1554

Query  683  CGGCCAGC------------------------------------------------------------------  690
            ||||||||                                                                  
Sbjct 1555  CGGCCAGCTAGCACGGCCAGTGCCAGGACCGGGCCGAGGGAGGCCAGACCAAGGGAGGCACGCGCGCTGCCGGG  1628

Query  691  --------------------------------------------------------------------------  690
                                                                                      
Sbjct 1629  CGGACAGAGGCTGAGGCTCACACCCCACACCCGGGCAGGAGCGCTCCCTGGCCCCAACACATCGGGGCTCCGAG  1702

Query  691  --------------------------------------------------------------------------  690
                                                                                      
Sbjct 1703  GCAGTGACCAGAACGTGGTCTCAAGGTGGTGGGGGCTATGGGGGCTGCAGGGGGTAGCCCTGCCGCACTTTGTC  1776

Query  691  --------------------------------------------------------------------------  690
                                                                                      
Sbjct 1777  ACGGGAGCCCAGGGTACCCGCCTCCTTTTCGTAACACTGTTCCCCCCGGTCAGCCCATCTAGCCCTGTCCTCCA  1850

Query  691  --------------------------------------------------------------------------  690
                                                                                      
Sbjct 1851  TTCCTCACGCCATCTCCATCCCCATCTTGAGTCCTGGAACGGCCCTGGGTGCCTGCCCCTCACTGTGCATCTCT  1924

Query  691  --------------------------------------------------------------------------  690
                                                                                      
Sbjct 1925  GGGAGCAGCCCGGCAGGTTGGGGCGTCTTCCAGAACCTCTCCCTTCTGGAGCCACTCTGCACTGCGGGCTAAAC  1998

Query  691  --------------------------------------------------------------------------  690
                                                                                      
Sbjct 1999  ATGTTTCCAGTGTGATTCCTTCCAGTGAGCCAAACCCGGTGGCTGCTTCATGAGCCTGACTGCCTCTCGCCTGC  2072

Query  691  --------------------------------------------------------------------------  690
                                                                                      
Sbjct 2073  TCTCAGCAGGAAGGGACCCCTGGAGCAGGCTGGCCCGGGGTGGTGAAGTAGCTGGAGCCCGATCACAGTCCCGC  2146

Query  691  ---------------------------------------------------------------  690
                                                                           
Sbjct 2147  GGTTTGTCAGGGGGCCCACCTTCTAGATGACCCCTTAATAAAGTGATGGCCCCACAGAAGAAA  2209

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