Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03947
Subject:
XM_011534013.1
Aligned Length:
1950
Identities:
1587
Gaps:
363

Alignment

Query    1  ATGGCCGGCGCTCGGGCCGCCGCCGCCGCTGCCTCGGCGGGGTCCTCGGCCTCTTCAGGCAACCAGCCGCCTCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGAGCTGGGGCTTGGGGAGCTGCTGGAGGAGTTCTCCCGGACTCAGTACCGGGCCAAGGATGGCAGCGGGACCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCGGCTCTAAGGTTGAGCGCATTGAGAAGAGATGTCTGGAGCTGTTTGGCCGAGACTACTGTTTCAGCGTGATT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCAAACACGAATGGGGATATCTGTGGCCACTATCCCCGGCACATCGTGTTCCTGGAGTATGAGAGTTCTGAGAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGAGAAAGACACGTTTGAGAGTACCGTACAGGTGAGCAAGTTGCAAGACCTCATCCACCGCAGCAAGATGGCCC  370
                                                                               |||||||
Sbjct    1  -------------------------------------------------------------------ATGGCCC  7

Query  371  GGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTTCAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    8  GGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTTCAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCT  81

Query  445  GGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACTATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   82  GGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACTATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGA  155

Query  519  TGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGAAGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  156  TGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGAAGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCT  229

Query  593  ATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATACATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  230  ATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATACATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAG  303

Query  667  TTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACAAAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  304  TTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACAAAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCAT  377

Query  741  CCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAAGATCGGGATTACATGGCAGAAGGGCTCATATTTAACT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  378  CCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAAGATCGGGATTACATGGCAGAAGGGCTCATATTTAACT  451

Query  815  GGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCCCGACTTCCTGACTCACTCTCTGAACATTGACTGGAGC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  452  GGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCCCGACTTCCTGACTCACTCTCTGAACATTGACTGGAGC  525

Query  889  CAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAAACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  526  CAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAAACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGA  599

Query  963  TGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  600  TGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGCTGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCC  673

Query 1037  TTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCTGAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTAT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  674  TTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCTGAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTAT  747

Query 1111  GACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  748  GACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGCTCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAA  821

Query 1185  TTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCTCTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  822  TTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCTCTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGG  895

Query 1259  ATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAGACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  896  ATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAGACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGC  969

Query 1333  GACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  970  GACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCACTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCC  1043

Query 1407  AGCAGGAGCGCCAACTCAGGCAGCTTGGAGGAAGAGCCACTCATCCTCTCCACAGAGTGTCCTCTGGAACCGGC  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1044  AGCAGGAGCGCCAACTCAGGCAGCTTGGAGGAAGAGCCACTCATCCTCTCCACAGAGTGTCCTCTGGAACCGGC  1117

Query 1481  CACAACCCTCAGAGGACCGCTTGCCTTCCCAGCAGGGGCTGGCGGAAGCCAGGTCTTCCAGCTCCTCTTCCTCA  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118  CACAACCCTCAGAGGACCGCTTGCCTTCCCAGCAGGGGCTGGCGGAAGCCAGGTCTTCCAGCTCCTCTTCCTCA  1191

Query 1555  AACCATTCTGATAACTTTTTCAGGATGGGTAGCAGTCCCCTGGAGGTCCCCAAACCCAGATCAGTGGACCATCC  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192  AACCATTCTGATAACTTTTTCAGGATGGGTAGCAGTCCCCTGGAGGTCCCCAAACCCAGATCAGTGGACCATCC  1265

Query 1629  CCTGCCCGGATCCTCTCTCTCCACAGACTATGGCAGCTGGCAGATGGTAACGGGCTGTGGCAGTATTCAGGAGC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266  CCTGCCCGGATCCTCTCTCTCCACAGACTATGGCAGCTGGCAGATGGTAACGGGCTGTGGCAGTATTCAGGAGC  1339

Query 1703  GGGCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTCCCGGATGAGCTCCCTAACAGTTGTCTGCTTGCA  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340  GGGCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTCCCGGATGAGCTCCCTAACAGTTGTCTGCTTGCA  1413

Query 1777  GCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACAGTGGG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414  GCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACAGTGGG  1487

Query 1851  GCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGTTGGAC  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1488  GCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGTTGGAC  1561

Query 1925  TCCGGAGCATCAGCAGCAATGCCTTG  1950
            ||||||||||||||||||||||||||
Sbjct 1562  TCCGGAGCATCAGCAGCAATGCCTTG  1587

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