Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04000
• Subject: XM_017009783.1
• Aligned Length: 1324
• Identities: 964
• Gaps: 350

Alignment

Query    1  ATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCAGCCCACTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGAT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAAC  370
                  ||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ------AT----------GTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAAC  58

Query  371  CACTGAAGCAAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   59  CACTGAAGCAAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAAC  132

Query  445  TGGATTTGTTTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  TGGATTTGTTTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAAT  206

Query  519  AAAGAAAACCAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  207  AAAGAAAACCAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTG  280

Query  593  TCTCCTTACTCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  281  TCTCCTTACTCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTT  354

Query  667  GGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  355  GGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTT  428

Query  741  CAATGATGAATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  429  CAATGATGAATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTG  502

Query  815  GTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  503  GTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCC  576

Query  889  AAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  577  AAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCC  650

Query  963  TGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  651  TGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATA  724

Query 1037  TTCTTATATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  725  TTCTTATATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACT  798

Query 1111  CTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  799  CTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCT  872

Query 1185  GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGA  1258
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  873  GAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGG  946

Query 1259  T-ACAAAATAACTTACAGAAGTTGCTTGAGAATGGTGAC---------------------------  1296
            | ||..|     ||.|     ||.|.||.|.||||.|.|                           
Sbjct  947  TGACCTA-----TTTC-----TTTCCTGTGTATGGGGGCAGTCACAGTAGTGCCTGTTGGTTGCCC  1002