Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04001
Subject:
NM_001305019.1
Aligned Length:
1133
Identities:
430
Gaps:
703

Alignment

Query    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74

Query   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148

Query  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222

Query  223  GCGCTCGGTGAGAGCCCCACCTGCTTGCCTGGGCCCTGCGCCTCCACAGGCCCTGCCGCGCCTCTGGGAGCTGC  296
            ||||||                                                                    
Sbjct  223  GCGCTC--------------------------------------------------------------------  228

Query  297  GTGTGGAGTTGGGGGCCCCGGGGCCGGGCAGGCGGCCTCCTCGCAGCGTGGGGTTTGCGTTCTTCTCCCCCAGG  370
                                                                                    ||
Sbjct  229  ------------------------------------------------------------------------GG  230

Query  371  AGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGCTGCCCAGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  231  AGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGCTGCCCAGG  304

Query  445  ATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACCCAGCAGATTCCAGAAACAAGGAAGAGGAAAGACAAAGG  518
            ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct  305  ATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACC---CAGATTCCAGAAACAAGGAAGAGGAAAGACAAAGG  375

Query  519  GAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGC-------------------  573
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct  376  GAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGGCTCCCCAAGCCCC  449

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  450  CTTTGCCGGGTTGGAGCAGCTGTCCAAGGCCCGGCGCCGGAGTCGCCCCCGCTTTTTTGCCCACCCCCCTGTCC  523

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  524  CCCGAGCTGACCAGCGTCACGGCTGCTACGTGTGCGGGAAGAGCTTCGCCTGGCGCTCCACACTGGTGGAGCAC  597

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  598  ATTTACAGCCACAGGGGCGAGAAGCCCTTCCACTGCGCAGACTGCGGCAAGGGCTTCGGCCACGCTTCCTCCCT  671

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  672  GAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCCCGAGTGTGGTCGGGCCTTCATGCGCC  745

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  746  GCACGGCGCTGACTTCTCACCTGCGCGTTCACACTGGCGAGAAGCCCTACCGCTGCCCGCAGTGTGGCCGCTGC  819

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  820  TTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCGTAGGGGCCGGCG  893

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  894  CCCTGGGGGGCTGTCTGTGACCCTGACTCCTGTCCGCGGGGACCTGGACCCGCCTGTGGGCTTCCAGCTGTATC  967

Query  574  -----------------------  573
                                   
Sbjct  968  CAGAGATATTCCAGGAATGTGGG  990