Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04033
Subject:
NR_036569.1
Aligned Length:
3799
Identities:
842
Gaps:
2915

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCAGAGCACACCGGACTGCGTTTTTTCCGAACGCCAGCAGCAGGGTCAGAAGGGAGGTAGTCGCCCTCCGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGGCCTGGCGTGGATTCCGAGCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGTACCAGGTAAAGCCCTATCACGGGGTCGGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AACATGCACGGCAGGAGCGGCGGCCCAGCACTCGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAACAAAACGACCACTGAAAACAATGCCGGTGGCAAAACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCAAAGAAAGGGTCCCAAGTGGTACATCGTCATAGCTGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCTGCGAAAGCTGCCAAAAGTGACATGCAGTGTGGCCATGAGGTCTGCCGGAAGTGACTTGTTGGTGTTATC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCCTGAGTTAAAATGTGAAGGGATTTTTTTTTTTCAGATTACTGAGAGTCTTCAGTTACTAGAGGCGGATTTCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGACTGAAGACCATGTTGCAGGCCCACAGCTGCCTACAGAACCGTCCCAAAATATGGCAAAGAAACCTATTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAGCGATAGGGTCTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGGACTCATCCTAAAGTGCTGGCCTCTCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTCCCTGTCTGTGCACACCTCACGGCAAGGGCCAGCCTGTTTCCTCCCGGTCACCTCCAAATCTTGCTGCTTTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AATTCAACTCAGAGGCCTAGCCAGGGTTGAGTTCTCACCCACCTGTGCCGCCCTGCCTTGTTACCTGGAAGCAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGCCTTGGGGACTGAGCAGGCCCTCACTGTCACTTTAAGAAGGGAATCAGCCACTTTGTGCTCACCACCTCTGG  962

Query    1  ----------------------------------------------------------------ATGAGAACAG  10
                                                                            ||||||||||
Sbjct  963  GGAAGGTGTGAGAGGAGAGAAGGAAGTGGCTGTTTGGCTGCTGACAACATGAAGACTTCCTGCGATGAGAACAG  1036

Query   11  AGGCACAGGTGCCGGCCCTGCAGCCCCCAGAACCTGGACTGGAGGGGGCCATGGGGCACCGGACCCTGGTCCTG  84
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||||||||||.||||
Sbjct 1037  AGGCACAGGTGCCGGCCCTGCAGCCCCCAGAACCCGGACTGGAGGGGGCCATGGGGCGCCGGACCCTGGCCCTG  1110

Query   85  CCCTGGGTGCTGCTGACCTTGTGTGTCACTGCGGGGACCCCGGAGGTGTGGGTTCAAGTTCGGATGGAGGCCAC  158
            ||||||||||||||||||.||.||||||||||.|||||||||||||||||.||.||||||||||||||||||||
Sbjct 1111  CCCTGGGTGCTGCTGACCCTGCGTGTCACTGCAGGGACCCCGGAGGTGTGAGTACAAGTTCGGATGGAGGCCAC  1184

Query  159  CGAGCTCTCGTCCTTCACCATCCGTTGTGGGTTCCTGGGGTCTGGCTCCATCTCCCTGGTGACTGTGAGCTGGG  232
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||          
Sbjct 1185  CGAGCTCTCGTCCTTCACCATCCGTTGTGGGTTCCTGGAGTCTGGCTCCATCTCCCTGGTGACT----------  1248

Query  233  GGGGCCCCAACGGTGCTGGGGGGACCACGCTGGCTGTGTTGCACCCAGAACGTGGCATCCGGCAATGGGCCCCT  306
                                                                                      
Sbjct 1249  --------------------------------------------------------------------------  1248

Query  307  GCTCGCCAGGCCCGCTGGGAAACCCAGAGCAGCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTG  380
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249  ---------GCCCGCTGGGAAACCCAGAGCAGCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTG  1313

Query  381  CGCCAACACCACCTTCTGCTGCAAGTTTGCGTCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGC  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314  CGCCAACACCACCTTCTGCTGCAAGTTTGCGTCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGC  1387

Query  455  CCAGCTCAGACCCAGGGCTCTCTGCCCCGCCGACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTG  528
            ||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1388  CCAGCTCAGACCCAGGGCTCTCTGTCCCGCCGACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTG  1461

Query  529  GGGGTCTCAGGAGTCCTCCTCTTTGGCTGTGTCTACCTCCTTCATCTGCTGCGCCGACATAAGCACCGCCCTGC  602
            |||||||||||||||||.|||||||.|||||.|||||||||||||||||||.|||||||.||||||||||||||
Sbjct 1462  GGGGTCTCAGGAGTCCTTCTCTTTGACTGTGGCTACCTCCTTCATCTGCTGTGCCGACAGAAGCACCGCCCTGC  1535

Query  603  CCCTAGGCTCCAGCCGTCCCGCACCAGCCCCCAGGCACCGAGAGCACGAGCATGGGCACCAAGCCAGGCCTCCC  676
            |||||||||||||||.||||.|||||||.||.||||||.|||||||||||||||||||||.|||||||||||||
Sbjct 1536  CCCTAGGCTCCAGCCATCCCACACCAGCTCCTAGGCACTGAGAGCACGAGCATGGGCACCCAGCCAGGCCTCCC  1609

Query  677  AGGCTGCTCTTCACGTCCCTTATGCCACTATCAACACCAGCTGCCGCCCAGCTACTTTGGACACAGCTCACCCC  750
            ||||||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1610  AGGCTGCTCTCCACGTCCCTTATGCCACTATCAACACCAGCTGCTGCCCAGCTACTTTGGACACAGCTCACCCC  1683

Query  751  C-ATGGGGGGCCGTCCTGGTGGGCGTCACTCCCCACCCACGCTGCACACCGGCCCCAGGGCCCTGCCGCCTGGG  823
            | |..|||||||||||||||||||.|||||||||||||||.|.||||||.||||||||||||||||.|||||||
Sbjct 1684  CGACAGGGGGCCGTCCTGGTGGGCATCACTCCCCACCCACACCGCACACTGGCCCCAGGGCCCTGCTGCCTGGG  1757

Query  824  CCTCCACACCCATCCCTGCACGTGGCAGCTTTGTCTCTGTTGAGAATGGACTCTACGCTCAGGCAGGGGAGAGG  897
            ||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.||||.|||.|||||
Sbjct 1758  CCTCCACATCCATCCCTGCACATGGCAGCTTTGTCTCTGTTGAGAATGGACTCTACGCTTAGGCTGGGCAGAGG  1831

Query  898  CCTCCTCACACTGGTCCCGGCCTCACTCTTTTCCCTGACCCTCGGGGGCCCAGGGCCATGGAAGGACCCTTAGG  971
            |||||...|||||||||.|||||||||||||||||||||||| .||||||||||||||||||.|||||||||||
Sbjct 1832  CCTCCCTGCACTGGTCCTGGCCTCACTCTTTTCCCTGACCCT-TGGGGCCCAGGGCCATGGAGGGACCCTTAGG  1904

Query  972  AGTTCGA-------------------------------------------------------------------  978
            |||||.|                                                                   
Sbjct 1905  AGTTCAATGAGAGAGACCATGAGGCCACTGGGCTTTCCCCTTCCCAGGCCTCCTGGGTGCCACCCCCTTACGTT  1978

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 1979  ATTCTTGGGCCTCTAATAAGTGTCCCACAGGTGCCTGGCCAGGCCCACCTGCTGCAGATGTGGTCTGTGTGTGT  2052

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2053  GCATGTGTGGGTGTGTGTGGGCACAGGTGTGAGTGTGTGAGCAACAGTACCCCATTCCAGTCGTTTCCTGCTGT  2126

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2127  GACTAAGTCAGCAACACAGTTCCTCTGACATGGGCCTTGGCTGTGCTTCTTTGGGGGTGAAGAGATTGGGGAGG  2200

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2201  AAGTCTCCACCCCTGGGAGGCAGAAGCCAGGCATAGCGCGCTGGCTAGGACTCCAGTACCGTGAAGGGAGGCAG  2274

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2275  TGAGAGCAGACATCTGTGCCTCATTCCTGATCTCAAGGGGAAAGCAAGAACAAGGGAGGCTTCCTCAGGATCTC  2348

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2349  GAACCTGCGGAAGGAGGACCAGTCTGTGTACTTCTGCCAAGTCCAGCTGGACATACAGATCAGGGAGGCTGTCG  2422

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2423  TGGCAGTCCATCAAGGGGACCCACCTCACCATCACCCAGGCCCTCAGGCAGCCCCTCCACAGGGCCCCTCTCCT  2496

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2497  GCCTGGACAGCTCTGCTGGTCTCCCCGTCCCCTGGAGAAGAACAAGGCCATGGGTCGGCCCCTGCTGCTGCCCC  2570

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2571  TGCTGCTCCTGCTGCAGCCGCCAGCATTTCTGCAGCCTGGTGGCTCCACAGGATCTGGTCCAAGCTACCTTTAT  2644

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2645  GGGGTCACTCAACCAAAACACCTCTCAGCCTCCATGGGTGGCTCTGTGGAAATCCCCTTCTCCTTCTATTACCC  2718

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2719  CTGGGAGTTAGCCATAGTTCCCAACGTGAGAATATCCTGGAGACGGGGCCACTTCCACGGGCAGTCCTTCTACA  2792

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2793  GCACAAGGCCGCCTTCCATTCACAAGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGC  2866

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2867  GGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCG  2940

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 2941  GAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCACAACCACCA  3014

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3015  CCACCTGGAGGCCCAGCAGCACAACCACCATAGCCGGCCTCAGGGTCACAGAAAGCAAAGGGCACTCAGAATCA  3088

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3089  TGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACT  3162

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3163  GCTGTGCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGCAGGGCGCCAAGCAGTGACTTCTGACCAACAG  3236

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3237  AGTGTGGGGAGAAGGGATGTGTATTAGCCCCGGAGGACGTGATGTGAGACCCGCTTGTGAGTCCTCCACACTCG  3310

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3311  TTCCCCATTGGCAAGATACATGGAGAGCACCCTGAGGACCTTTAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCT  3384

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3385  GGGTCCCTGAATCACCGACTGGAGGAGAGTTACCTACAAGAGCCTTCATCCAGGAGCATCCACACTGCAATGAT  3458

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3459  ATAGGAATGAGGTCTGAACTCCACTGAATTAAACCACTGGCATTTGGGGGCTGTTTATTATAGCAGTGCAAAGA  3532

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3533  GTTCCTTTATCCTCCCCAAGGATGGAAAAATACAATTTATTTTGCTTACCATACACCCCTTTTCTCCTCGTCCA  3606

Query  979  --------------------------------------------------------------------------  978
                                                                                      
Sbjct 3607  CATTTTCCAATCTGTATGGTGGCTGTCTTCTATGGCAGAAGGTTTTGGGGAATAAATAGCGTGAAATGCTGCTG  3680

Query  979  -------------------------  978
                                     
Sbjct 3681  ACAAAAAAAAAAAAAAAAAAAAAAA  3705

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