Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04171
- Subject:
- XM_017317026.1
- Aligned Length:
- 3074
- Identities:
- 1697
- Gaps:
- 1144
Alignment
Query 1 ATGAGGGTCTTCCTGCTTTGTGCCTACATACTGCTGCTGATGGTTTCCCAGTTGAGGGCAGTCAGCTTTCCTGA 74
|||.||.||.|.||||||||...||.|.|.|||.|.||..||||.|||..|||..||||.||||||||.||.||
Sbjct 1 ATGGGGTTCCTTCTGCTTTGGTTCTGCGTGCTGTTCCTTCTGGTCTCCAGGTTACGGGCGGTCAGCTTCCCAGA 74
Query 75 AGATGATGAACCCCTTAATACTGTCGACTATCACTATTCAAGGCAATATCCGGTTTTTAGAGGACGCCCTTCAG 148
|||.|||||.|||||.||.||.||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGACGATGAGCCCCTCAACACGGTTGACTATCACTATTCAAGGCAATATCCGGTTTTTAGAGGACGCCCTTCAG 148
Query 149 GCAATGAATCGCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAATTCGAGACACACTTTATATTGCTGGCAGG 222
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAACGAATCGCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAATTCGAGACACACTTTATATTGCTGGCAGG 222
Query 223 GATCAAGTTTATACAGTAAACTTAAATGAAATGCCCAAAACAGAAGTAATACCCAACAAGAAACTGACATGGCG 296
||||||||.||||||||.||||||||||||||.|||.|||||||.||.|||||.|.||||||.|||||.|||.|
Sbjct 223 GATCAAGTCTATACAGTGAACTTAAATGAAATCCCCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGTGGAG 296
Query 297 ATCAAGACAACAGGATCGAGAAAACTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCACAACTTTATCAAAG 370
.||.|||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 297 GTCCAGACAGCAGGATCGAGAAAATTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCACAACTTCATCAAAG 370
Query 371 TATTTGTTCCAAGAAACGATGAGATGGTTTTTGTTTGTGGTACCAATGCATTCAATCCCATGTGTAGATACTAC 444
|.|||||.||||||||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.||||||||.
Sbjct 371 TCTTTGTCCCAAGAAATGATGAGATGGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGATGTGCAGATACTAT 444
Query 445 AGGTTGAGTACCTTAGAATATGATGGGGAAGAAATTAGTGGCCTGGCAAGATGCCCATTTGATGCCAGACAAAC 518
||||||||.||.|||||.||||||||||||||||||||||||||||||.|||||||.|||||||||.|||||||
Sbjct 445 AGGTTGAGAACGTTAGAGTATGATGGGGAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGATGCCCGACAAAC 518
Query 519 CAATGTTGCCCTCTTTGCTGATGGGAAGCTGTATTCTGCCACAGTGGCTGACTTCTTGGCCAGCGATGCCGTTA 592
||||||.|||||||||||||||||.||.||.||||||||||||||||||||.|||.|||||||.|||||.||.|
Sbjct 519 CAATGTCGCCCTCTTTGCTGATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCCTGGCCAGTGATGCTGTCA 592
Query 593 TTTATCGAAGCATGGGTGATGGATCTGCCCTTCGCACAATAAAATATGATTCCAAATGGATAAAAGAGCCACAC 666
||||..||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||
Sbjct 593 TTTACAGAAGCATGGGAGATGGATCTGCCCTTCGCACAATAAAATACGATTCCAAGTGGATCAAAGAACCACAC 666
Query 667 TTTCTTCATGCCATAGAATATGGAAACTATGTCTATTTCTTCTTTCGAGAAATCGCTGTCGAACATAATAATTT 740
||.|||||||||||||||||||||||||||||||||||||||||..||||||||||.||.|||||||||||.||
Sbjct 667 TTCCTTCATGCCATAGAATATGGAAACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGGAACATAATAACTT 740
Query 741 AGGCAAGGCTGTGTATTCCCGCGTGGCCCGCATATGTAAAAACGACATGGGTGGTTCCCAGCGGGTCCTGGAGA 814
|||||||||||||||||||||||||||.|||||.||||||||||||||||||||.||.||||||||||||||||
Sbjct 741 AGGCAAGGCTGTGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAGA 814
Query 815 AACACTGGACTTCATTTCTAAAGGCTCGGCTGAACTGTTCTGTCCCTGGAGATTCGTTTTTCTACTTTGATGTT 888
|||||||||||||.||.||.|||||||||||||||||.||.||.|||||||||||.|||||||||||.||.||.
Sbjct 815 AACACTGGACTTCCTTCCTTAAGGCTCGGCTGAACTGCTCCGTTCCTGGAGATTCCTTTTTCTACTTCGACGTC 888
Query 889 CTGCAGTCTATTACAGACATAATACAAATCAATGGCATCCCCACTGTGGTCGGGGTGTTTACCACGCAGCTCAA 962
|||||||||||.|||||||||||.||||||||||||||||||||||||||.|||||.||.|||||.||||||||
Sbjct 889 CTGCAGTCTATAACAGACATAATCCAAATCAATGGCATCCCCACTGTGGTTGGGGTCTTCACCACACAGCTCAA 962
Query 963 TAGCATCCCTGGTTCTGCTGTCTGTGCATTTAGCATGGATGACATTGAAAAAGTATTCAAAGGACGGTTTAAGG 1036
.|||||.|||||||||||.||||||||.|||||||||||.||||||||.|||||.||||||||.|||||.||.|
Sbjct 963 CAGCATTCCTGGTTCTGCAGTCTGTGCCTTTAGCATGGACGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAG 1036
Query 1037 AACAGAAAACTCCAGATTCTGTTTGGACAGCAGTTCCCGAAGACAAAGTGCCAAAGCCAAGGCCTGGCTGTTGT 1110
|.||||||||.|||||.||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||
Sbjct 1037 AGCAGAAAACCCCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCTGTTGT 1110
Query 1111 GCAAAACACGGCCTTGCCGAAGCTTATAAAACCTCCATCGATTTCCCGGATGAAACTCTGTCATTCATCAAATC 1184
||.|||||||||||.||.||||||||.||.|||||||||||.||.||.|||||.||.|||.|.||||||||.||
Sbjct 1111 GCCAAACACGGCCTCGCAGAAGCTTACAAGACCTCCATCGACTTTCCAGATGACACCCTGGCTTTCATCAAGTC 1184
Query 1185 TCATCCCCTGATGGACTCTGCCGTTCCACCCATTGCCGATGAGCCCTGGTTCACAAAGACTCGGGTCAGGTACA 1258
.||.||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1185 CCACCCGCTGATGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCTGGTTCACAAAGACACGGGTCAGGTACA 1258
Query 1259 GACTGACGGCCATCTCAGTGGACCATTCAGCCGGACCCTACCAGAACTACACAGTCATCTTTGTTGGCTCTGAA 1332
|..||||.||||||..||||||||.||||||.||.||.|||||.||||||||||||||||||||||||||||||
Sbjct 1259 GGTTGACAGCCATCGAAGTGGACCGTTCAGCAGGGCCATACCAAAACTACACAGTCATCTTTGTTGGCTCTGAA 1332
Query 1333 GCTGGCATGGTACTTAAAGTTCTGGCAAAGACCAGTCCTTTCTCTTTGAACGACAGCGTATTACTGGAAGAGAT 1406
||||||.||||||||||||||.|||||||||||||||||||||||.||||.|||||.||||||||.||||||||
Sbjct 1333 GCTGGCGTGGTACTTAAAGTTTTGGCAAAGACCAGTCCTTTCTCTCTGAATGACAGTGTATTACTCGAAGAGAT 1406
Query 1407 TGAAGCCTACAACCATGCAAAGTGCAGTGCTGAGAATGAGGAAGACAAAAAGGTCATCTCATTACAGTTGGATA 1480
||||||.||.||||..||.||||||||.||.||||.||||||.||||.||||||..|||||||||||.||||.|
Sbjct 1407 TGAAGCTTATAACCCAGCCAAGTGCAGCGCCGAGAGTGAGGAGGACAGAAAGGTGGTCTCATTACAGCTGGACA 1480
Query 1481 AAGATCACCACGCTTTATATGTGGCGTTCTCTAGCTGCATTATCCGCATCCCCCTCAGTCGCTGTGAGCGTTAT 1554
|.||||||||.||||||||.|||||.||||||||||||.|..||||||||||||||||.|||||||||||.||.
Sbjct 1481 AGGATCACCATGCTTTATACGTGGCCTTCTCTAGCTGCGTGGTCCGCATCCCCCTCAGCCGCTGTGAGCGCTAC 1554
Query 1555 GGATCATGTAAAAAGTCTTGTATTGCATCTCGTGACCCGTATTGTGGCTGGTTAAGCCAGGGATCCTGTGGTAG 1628
|||||.||||||||||||||.||||||||.|||||||||||.|||||.|||||||||||||||...||||..||
Sbjct 1555 GGATCGTGTAAAAAGTCTTGCATTGCATCACGTGACCCGTACTGTGGTTGGTTAAGCCAGGGAGTTTGTGAGAG 1628
Query 1629 AGTGACCCCAGGGATGCTGCTGTTAACCGAAGACTTCTTTGCTTTCCATAACCACAGTGCTGAAGGATATGAAC 1702
||||||||.||||||||||||||||||||||||||||||||||||||||||||||||..|||.|||||||||.|
Sbjct 1629 AGTGACCCTAGGGATGCTGCTGTTAACCGAAGACTTCTTTGCTTTCCATAACCACAGCCCTGGAGGATATGAGC 1702
Query 1703 AAGACACAGAATTCGGCAACACAGCTCATCTAGGGGACTGCCATGGTGTACGATGGGAAGT------------- 1763
|.|||||.||.|.||||||||||||.||.||||||||||||| |||| ||||
Sbjct 1703 AGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCC-------ACGA----AAGTTTGCCTCCTTCAA 1765
Query 1764 -----CCAG-----------TCTGGAGAGTCCAACCAGATGGTCCACATGAA--TGTCCTCATCACCTGTGTCT 1819
|||| |.|||.| |||||| ||..|| |||||.| |.||||||||..|||
Sbjct 1766 CTACACCAGATTACAAAATATTTGGCG-GTCCAA-CATCTG----ACATGGAGGTATCCTCATCTTCTG----- 1828
Query 1820 TTGCTGCTTTTGTTTTGGGGGCATTCATTGCAGGTGTGGC-AGTATACTGCTATCGAGACATGTTTGTTCGGAA 1892
||.|...|||||| ||||
Sbjct 1829 ---------------------------TTACCACTGTGGCAAGTA----------------------------- 1846
Query 1893 AAACAGAAAGATCCATAAAGATGCAGAGTCCGCCCAGTCATGCACAGACTCCAGTGGAAGTTTTGCCAAACTGA 1966
||||||..|| .||| .|.|||.|||
Sbjct 1847 -------------------------------GCCCAGAAAT-TACA------------------TCTAAAGTGA 1870
Query 1967 ATGGTCTCTTTGACAGCCCTGTCAAGGAATACCAACAGAATATTGATTCTCCTAAACTGTATAGTAACCTGCTA 2040
.|| |||||...||| |||||||||
Sbjct 1871 TTG-------------------------ATACCTGGAGA-----------CCTAAACTG--------------- 1893
Query 2041 ACCAGTCGGAAAGAGCTACCACCCAATGGAGATACTAAATCCATGGTAATGGACCATCGAGGGCAACCTCCAGA 2114
|.|||||.|| |||.|| |.|||.| ||.|||
Sbjct 1894 ----------ACGAGCTCCC-------GGAAAT----------TTGTAGT------------------TCAAGA 1922
Query 2115 GTTGGCTGCTCTTCC---TACTCCTGAGTCTACACCCGTGCT------TCACCAGAAGACCCTGCAGGCCATGA 2179
||.| || ||||.||||.|.||| ||.| |||.|||.| ||.||.
Sbjct 1923 --TGAC-------CCAAATACTTCTGATTTTAC-----TGATACTATATCAGCAGCA-ACTCTT---------- 1971
Query 2180 AGAGCCACTCAGAAAAGGCCCATGGCCATGGAGCTTCAAGGAAAGAAACCCCTCAGTTTTTTCCGTCTAGTCCG 2253
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2254 CCACCTCATTCCCCATTAAGTCATGGGCATATCCCCAGTGCCATTGTTCTTCCAAATGCTACCCATGACTACAA 2327
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2328 CACGTCTTTCTCAAACTCCAATGCTCACAAAGCTGAAAAGAAGCTTCAAAACATTGATCACCCTCTCACAAAGT 2401
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2402 CATCCAGTAAGAGAGATCACCGGCGTTCTGTTGATTCCAGAAATACCCTCAATGATCTCCTGAAGCATCTGAAT 2475
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2476 GACCCAAATAGTAACCCCAAAGCCATCATGGGAGACATCCAGATGGCACACCAGAACTTAATGCTGGATCCCAT 2549
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2550 GGGATCGATGTCTGAGGTCCCACCTAAAGTCCCTAACCGGGAGGCATCGCTATACTCCCCTCCTTCAACTCTCC 2623
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2624 CCAGAAATAGCCCAACCAAGCGAGTGGATGTCCCCACCACTCCTGGAGTCCCAATGACTTCTCTGGAAAGACAA 2697
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2698 AGAGGTTATCACAAAAATTCCTCCCAGAGGCACTCTATATCTGCTATGCCTAAAAACTTAAACTCACCAAATGG 2771
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2772 TGTTTTGTTATCCAGACAGCCTAGTATGAACCGTGGAGGATATATGCCCACCCCCACTGGGGCGAAGGTGGACT 2845
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2846 ATATTCAGGGAACACCAGTGAGTGTTCATCTGCAGCCTTCCCTCTCCAGACAGAGCAGCTACACCAGTAATGGC 2919
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2920 ACTCTTCCTAGGACGGGACTAAAGAGGACGCCGTCCTTAAAACCTGACGTGCCACCAAAGCCTTCCTTTGTTCC 2993
Sbjct 1972 -------------------------------------------------------------------------- 1971
Query 2994 TCAAACCCCATCTGTCAGACCACTGAACAAATACACATAC 3033
Sbjct 1972 ---------------------------------------- 1971
