Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04171
- Subject:
- XM_017317028.1
- Aligned Length:
- 3083
- Identities:
- 1687
- Gaps:
- 1165
Alignment
Query 1 ATGAGGGTCTTCCTGCTTTGTGCCTACATACTGCTGCTGATGGTTTCCCAGTTGAGGGCAGTCAGCTTTCCTGA 74
|||.||.||.|.||||||||...||.|.|.|||.|.||..||||.|||..|||..||||.||||||||.||.||
Sbjct 1 ATGGGGTTCCTTCTGCTTTGGTTCTGCGTGCTGTTCCTTCTGGTCTCCAGGTTACGGGCGGTCAGCTTCCCAGA 74
Query 75 AGATGATGAACCCCTTAATACTGTCGACTATCACTATTCAAGGCAATATCCGGTTTTTAGAGGACGCCCTTCAG 148
|||.|||||.|||||.||.||.||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGACGATGAGCCCCTCAACACGGTTGACTATCACTATTCAAGGCAATATCCGGTTTTTAGAGGACGCCCTTCAG 148
Query 149 GCAATGAATCGCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAATTCGAGACACACTTTATATTGCTGGCAGG 222
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAACGAATCGCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAATTCGAGACACACTTTATATTGCTGGCAGG 222
Query 223 GATCAAGTTTATACAGTAAACTTAAATGAAATGCCCAAAACAGAAGTAATACCCAACAAGAAACTGACATGGCG 296
||||||||.||||||||.||||||||||||||.|||.|||||||.||.|||||.|.||||||.|||||.|||.|
Sbjct 223 GATCAAGTCTATACAGTGAACTTAAATGAAATCCCCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGTGGAG 296
Query 297 ATCAAGACAACAGGATCGAGAAAACTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCACAACTTTATCAAAG 370
.||.|||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 297 GTCCAGACAGCAGGATCGAGAAAATTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCACAACTTCATCAAAG 370
Query 371 TATTTGTTCCAAGAAACGATGAGATGGTTTTTGTTTGTGGTACCAATGCATTCAATCCCATGTGTAGATACTAC 444
|.|||||.||||||||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.||||||||.
Sbjct 371 TCTTTGTCCCAAGAAATGATGAGATGGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGATGTGCAGATACTAT 444
Query 445 AGGTTGAGTACCTTAGAATATGATGGGGAAGAAATTAGTGGCCTGGCAAGATGCCCATTTGATGCCAGACAAAC 518
||||||||.||.|||||.||||||||||||||||||||||||||||||.|||||||.|||||||||.|||||||
Sbjct 445 AGGTTGAGAACGTTAGAGTATGATGGGGAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGATGCCCGACAAAC 518
Query 519 CAATGTTGCCCTCTTTGCTGATGGGAAGCTGTATTCTGCCACAGTGGCTGACTTCTTGGCCAGCGATGCCGTTA 592
||||||.|||||||||||||||||.||.||.||||||||||||||||||||.|||.|||||||.|||||.||.|
Sbjct 519 CAATGTCGCCCTCTTTGCTGATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCCTGGCCAGTGATGCTGTCA 592
Query 593 TTTATCGAAGCATGGGTGATGGATCTGCCCTTCGCACAATAAAATATGATTCCAAATGGATAAAAGAGCCACAC 666
||||..||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||
Sbjct 593 TTTACAGAAGCATGGGAGATGGATCTGCCCTTCGCACAATAAAATACGATTCCAAGTGGATCAAAGAACCACAC 666
Query 667 TTTCTTCATGCCATAGAATATGGAAACTATGTCTATTTCTTCTTTCGAGAAATCGCTGTCGAACATAATAATTT 740
||.|||||||||||||||||||||||||||||||||||||||||..||||||||||.||.|||||||||||.||
Sbjct 667 TTCCTTCATGCCATAGAATATGGAAACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGGAACATAATAACTT 740
Query 741 AGGCAAGGCTGTGTATTCCCGCGTGGCCCGCATATGTAAAAACGACATGGGTGGTTCCCAGCGGGTCCTGGAGA 814
|||||||||||||||||||||||||||.|||||.||||||||||||||||||||.||.||||||||||||||||
Sbjct 741 AGGCAAGGCTGTGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAGA 814
Query 815 AACACTGGACTTCATTTCTAAAGGCTCGGCTGAACTGTTCTGTCCCTGGAGATTCGTTTTTCTACTTTGATGTT 888
|||||||||||||.||.||.|||||||||||||||||.||.||.|||||||||||.|||||||||||.||.||.
Sbjct 815 AACACTGGACTTCCTTCCTTAAGGCTCGGCTGAACTGCTCCGTTCCTGGAGATTCCTTTTTCTACTTCGACGTC 888
Query 889 CTGCAGTCTATTACAGACATAATACAAATCAATGGCATCCCCACTGTGGTCGGGGTGTTTACCACGCAGCTCAA 962
|||||||||||.|||||||||||.||||||||||||||||||||||||||.|||||.||.|||||.||||||||
Sbjct 889 CTGCAGTCTATAACAGACATAATCCAAATCAATGGCATCCCCACTGTGGTTGGGGTCTTCACCACACAGCTCAA 962
Query 963 TAGCATCCCTGGTTCTGCTGTCTGTGCATTTAGCATGGATGACATTGAAAAAGTATTCAAAGGACGGTTTAAGG 1036
.|||||.|||||||||||.||||||||.|||||||||||.||||||||.|||||.||||||||.|||||.||.|
Sbjct 963 CAGCATTCCTGGTTCTGCAGTCTGTGCCTTTAGCATGGACGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAG 1036
Query 1037 AACAGAAAACTCCAGATTCTGTTTGGACAGCAGTTCCCGAAGACAAAGTGCCAAAGCCAAGGCCTGGCTGTTGT 1110
|.||||||||.|||||.||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||
Sbjct 1037 AGCAGAAAACCCCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCTGTTGT 1110
Query 1111 GCAAAACACGGCCTTGCCGAAGCTTATAAAACCTCCATCGATTTCCCGGATGAAACTCTGTCATTCATCAAATC 1184
||.|||||||||||.||.||||||||.||.|||||||||||.||.||.|||||.||.|||.|.||||||||.||
Sbjct 1111 GCCAAACACGGCCTCGCAGAAGCTTACAAGACCTCCATCGACTTTCCAGATGACACCCTGGCTTTCATCAAGTC 1184
Query 1185 TCATCCCCTGATGGACTCTGCCGTTCCACCCATTGCCGATGAGCCCTGGTTCACAAAGACTCGGGTCAGGTACA 1258
.||.||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1185 CCACCCGCTGATGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCTGGTTCACAAAGACACGGGTCAGGTACA 1258
Query 1259 GACTGACGGCCATCTCAGTGGACCATTCAGCCGGACCCTACCAGAACTACACAGTCATCTTTGTTGGCTCTGAA 1332
|..||||.||||||..||||||||.||||||.||.||.|||||.||||||||||||||||||||||||||||||
Sbjct 1259 GGTTGACAGCCATCGAAGTGGACCGTTCAGCAGGGCCATACCAAAACTACACAGTCATCTTTGTTGGCTCTGAA 1332
Query 1333 GCTGGCATGGTACTTAAAGTTCTGGCAAAGACCAGTCCTTTCTCTTTGAACGACAGCGTATTACTGGAAGAGAT 1406
||||||.||||||||||||||.|||||||||||||||||||||||.||||.|||||.||||||||.||||||||
Sbjct 1333 GCTGGCGTGGTACTTAAAGTTTTGGCAAAGACCAGTCCTTTCTCTCTGAATGACAGTGTATTACTCGAAGAGAT 1406
Query 1407 TGAAGCCTACAACCATGCAAAGTGCAGTGCTGAGAATGAGGAAGACAAAAAGGTCATCTCATTACAGTTGGATA 1480
||||||.||.||||..||.||||||||.||.||||.||||||.||||.||||||..|||||||||||.||||.|
Sbjct 1407 TGAAGCTTATAACCCAGCCAAGTGCAGCGCCGAGAGTGAGGAGGACAGAAAGGTGGTCTCATTACAGCTGGACA 1480
Query 1481 AAGATCACCACGCTTTATATGTGGCGTTCTCTAGCTGCATTATCCGCATCCCCCTCAGTCGCTGTGAGCGTTAT 1554
|.||||||||.||||||||.|||||.||||||||||||.|..||||||||||||||||.|||||||||||.||.
Sbjct 1481 AGGATCACCATGCTTTATACGTGGCCTTCTCTAGCTGCGTGGTCCGCATCCCCCTCAGCCGCTGTGAGCGCTAC 1554
Query 1555 GGATCATGTAAAAAGTCTTGTATTGCATCTCGTGACCCGTATTGTGGCTGGTTAAGCCAGGGATCCTGTGGTAG 1628
|||||.||||||||||||||.||||||||.|||||||||||.|||||.|||||||||||||||...||||..||
Sbjct 1555 GGATCGTGTAAAAAGTCTTGCATTGCATCACGTGACCCGTACTGTGGTTGGTTAAGCCAGGGAGTTTGTGAGAG 1628
Query 1629 AGTGACCCCAGGGATGCTGCTGTTAACCGAAGACTTCTTTGCTTTCCATAACCACAGTGCTGAAGGATATGAAC 1702
||||||||.||||||||||||||||||||||||||||||||||||||||||||||||..|||.|||||||||.|
Sbjct 1629 AGTGACCCTAGGGATGCTGCTGTTAACCGAAGACTTCTTTGCTTTCCATAACCACAGCCCTGGAGGATATGAGC 1702
Query 1703 AAGACACAGAATTCGGCAACACAGCTCATCTAGGGGACTGCCATGGTGTACGATGGGAAGT------------- 1763
|.|||||.||.|.||||||||||||.||.||||||||||||| |||| ||||
Sbjct 1703 AGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCC-------ACGA----AAGTTTGCCTCCTTCAA 1765
Query 1764 -----CCAG-----------TCTGGAGAGTCCAACCAGATGGTCCACATGAA--TGTCCTCATCACCTGTGTCT 1819
|||| |.|||.| |||||| ||..|| |||||.| |.||||||||..|||
Sbjct 1766 CTACACCAGATTACAAAATATTTGGCG-GTCCAA-CATCTG----ACATGGAGGTATCCTCATCTTCTG----- 1828
Query 1820 TTGCTGCTTTTGTTTTGGGGGCATTCATTGCAGGTGTGGC-AGTATACTGCTATCGAGACATGTTTGTTCGGAA 1892
||.|...|||||| ||||..|
Sbjct 1829 ---------------------------TTACCACTGTGGCAAGTAGCC-------------------------- 1849
Query 1893 AAACAGAA---AGATCCATAAAGATGCAGAGTCCGCCCAGTCATGCAC----AGACTCCAGTGGAAGTTTTGCC 1959
||||| |.||| ||||| || |.|.|| || |||| |.
Sbjct 1850 ---CAGAAATTACATC--TAAAG-TG------------ATTGAT--ACCTGGAGAC----------------CT 1887
Query 1960 AAACTGAATGGTCTC-------TTTGACAGCCCTGTCAAGGAAT-ACCAACAGAATATTGATTCTCCT-AAACT 2024
|||||| |.|..||| |||| .|| .||||| || |||.|.|.|.|..|||||.|.|| |.|||
Sbjct 1888 AAACTG-ACGAGCTCCCGGAAATTTG-TAG----TTCAAG--ATGACCCAAATACTTCTGATTTTACTGATACT 1953
Query 2025 GTAT-AGTAAC-CTGCTAACCAGTCGGAAAGAGCTACCACCCAATGGAGATACTAAATCCATGGTAATGGACCA 2096
.||| ||.||| ||.
Sbjct 1954 ATATCAGCAACTCTT----------------------------------------------------------- 1968
Query 2097 TCGAGGGCAACCTCCAGAGTTGGCTGCTCTTCCTACTCCTGAGTCTACACCCGTGCTTCACCAGAAGACCCTGC 2170
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2171 AGGCCATGAAGAGCCACTCAGAAAAGGCCCATGGCCATGGAGCTTCAAGGAAAGAAACCCCTCAGTTTTTTCCG 2244
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2245 TCTAGTCCGCCACCTCATTCCCCATTAAGTCATGGGCATATCCCCAGTGCCATTGTTCTTCCAAATGCTACCCA 2318
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2319 TGACTACAACACGTCTTTCTCAAACTCCAATGCTCACAAAGCTGAAAAGAAGCTTCAAAACATTGATCACCCTC 2392
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2393 TCACAAAGTCATCCAGTAAGAGAGATCACCGGCGTTCTGTTGATTCCAGAAATACCCTCAATGATCTCCTGAAG 2466
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2467 CATCTGAATGACCCAAATAGTAACCCCAAAGCCATCATGGGAGACATCCAGATGGCACACCAGAACTTAATGCT 2540
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2541 GGATCCCATGGGATCGATGTCTGAGGTCCCACCTAAAGTCCCTAACCGGGAGGCATCGCTATACTCCCCTCCTT 2614
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2615 CAACTCTCCCCAGAAATAGCCCAACCAAGCGAGTGGATGTCCCCACCACTCCTGGAGTCCCAATGACTTCTCTG 2688
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2689 GAAAGACAAAGAGGTTATCACAAAAATTCCTCCCAGAGGCACTCTATATCTGCTATGCCTAAAAACTTAAACTC 2762
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2763 ACCAAATGGTGTTTTGTTATCCAGACAGCCTAGTATGAACCGTGGAGGATATATGCCCACCCCCACTGGGGCGA 2836
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2837 AGGTGGACTATATTCAGGGAACACCAGTGAGTGTTCATCTGCAGCCTTCCCTCTCCAGACAGAGCAGCTACACC 2910
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2911 AGTAATGGCACTCTTCCTAGGACGGGACTAAAGAGGACGCCGTCCTTAAAACCTGACGTGCCACCAAAGCCTTC 2984
Sbjct 1969 -------------------------------------------------------------------------- 1968
Query 2985 CTTTGTTCCTCAAACCCCATCTGTCAGACCACTGAACAAATACACATAC 3033
Sbjct 1969 ------------------------------------------------- 1968
