Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04228
- Subject:
- XM_006529816.3
- Aligned Length:
- 1212
- Identities:
- 679
- Gaps:
- 441
Alignment
Query 1 ATGGACCTCTTCGGGGACCTGCCGGAGCCCGAGCGCTCGCCGCGCCCGGCTGCCGGGAAAGAAGCTCAGAAAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACCCCTGCTCTTTGATGACCTCCCTCCGGCCAGCAGTACTGACTCAGGATCAGGGGGACCTTTGCTTTTTGATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATCTCCCACCCGCTAGCAGTGGCGATTCAGGTTCTCTTGCCACATCAATATCCCAGATGGTAAAGACTGAAGGG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAAGGAGCAAAGAGAAAAACCTCCGAGGAAGAGAAGAATGGCAGTGAAGAGCTTGTGGAAAAGAAAGTTTGTAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGCCTCTTCGGTGATCTTTGGTCTGAAGGGCTATGTGGCTGAGCGGAAGGGTGAGAGGGAGGAGATGCAGGATG 370
||||||||||
Sbjct 1 ----------------------------------------------------------------ATGCAGGATG 10
Query 371 CCCACGTCATCCTGAACGACATCACCGAGGAGTGTAGGCCCCCATCGTCCCTCATTACTCGGGTTTCATATTTT 444
||||.||||||||||||||.|||||..|||||||||..||.|||||.||.||||||||||||||||||||.|||
Sbjct 11 CCCATGTCATCCTGAACGATATCACTCAGGAGTGTAATCCTCCATCATCTCTCATTACTCGGGTTTCATACTTT 84
Query 445 GCTGTTTTTGATGGACATGGAGGAATTCGAGCCTCAAAATTTGCTGCACAGAATTTGCATCAAAACTTAATCAG 518
|||||.||||||||||||||||||||.||||||||.|||||||||||||||||||||||.||.|||||||||||
Sbjct 85 GCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAATTTGCACCAGAACTTAATCAG 158
Query 519 AAAATTTCCTAAAGGAGATGTAATCAGTGTAGAGAAAACCGTGAAGAGATGCCTTTTGGACACTTTCAAGCATA 592
.||||||||||||||||||.||||||||||.|||||.||.||.|||||.||.||..|.||.|||||.|||||.|
Sbjct 159 GAAATTTCCTAAAGGAGATATAATCAGTGTGGAGAAGACTGTAAAGAGGTGTCTGCTAGATACTTTTAAGCACA 232
Query 593 CTGATGAAGAGTTCCTTAAACAAGCTTCCAGCCAGAAGCCTGCCTGGAAAGATGGGTCCACTGCCACGTGTGTT 666
|.||||||||||||||.|||||.|||||.|||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 233 CCGATGAAGAGTTCCTGAAACAGGCTTCAAGCCAGAAGCCTGCCTGGAAAGACGGGTCCACTGCCACGTGTGTC 306
Query 667 CTGGCTGTAGACAACATTCTTTATATTGCCAACCTCGGAGATAGTCGGGCAATCTTGTGTCGTTATAATGAGGA 740
||||||||.||||||||.||.|||||.||||||||.||||||||||||||||||.|||||||.|||||||||||
Sbjct 307 CTGGCTGTGGACAACATCCTGTATATCGCCAACCTTGGAGATAGTCGGGCAATCCTGTGTCGATATAATGAGGA 380
Query 741 GAGTCAAAAACATGCAGCCTTAAGCCTCAGCAAAGAGCATAATCCAACTCAGTATGAAGAGCGGATGAGGATAC 814
.|||||.||.||.||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||||
Sbjct 381 AAGTCAGAAGCACGCAGCCTTAAGCCTCAGCAAAGAGCACAACCCAACTCAGTATGAAGAGCGCATGAGGATAC 454
Query 815 AGAAGGCTGGAGGAAACGTCAGGGATGGGCGTGTTTTGGGCGTGCTAGAGGTGTCACGCTCCATTGGGGACGGG 888
||||.||||||||.||.|||||.|||||||||||.|||||||||||.|||||.||.||.||||||||.||.|||
Sbjct 455 AGAAAGCTGGAGGGAATGTCAGAGATGGGCGTGTCTTGGGCGTGCTGGAGGTATCGCGTTCCATTGGAGATGGG 528
Query 889 CAGTACAAGCGCTGCGGTGTCACCTCTGTGCCCGACATCAGACGCTGCCAGCTGACCCCCAATGACAGGTTCAT 962
||||||||||||||.||.|||||.||||||||.||.||||||||||||||||||||||||||||||||||||||
Sbjct 529 CAGTACAAGCGCTGTGGGGTCACATCTGTGCCTGATATCAGACGCTGCCAGCTGACCCCCAATGACAGGTTCAT 602
Query 963 TTTGTTGGCCTGTGATGGGCTCTTCAAGGTCTTTACCCCAGAAGAAGCCGTGAACTTCATCTTGTCCTGTCTCG 1036
||||.||||.||.||.|||||.||||||||||||||||||||||||||.||||||||||||||||||||.||.|
Sbjct 603 TTTGCTGGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGAAGAAGCTGTGAACTTCATCTTGTCCTGCCTTG 676
Query 1037 AGGAT----GAAAA-------------GATCCAG--ACCCGGGAAGGGAAGTCCGCAG-------CCGACGCCC 1084
|||.| ||.|| |.|||.| .||| .||||.| ||.||..|| |.|.||.||
Sbjct 677 AGGTTCCTAGACAACTTCATTCATCTCGTTCCTGTTTCCC-TGAAGTG-AGCCCTGAGAGGATGACTGTCGTCC 748
Query 1085 --GC-TACGAAGCAGCCTG-CAA---CAGGCTGGCCAACAAG-GC--GGTGCAGCGGGGCTCGGCCGACAACGT 1148
|| ||| |..||| ||| ||| |||| || || |||.| ||| ||| |
Sbjct 749 TGGCTTAC-ACCCAG-CTGTCAATCTCAGG----------AGTGCTTGGTTC------GCT--GCC-------T 795
Query 1149 CACTGTGATGGTGGTGCGGATAGGGCAC 1176
.|.|| ||||||.
Sbjct 796 GAGTG-GATGGTC--------------- 807
