Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04233
- Subject:
- XM_011509459.2
- Aligned Length:
- 1729
- Identities:
- 631
- Gaps:
- 1001
Alignment
Query 1 ATGTTGCTCTTATTCAGTGTAATCCTAATCTCATGGGTATCCACTGTTGGGGGAGAAGGAACACTTTGTGATTT 74
|...|.||||||||
Sbjct 1 ------------------------------------------------------------ATGTTCTGTGATTT 14
Query 75 TCCAAAAATACACCATGGATTTCTGTATGATGAAGAAGATTATAACCCTTTTTCCCAAGTTCCTACAGGGGAAG 148
||||||||||.||||||||.||||.||||||||||||.|.|||||.||.|||||||||||||||||||||||||
Sbjct 15 TCCAAAAATAAACCATGGAATTCTATATGATGAAGAAAAATATAAGCCATTTTCCCAAGTTCCTACAGGGGAAG 88
Query 149 TTTTCTATTACTCCTGTGAATATAATTTTGTGTCTCCTTCAAAATCCTTTTGGACTCGCATAACATGCACAGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||
Sbjct 89 TTTTCTATTACTCCTGTGAATATAATTTTGTGTCTCCTTCAAAATCCTTTTGGACTCGCATAACGTGCGCAGAA 162
Query 223 GAAGGATGGTCACCAACACCGAAGTGTCTCAGAATGTGTTCCTTTCCTTTTGTGAAAAATGGTCATTCTGAATC 296
||||||||||||||||||||.||||||||||||.||||||.|||||||||||||.|||||||||||||||||||
Sbjct 163 GAAGGATGGTCACCAACACCAAAGTGTCTCAGACTGTGTTTCTTTCCTTTTGTGGAAAATGGTCATTCTGAATC 236
Query 297 TTCAGGACTAATACATCTGGAAGGTGATACTGTACAAATTATTTGCAACACAGGATACAGCCTTCAAAACAATG 370
||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 237 TTCAGGACAAACACATCTGGAAGGTGATACTGTACAAATTATTTGCAACACAGGATACAGACTTCAAAACAATG 310
Query 371 AGAAAAACATTTCGTGTGTAGAACGGGGCTGGTCCACTCCTCCCATATGCAGCTTCACTAAAGGAGAATGTCAT 444
||||.||||||||.|||||||||||||||||||||||||||||||.||||||.|.||||
Sbjct 311 AGAACAACATTTCATGTGTAGAACGGGGCTGGTCCACTCCTCCCAAATGCAGGTCCACT--------------- 369
Query 445 GTTCCAATTTTAGAAGCCAATGTAGATGCTCAGCCAAAAAAAGAAAGCTACAAAGTTGGAGACGTGTTGAAATT 518
||||
Sbjct 370 ------ATTT---------------------------------------------------------------- 373
Query 519 CTCCTGCAGAAAAAATCTTATAAGAGTTGGATCAGACTCAGTTCAATGTTACCAATTTGGGTGGTCACCTAACT 592
|||||||||||
Sbjct 374 ---CTGCAGAAAAA------------------------------------------------------------ 384
Query 593 TTCCAACATGCAAAGGACAAGTACGATCATGTGGTCCACCTCCTCAACTCTCCAATGGTGAAGTTAAGGAGATA 666
Sbjct 385 -------------------------------------------------------------------------- 384
Query 667 AGAAAAGAGGAATATGGACACAATGAAGTAGTGGAATATGATTGCAATCCTAATTTTATAATAAACGGGCCTAA 740
Sbjct 385 -------------------------------------------------------------------------- 384
Query 741 GAAAATACAATGTGTGGATGGAGAATGGACAACTTTACCCACTTGTGTTGAACAAGTGAAAACATGTGGATACA 814
Sbjct 385 -------------------------------------------------------------------------- 384
Query 815 TACCTGAACTCGAGTACGGTTATGTTCAGCCGTCTGTCCCTCCCTATCAACATGGAGTTTCAGTCGAGGTGAAT 888
Sbjct 385 -------------------------------------------------------------------------- 384
Query 889 TGCAGAAATGAATATGCAATGATTGGAAATAACATGATTACCTGTATTAATGGAATATGGACAGAGCTTCCTAT 962
Sbjct 385 -------------------------------------------------------------------------- 384
Query 963 GTGTGTTGCAACACACCAACTTAAGAGGTGCAAAATAGCAGGAGTTAATATAAAAACATTACTCAAGCTATCTG 1036
Sbjct 385 -------------------------------------------------------------------------- 384
Query 1037 GGAAAGAATTTAATCATAATTCTAGAATACGTTACAGATGTTCAGACATCTTCAGATACAGGCACTCAGTCTGT 1110
Sbjct 385 -------------------------------------------------------------------------- 384
Query 1111 ATAAACGGGAAATGGAATCCTGAAGTAGACTGCACAGAAAAAAGGGAACAATTCTGCCCACCGCCACCTCAGAT 1184
Sbjct 385 -------------------------------------------------------------------------- 384
Query 1185 ACCTAATGCTCAGAATATGACAACCACAGTGAATTATCAGGATGGAGAAAAAGTAGCTGTTCTCTGTAAAGAAA 1258
Sbjct 385 -------------------------------------------------------------------------- 384
Query 1259 ACTATCTACTTCCAGAAGCAAAAGAAATTGTATGTAAAGATGGACGATGGCAATCATTACCACGCTGTGTTGAG 1332
Sbjct 385 -------------------------------------------------------------------------- 384
Query 1333 TCTACTGCATATTGTGGGCCCCCTCCATCTATTAACAATGGAGATACCACCTCATTCCCATTATCAGTATATCC 1406
|||||||||||||||.|||||.||||||||||.|..||.|||||||..||.|||||||||.|
Sbjct 385 ------------TGTGGGCCCCCTCCACCTATTGACAATGGAGACATTACTTCATTCCTGTTGTCAGTATATGC 446
Query 1407 TCCAGGGTCAACAG-TGACGTACCGTTGCCAGTCCTTCTATAAACTCCAGGGCTCTGTAAC-----TGTAACAT 1474
||||||.|||.||| ||| |||||..||||||..|||.|||.||||..||| ||||| ..||||||
Sbjct 447 TCCAGGTTCATCAGTTGA-GTACCAGTGCCAGAACTTGTATCAACTTGAGG-----GTAACAATCAAATAACAT 514
Query 1475 GCAGAAATAAACAGTGGTCAGAACCACCAAGATGCCTAGATCCATGTGTGGTATCTGAAGAAAACATGAACAAA 1548
|.|||||...|||.||||||||||||||||.||||.|||||||||||||..||||..||||||..|||.|.|||
Sbjct 515 GTAGAAACGGACAATGGTCAGAACCACCAAAATGCTTAGATCCATGTGTAATATCACAAGAAATTATGGAAAAA 588
Query 1549 AATAACATACAGTTAAAATGGAGAAACGATGGAAAACTCTATGCAAAAACAGGGGATGCTGTTGAATTCCAGTG 1622
.||||||||.|.|||||.||||.||||.|...|||.||.|||.|||.||||||.||....||||||||....||
Sbjct 589 TATAACATAAAATTAAAGTGGACAAACCAACAAAAGCTTTATTCAAGAACAGGTGACATAGTTGAATTTGTTTG 662
Query 1623 TAAAT----------TCCCACATAAAGCGATGATATCATCACCACCATTTCGAGCAATCTGTCAGGAAGGGAAA 1686
||||| |||.|||.| ||.|||| .|||||||||||||.||||||.|.||||||
Sbjct 663 TAAATCTGGATATCATCCAACAAA--------ATCTCAT-----TCATTTCGAGCAATGTGTCAGAATGGGAAA 723
Query 1687 TTTGAATATCCTATATGTGAA------ 1707
.|.|.||||||.|..||||||
Sbjct 724 CTGGTATATCCCAGTTGTGAAGAAAAA 750
