Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04314
• Subject: XM_017009962.1
• Aligned Length: 1256
• Identities: 682
• Gaps: 565

Alignment

Query    1  ATGTCTATTTCCTTGAGCTCTTTAATTTTGTTGCCAATTTGGATAAACATGGCACAAATCCAGCAGGGAGGTCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGATGAAAAAGAAAAGACTACCGCACTGAAAGATTTATTATCTAGGATAGATTTGGATGAACTAATGAAAAAAG  148
                                                                            ||||||||||
Sbjct    1  ----------------------------------------------------------------ATGAAAAAAG  10

Query  149  ATGAACCGCCTCTTGATTTTCCTGATACCCTGGAAGGATTTGAATATGCTTTTAATGAAAAGGGACAGTTAAGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   11  ATGAACCGCCTCTTGATTTTCCTGATACCCTGGAAGGATTTGAATATGCTTTTAATGAAAAGGGACAGTTAAGA  84

Query  223  CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGGGAAGATTTACACAGATGGAACCAGAAAAGATACGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   85  CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGGGAAGATTTACACAGATGGAACCAGAAAAGATACGA  158

Query  297  GGCTCTAGGAGAGATCATCACGAAGTATGTATATGAGCTCCTGGAAAAGGATTGTAATTTGAAAAAAGTATCTA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  159  GGCTCTAGGAGAGATCATCACGAAGTATGTATATGAGCTCCTGGAAAAGGATTGTAATTTGAAAAAAGTATCTA  232

Query  371  TTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCACAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  233  TTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCACAG  306

Query  445  AAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGGCAGTGGGCTAGAAGACTTATTATAAATGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  307  AAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGGCAGTGGGCTAGAAGACTTATTATAAATGA  380

Query  519  AGATCTGGACAGTGGCACACAGATACCGTTTATTAAAAGAGCTGTGGCTGAAGGATATGGAGTAATAGTACTAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  381  AGATCTGGACAGTGGCACACAGATACCGTTTATTAAAAGAGCTGTGGCTGAAGGATATGGAGTAATAGTACTAA  454

Query  593  ATCCCAATGAAAACTATATTGAAGTAGAAAAGCCGAAGATACACGTACAGTCATCATCTGATAGTTCAGATGAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  455  ATCCCAATGAAAACTATATTGAAGTAGAAAAGCCGAAGATACACGTACAGTCATCATCTGATAGTTCAGATGAA  528

Query  667  CCAGCAGAAAAACGGGAAAGAAAAGATAAAGTTTCTAAAGAAACAAAGAAGCGACGTGATTTCTATGAGAAGTA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  529  CCAGCAGAAAAACGGGAAAGAAAAGATAAAGTTTCTAAAGAAACAAAGAAGCGACGTGATTTCTATGAGAAGTA  602

Query  741  TCGTAACCCCCAAAGAGAAAAAGAAATGATGCAATTGTATATCAGA--------GAAAATGGTTCTCCTGAAGA  806
            ||||||||||||||||||||||||||||||||||||||||||||||        ||||| ..||| ||| .|||
Sbjct  603  TCGTAACCCCCAAAGAGAAAAAGAAATGATGCAATTGTATATCAGAAGGAGAGTGAAAA-AATTC-CCT-CAGA  673

Query  807  ACATGCAATCTATGTTTGGGATCATTTCATAGCTCAGGCTGCTGCTGAGAATGTGTTTTTCGTTGCTCACAGCT  880
            |     |.||| |||                  .|||.||||||.|.|.|                        
Sbjct  674  A-----ATTCT-TGT------------------ACAGACTGCTGATAAAA------------------------  699

Query  881  ATGGAGGACTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCCGATGTAAAAAATAAGGTAACTGCTGTGGCA  954
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query  955  TTGACAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACGATTCGAGAATGGATGAGAGAGAACTG  1028
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1029  TTGTAATTGGGTCTCTAGCTCAGAACCATTAGACACATCAGTGGAGTCCATGCTACCTGATTGCCCCCGGGTCT  1102
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1103  CAGCAGGCACCGACCGTCACGAGCTAACTTCCTGGAAGAGCTTTCCGTCTATTTTCAAATTCTTTACCGAAGCC  1176
                                                                                      
Sbjct  700  --------------------------------------------------------------------------  699

Query 1177  TCAGAGGCCAAGACCAGCTCCCTGAAGCCGGCTGTGACGCGCCGCTCCCACCGCATCAAGCACGAAGAGCTG  1248
                                                                                    
Sbjct  700  ------------------------------------------------------------------------  699