Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04314
- Subject:
- XM_017315582.1
- Aligned Length:
- 1350
- Identities:
- 524
- Gaps:
- 765
Alignment
Query 1 ---ATGTCT--ATTTCCT-----------TGAGCTCTTTAATTTTGT-----TGCCAAT-TTG---GATAAA-- 47
|.||.| |||.||| .|.||..|..||.||.|| .||..|| ||| ||.|||
Sbjct 1 ATGACGTTTAAATTCCCTGCAGACCCGGAAGTGCAATCGAACTTGGTCGGGGCGCGGATCTTGAGAGAGAAAGT 74
Query 48 ------CATGGCACAAATCCAGCAGGGAG---GTCCAGA----TGAAAAAGAA----AAGACT------ACC-- 96
||.|||.|| |||||| |.||||| || ||| |.|.|| |||
Sbjct 75 CCGAGCCAGGGCGCA--------AGGGAGTTCGCCCAGAGATCTG-----GAAGGCCACGCCTCCTCGCACCTA 135
Query 97 --------GCACTGAA----------------AGATTTATTATCTAGGATAGATTTGGATGAACTAATGAAAAA 146
|||.||.| ||||||..|.||||||||.||||||||||||||.||||||||
Sbjct 136 CCCTCTCAGCATTGCAGCTGGGGACAGAGCTCAGATTTGCTGTCTAGGATCGATTTGGATGAACTCATGAAAAA 209
Query 147 AGATGAACCGCCTCTTGATTTTCCTGATACCCTGGAAGGATTTGAATATGCTTTTAATGAAAAGGGACAGTTAA 220
.||.|||||.|||.||||||||||.|||||.||||||||.||||||||||||||||||||||||||.|||||||
Sbjct 210 GGACGAACCACCTTTTGATTTTCCAGATACACTGGAAGGCTTTGAATATGCTTTTAATGAAAAGGGGCAGTTAA 283
Query 221 GACACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGGGAAGATTTACACAGATGGAACCAGAAAAGATAC 294
||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||||||||||||||.
Sbjct 284 GACACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGAGAAGACTTACACAGGTGGAACCAGAAAAGATAT 357
Query 295 GAGGCTCTAGGAGAGATCATCACGAAG-TATGTATATGAGCTCCTGGAAAAGGATTGTAATTTGAAAAAAGTAT 367
||.|||||.||.||||||||||| ||| |||||.||||||||||||||||..||.|||||||||||||||.|.|
Sbjct 358 GAAGCTCTGGGCGAGATCATCAC-AAGATATGTTTATGAGCTCCTGGAAAGTGACTGTAATTTGAAAAAAATCT 430
Query 368 CTATTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCA 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 431 CTATTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCA 504
Query 442 CAGAAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGGCAGTGGGCTAGAAGACTTATTATAAA 515
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.||
Sbjct 505 CAGAAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGTCAGTGGGCTAGAAGGCTTATTATTAA 578
Query 516 TGAAGATCTGGACAGTGGCACACAGATACCGTTTATTAAAAGAGCTGTGGCTG--------------------A 569
||||||||||||||||||||||||||||||.||||||||.||||||.|||.|| |
Sbjct 579 TGAAGATCTGGACAGTGGCACACAGATACCTTTTATTAAGAGAGCTATGGATGCGTTTCTGCTTGTGTGTGTAA 652
Query 570 AGGATATGG---AGTAATAGTACTAAAT--CCCAATGAAAACTATATTGAAGTAGAAAAGCCGAAGATACACGT 638
||| || ||||| |.||.|| ||| ||.||.|..|
Sbjct 653 AGG----GGGAAAGTAA----AGTAGATGGCCC--TGCAATCCTT----------------------------- 687
Query 639 ACAGTCATCATCTGATAGTTCAGATGAACCAGCAGAAAAACGGGAAAGAAAAGATAAAGTTTCTAAAGAAACAA 712
Sbjct 688 -------------------------------------------------------------------------- 687
Query 713 AGAAGCGACGTGATTTCTATGAGAAGTATCGTAACCCCCAAAGAGAAAAAGAAATGATGCAATTGTATATCAGA 786
Sbjct 688 -------------------------------------------------------------------------- 687
Query 787 GAAAATGGTTCTCCTGAAGAACATGCAATCTATGTTTGGGATCATTTCATAGCTCAGGCTGCTGCTGAGAATGT 860
Sbjct 688 -------------------------------------------------------------------------- 687
Query 861 GTTTTTCGTTGCTCACAGCTATGGAGGACTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCCGATGTAAAAA 934
Sbjct 688 -------------------------------------------------------------------------- 687
Query 935 ATAAGGTAACTGCTGTGGCATTGACAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACGATTCGA 1008
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1009 GAATGGATGAGAGAGAACTGTTGTAATTGGGTCTCTAGCTCAGAACCATTAGACACATCAGTGGAGTCCATGCT 1082
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1083 ACCTGATTGCCCCCGGGTCTCAGCAGGCACCGACCGTCACGAGCTAACTTCCTGGAAGAGCTTTCCGTCTATTT 1156
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1157 TCAAATTCTTTACCGAAGCCTCAGAGGCCAAGACCAGCTCCCTGAAGCCGGCTGTGACGCGCCGCTCCCACCGC 1230
Sbjct 688 -------------------------------------------------------------------------- 687
Query 1231 ATCAAGCACGAAGAGCTG 1248
Sbjct 688 ------------------ 687
