Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04329
- Subject:
- NR_136595.2
- Aligned Length:
- 4657
- Identities:
- 558
- Gaps:
- 4099
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGGCGCCTGCTCAGCGACTGATGCACAGACTGCTGCAGAGGCTGCCGGTTTTCCCAACTTCTAGAGACGGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTCATTACCAGGCATCCTTCCCATGTAGGCATCGAGAAGAAGGCTGAGGGACCCTCGCACCAGATTTCCATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGAGACCGATACGAGTGCGTCCATTCCTGTTGCCAGCTCCTGCGCCCTCCGGACTAACCTCAAAAACCAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACTGCCTGCTCTTCTAAATTGTGTGTCCCAAAATATTTCATTAACAAGTATCAAGTGATAATCCATGGAAAA 296
Query 1 --------------------------------------------------ATGGGATTGCTAGACAGACTTTCA 24
||||||||||||||||||||||||
Sbjct 297 GTGATGGAAAGTCACAATACAAGCTGGTTTGTAAATATTTGAATCACATTATGGGATTGCTAGACAGACTTTCA 370
Query 25 GTCTTGCTTGGCCTGAAGAAGAAGGAGGTTCATGTTTTGTGCCTTGGGCTAGATAATAGTGGCAAAACGACGAT 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTCTTGCTTGGCCTGAAGAAGAAGGAGGTTCATGTTTTGTGCCTTGGGCTAGATAATAGTGGCAAAACGACGAT 444
Query 99 CATTAACAAACTTAAACCTTCAAATGCTCAATCTCAAAATATCCTTCCAACAATAGGATTCAGCATAGAGAAAT 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATTAACAAACTTAAACCTTCAAATGCTCAATCTCAAAATATCCTTCCAACAATAGGATTCAGCATAGAGAAAT 518
Query 173 TCAAATCATCCAGTTTGTCATTTACAGTGTTTGACATGTCAGGTCAAGGAAGATACAGAAATCTCTGGGAACAC 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAAATCATCCAGTTTGTCATTTACAGTGTTTGACATGTCAGGTCAAGGAAGATACAGAAATCTCTGGGAACAC 592
Query 247 TATTATAAAGAAGGCCAAGCTATTATTTTTGTCATTGATAGTAGTGATAGATTAAGAATGGTTGTGGCCAAAGA 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TATTATAAAGAAGGCCAAGCTATTATTTTTGTCATTGATAGTAGTGATAGATTAAGAATGGTTGTGGCCAAAGA 666
Query 321 AGAACTCGATACTCTTCTGAATCATCCAGATATTAAACACCGTCGAATTCCAATCTTATTCTTTGCAAATAAAA 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAACTCGATACTCTTCTGAATCATCCAGATATTAAACACCGTCGAATTCCAATCTTATTCTTTGCAAATAAAA 740
Query 395 TGGATCTTAGAGATGCAGTGACATCTGTAAAAGTGTCTCAGTTGCTGTGTTTAGAGAACATCAAAGATAAACCC 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGATCTTAGAGATGCAGTGACATCTGTAAAAGTGTCTCAGTTGCTGTGTTTAGAGAACATCAAAGATAAACCC 814
Query 469 TGGCATATTT---------------------------------------------------------------- 478
||||||||||
Sbjct 815 TGGCATATTTGATGCTAAAACTGAAGACAGAAGAGTTCAATGACCTAGTCAAGCTCCCTCAGCTAATAAGAAAA 888
Query 479 -------------------------------------------------------------------------- 478
Sbjct 889 TGATTGAGATCTACCGACTTTTTGTTTTACTCTACCAGCTTACCAAACCTATAATTATGGGTTTTTATCCTAAA 962
Query 479 -------------------------------------------------------------------------- 478
Sbjct 963 GATATCAAATTCCATTTCAAACAAAGGCACACCATAATATGGCTGTATTATAACTCAAGTCAAGCATTTCTAAT 1036
Query 479 -------------------------------------------------------------------------- 478
Sbjct 1037 AATGAGATTGAATGATTGGAACTGAGCAAAGTAGGATAGTGGGCTGTACAAAACTTTTCTACCACTGGAAAAAT 1110
Query 479 -------------------------------------------------------------------------- 478
Sbjct 1111 AAAAGTATTTGTTTTGTTAATGTCAGTGTAAGAACTAATCCTGGGATAAAATAACTTTTTTCAAAATCTGTTTA 1184
Query 479 -------------------------------------------------------------------------- 478
Sbjct 1185 TAAATTGTAAACATATCTTGTTCCTGAGCACTCAGACTTTTATTTTCTGTTTATTTTCAATTTCAATGCTTAAC 1258
Query 479 -------------------------------------------------------------------------- 478
Sbjct 1259 CAGTTTTGCTCAGATATATGTTGTTATAATGTGTTAATTCTCCATATGGCAAAATTGTAATCCTTTATTCTTAT 1332
Query 479 -------------------------------------------------GTGCTAGTGATGCCATAAAAGGAGA 503
|||||||||||||||||||||||||
Sbjct 1333 AGTTTTGTGATGTAATGAGATGGCTATGTTTCTTATGGATTTCATTTCAGTGCTAGTGATGCCATAAAAGGAGA 1406
Query 504 AGGCTTGCAAGAAGGTGTAGACTGGCTTCAAG-------------ATCAGATCCAGACTGTGAAGACA------ 558
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1407 AGGCTTGCAAGAAGGTGTAGACTGGCTTCAAGAAAAAACAATACAATCAGATCCAGACTGTGAAGACATGAAAA 1480
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1481 GATAATAGTTGGAAACCTCAGCAATTTTCAATTCAAGGAATCTATCTAAGACAAATAGAATACATTTTGTAAAA 1554
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1555 GATGTTTATGCATCAAAAAATATAATTTTCTGCTTGCATTTATGGACTCTGACCTTTTTAAGAACATAGGACTT 1628
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1629 CAGGTATGCTAATTTGGCCATTAATTATTTAAAAACTAAATATTCCCTCAAAAGGGCTCCCTAGAATTATCAAG 1702
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1703 TTCTTAGTGAAGGTCTACATTTGATTGTACGTAGAATGTTTAAAAGTCAGTTATAAGCCATCTCATCCCATCAT 1776
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1777 AATTTATGATATGTTTAATATATTTTATTTTTTAATTGTCTTTTTAAAAAATTTAGTTTATGACTTTGCAGTAT 1850
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1851 GAATTGTGCTTGTGAAAAAGAACTTTAAATATTTATAAGGGACCATGGGTAATTAATATATATTCAATTTTTAC 1924
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1925 TATGTGTCACTGTCAATAAAATGTAAAATATAATGTGCCAACTAGTGCGCTTTGTTTATGCTGAAAAGAATAAT 1998
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1999 GCTCTGTTAGTATGGTATTTCGTGTCATACTGTCAAGCATTTGTAAACCATCTGAGACTAAGTTAAGCTGAATT 2072
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2073 TATTTATTCAGTGTATGTTGAACATCTCTACACCAACTAGTCAGACATAGTCCTAGGCAATGATGTTACGAGGT 2146
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2147 AAATAAGACATATCCTTATCTTCAGAGAACTTAAAATTTAATGAGGGATAATTTGAGAACCTTTCCATGGATAG 2220
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2221 TATCTAATTTTATTTCATTGGCTGAATGAAAATATTGCATCTTCAGATTAAGAGGTATAAAGTAAATTAATATT 2294
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2295 TGACTGTTCAGTAATCATTACTGACATCTTGTTTTTCACTTTTAAATGCCTCCAATTTACCATAGCACTTTGTT 2368
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2369 AAAATAAATTGTGACTTTTAACTTTTTCATGAACATAACTGCTACATAAATGTTCTTTAGAATTTTAGACATAT 2442
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2443 CTCAGGCACACAAATTATTAGTTCTCACAAATTAGAGAACACTTATAATTGTGAACTCTAAATAGAAACCTTCA 2516
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2517 TTTTAATCACTGAGCAACAGTATATAGAGCAATATTGTTGATCCTGATAAACACTGCATATAAAGAAAAACTGT 2590
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2591 AATATACAATATATACCATCTCAAGTATGCTTAGCTTTGAAAATGATGAAAATAGAAGGCAAAAGTAAGTGAGT 2664
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2665 AATAAAGATGTTATAGTAACTGCAGTAGTGGTACATGTTTCACAAAGATTTTAATAAAAGCACATAAAGCTACA 2738
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2739 ATAAAAGTTCTATATTCCAGTTTCTTATAGTCCAGAAATAGCAGTGATTTGGCATTTGGCAAATTGAAAGTTAC 2812
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2813 CCAGAAAATTCCAATGGCTCAGCATCTTAGCTAGTTTACCATCTCTCTTGTAAATTGTTTTAGAGGATACAAAA 2886
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2887 TGAAAATCTCATTAATCTAAAGTTGCTGCAGATATAGGAAGGACATAAGGATGGAAACAATGAATGTAATTTTT 2960
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2961 TAAAAAACTGATATGCTACAACTATTTTAGGATGGAGAAAGAATTGATTGAGAATTCAAATCCTCACTCACTTA 3034
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3035 CCATAAGGTAGTAATAAAATTAATAATAGTTACTACTATATGATCATTATATTATAAGCAGGTATTACACATAC 3108
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3109 AGAATTTTCAACATTTAATCCTCCCAATAAGCCTATGTGGCAGGTTTTATTATTTCCATTTTATAGATCAGTAA 3182
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3183 ACTGAGGCGTTAAAATGTTATGTAATTTGCCAAAGTTCAAAAAGCTGGTAAGTCTGGTACTAGGATTCAGTACC 3256
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3257 AAGCAGTCTGTTTTAAGACAGATGATTCAAGAGTATGATAGATATTAGAAATACAGATATATCTGCCAGAATAA 3330
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3331 CAATTAAAATGATAGAAAAGGCTCTTACTTGGGACAGCAACCAGGACAGGGATGGTAGAGGGAAGGTCAGAGAC 3404
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3405 TAGAGACTACTCTTTGCTTTTTTTGTTTTCTTTTTTTTTCTTTTAAAGCTATTAACACTACTCAAATTTTAAAC 3478
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3479 TCTGGATACAAATGACTTTGATAAAAGTCCTTAAAACTATTTTGACATTAAATTATTTGGTATTCCACAAACTA 3552
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3553 CAGTAGCTCATACCTATGCAAATATTTAGAAGAAGGAGAAGTACCCTTTTTCTTTGTTTTCATGATCTCCAAAA 3626
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3627 TCTAGTTTTTAGTCTATAAACATCCATCCCTACTCCACATTTTCATGTAAAGATTATGTAGAAGTTGGGCAACA 3700
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3701 GTGTAGTCACAGGATGTCATATAAGTGTGAATAAGCTGAGATTATTGCATTTGTATTTAGCATATTATACAATT 3774
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3775 AAAATGTATTTTATTAAACCTGAAGCAAGTTTTCTTTCATGTCTAGACATCAGTGTGTTACAGAGTTTAATTCA 3848
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3849 TTAAGCTCTGTATTTGAATATAACACCTTGTAAAAATGTTTGAAACTTATCCTCTTGTATGTTAAATATTTAAA 3922
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3923 TATTTGTATATGGCCCTATTCAGCCTGTGCTTTATAAATCACAAAAGAGCTGGGTTTTATATGTTTGTTTTTTA 3996
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3997 TTTCTAAGCTCTCTGCGAAAAAGTTACAAATTGTCTCCTTAAGATATTTTTTCTTTGTAATTTTTTTATATCAT 4070
Query 559 -------------------------------------------------------------------------- 558
Sbjct 4071 GTTGTGATTTCCATAAATATGTGCAGTTACTCTTGATAATACTTGTCTTATTCATTTCAGGTTGCTATAACAAA 4144
Query 559 -------------------------------------------------------------------------- 558
Sbjct 4145 GTACCATAGACTGGGTGGCTTATAAACGACAGAAATTTATTTCTTACAGCTCTGGAGCTGGAAGTCTGAGATCA 4218
Query 559 -------------------------------------------------------------------------- 558
Sbjct 4219 GATTACCAGCATGGTTGGGTTCTGGTGAGAGCCGTCTTGGTTGCAGACTGCCATCTTCTTGTATCCTCACATGG 4292
Query 559 -------------------------------------------------------------------------- 558
Sbjct 4293 CCAAAAGAGGACAAGAGAACTCTCTGGAGTCTGTTTGATAAGAGCATGAATCCCATTACATCTTCACATGGCTC 4366
Query 559 -------------------------------------------------------------------------- 558
Sbjct 4367 CTCCCAAAGACCCCACCTCCTAATATCATCACATGTCATCACATAGGGGGTTAGAATTTCAACATAGAAATTTT 4440
Query 559 -------------------------------------------------------------------------- 558
Sbjct 4441 GGGAGAACACAAACATTCAGTCAGTTGCAATACTTAAGGCAAATTCATCTTGCTTATAACTCTGGTGCATGTGC 4514
Query 559 -------------------------------------------------------------------------- 558
Sbjct 4515 ATTAAAATACTATTGCATTGTAACTGAGTTTGTACCTATTTTCTGCTTTCTGATTATTTCCTTTGTTCATGAAA 4588
Query 559 --------------------------------------------------------------------- 558
Sbjct 4589 ATAAATGACTGGTATTACAAGGTCACCTAAATAAATAGGTTTGTGTACGTCTGCGACTAGAGAGAAATA 4657
