Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04392
• Subject: XM_006527005.3
• Aligned Length: 2007
• Identities: 1184
• Gaps: 657

Alignment

Query    1  ATGGCCATTGTGCAGACTCTGCCAGTGCCACTGGAGCCTGCTCCTGAAGCTGCCACTGCCCCACAAGCTCCAGT  74
            ||||||||||||||.||||||||||||||.||||||||.||.|.|||..|.|||||||||||..||.||||||.
Sbjct    1  ATGGCCATTGTGCACACTCTGCCAGTGCCTCTGGAGCCCGCACGTGAGACAGCCACTGCCCCCAAAACTCCAGC  74

Query   75  CATGGGTAGTGTGAGCAGCCTTATCTCAGGCCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACGGCC  148
            .|||||.||.||||||||.||||||||||||||||||||.||||||||.||.|||||||..||.||.||.||..
Sbjct   75  AATGGGCAGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGCCCCGGGGGACCTGCTCCTCAACGACATCATGGTG  148

Query  149  CTCCTGGGCCCACCTTCTTCCGCCAGCAGGATGGCCTGCTACGGGGTGGCTATGAGGCACAGGAGCCGCTGTGC  222
            ..||||||||||||||||||||||||||||||||.|||||||.|||||||||.|||||||||||.|||||.|||
Sbjct  149  TCCCTGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCTACCGGGTGGCTACGAGGCACAGGAACCGCTCTGC  222

Query  223  CCAGCTGTGCCCCCTAGGAAGGCTGTCCCTGTCACCAGCTTCACCTACATCAATGAGGACTTCCGGACAGAGTC  296
            ||.||||||||.||.||||||||||||||.|.||..|||||.|||||..|||||||||||||||||||||||||
Sbjct  223  CCGGCTGTGCCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACCTATGTCAATGAGGACTTCCGGACAGAGTC  296

Query  297  ACCCCCCAGCCCAAGCAGTGATGTTGAGGATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCAC  370
            .||.||||||||.||||||||||||||.|||.||||.||.||.|.|||||||||||||||||||||.||.||.|
Sbjct  297  TCCTCCCAGCCCCAGCAGTGATGTTGAAGATCCCCGGGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCC  370

Query  371  CACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGAACATGGAGAAGATCCTGATCCGCCCAACAGCCTTC  444
            ||||||||||||||||||||||||||||||||||||||                              ||.|||
Sbjct  371  CACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAG------------------------------GCATTC  414

Query  445  AAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCCCTGCCTAGCTTCATGGGTCCTCGGGCCACCGGGCTGTC  518
                                    ||||                                              
Sbjct  415  ------------------------GGGG----------------------------------------------  418

Query  519  TGGGAGCCAGGGCAGCCTGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCTTCCTCCTCCTCTTCAG  592
                   ||.||||||                  |||.|||.|                               
Sbjct  419  -------CACGGCAGC------------------GGCGCTGGC-------------------------------  436

Query  593  CTGCTGACAAACCCCTGGCATTTAGTGGCTGGGCCAGTGGCTGCCCATCAGGGACGCTATCCGACTCTGGCCGA  666
                                                                                      
Sbjct  437  --------------------------------------------------------------------------  436

Query  667  AACTCACTGTCCAGCCTGCCCACCTACAGCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCAGGCGGGCACCT  740
                                         |||.|||                                      
Sbjct  437  -----------------------------CACGGGA--------------------------------------  443

Query  741  GCCTTCCCATGGCTCTGGGCGAGGGGCACTGCCTGGGCCAGCCCGAGGGGTCCCTACTGGGCCCTCCCACTCAG  814
                              |||||||                   ||||                          
Sbjct  444  ------------------GCGAGGG-------------------GAGG--------------------------  454

Query  815  ACAGTGGCCGGTCCTCCTCCAGCAAGAGCACAGGCTCCCTAGGGGGCCGTGTGGCTGGGGGGCTTTTGGGCAGT  888
                                                                                      
Sbjct  455  --------------------------------------------------------------------------  454

Query  889  GGTACTCGGGCCTCCCCTGACAGCAGCTCCTGTGGGGAGCGCTCACCACCACCCCCGCCTCCACCTCCTTCGGA  962
                                                                                      
Sbjct  455  --------------------------------------------------------------------------  454

Query  963  TGAGGCCCTGCTGCACTGTGTCCTGGAAGGAAAGCTCCGAGACCGGGAGGCAGAGCTTCAGCAGCTGCGGGACA  1036
                          ||||||                                      ||||            
Sbjct  455  --------------ACTGTG--------------------------------------CAGC------------  464

Query 1037  GTCTGGACGAGAATGAGGCTACCATGTGCCAGGCATACGAGGAGCGGCAGCGGCACTGGCAGCGAGAGCGTGAG  1110
                                        ||||||            |||||                     ||
Sbjct  465  ----------------------------CCAGGC------------GCAGC---------------------AG  477

Query 1111  GCCCTGCGAGAGGACTGTGCGGCCCAGGCACAGCGGGCACAGCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTT  1184
            |||                        .|.|||||.|..|||||||||||||||||||||||||||||||||||
Sbjct  478  GCC------------------------ACGCAGCGCGTCCAGCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTT  527

Query 1185  CCAGCTGCAGCAGGAGAAGCGGCAATTGCAGGACGACTTCGCACAGCTGCTGCAGGAGCGCGAACAGCTGGAGC  1258
            ||||||||||||.||||||||.||.||||||||.|||||.||.||||||||.||||||||.|||||||||||||
Sbjct  528  CCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCGGGAACAGCTGGAGC  601

Query 1259  GGCGCTGCGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCCGAGGCTTGAGGAGACCAAGTGGGAGGTGTGC  1332
            |.|||||.|||||.||.||.||||||||||||||.||||||||..||||.|||||||||||.|||||||||||.
Sbjct  602  GCCGCTGTGCCACTTTTGAACGGGAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGACCAAATGGGAGGTGTGT  675

Query 1333  CAGAAATCAGGCGAGATCTCCCTGCTGAAGCAGCAGCTGAAAGAGTCTCAGGCAGAGCTGGTGCAGAAGGGCAG  1406
            |||||||||||.|||||||||||||||||||||||.|||||.||.|||||||||||||||||.|||||||||||
Sbjct  676  CAGAAATCAGGTGAGATCTCCCTGCTGAAGCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAGGGCAG  749

Query 1407  CGAGCTGGTGGCTCTGCGGGTGGCGCTGCGGGAGGCCCGTGCTACGCTGCGGGTCAGTGAGGGCCGTGCGCGGG  1480
            .|||||||||||.|||||||||||.||.||.||||||||.||.||..||||||||||||||||||||||..|||
Sbjct  750  TGAGCTGGTGGCGCTGCGGGTGGCCCTCCGTGAGGCCCGGGCCACCTTGCGGGTCAGTGAGGGCCGTGCCAGGG  823

Query 1481  GTCTACAGGAGGCCGCCCGAGCTCGGGAGCTGGAGCTGGAAGCCTGTTCCCAGGAGCTGCAGCGACACCGCCAG  1554
            |.||.||||||||.||||||||||||||||.|||||||||.|||||.||.||||||||.|||||..||||||||
Sbjct  824  GCCTGCAGGAGGCAGCCCGAGCTCGGGAGCAGGAGCTGGAGGCCTGCTCGCAGGAGCTTCAGCGGTACCGCCAG  897

Query 1555  GAAGCTGAGCAGCTGCGGGAGAAAGCTGGGCAGTTGGATGCTGAGGCGGCCGGACTCCGGGAGCCCCCTGTGCC  1628
            ||.|||||||.|||.||||||||.||.|||||.||||||||.||.||..|.|||||||||||.||||||||.||
Sbjct  898  GAGGCTGAGCGGCTCCGGGAGAAGGCCGGGCATTTGGATGCCGAAGCATCGGGACTCCGGGATCCCCCTGTACC  971

Query 1629  ACCTGCCACCGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTG  1702
            .|||||||||.|.|||||.|||||||||||||||||||||||||||||.||||||||||||||.||.||||..|
Sbjct  972  CCCTGCCACCACCGACCCGTTCCTCCTGGCAGAGAGTGATGAGGCCAAGGTGCAGCGGGCAGCGGCTGGGGCAG  1045

Query 1703  GGGGCAGCTTGCGGGCCCAGGTGGAGCGATTGCGGGTGGAGCTGCAGCGGGAGCGGCGGCGGGGTGAGGAGCAG  1776
            ||||.|||.|||||||.||||||||.||..||||....||.|||||||||||||.||||||.||.||.|||||.
Sbjct 1046  GGGGTAGCCTGCGGGCTCAGGTGGAACGGCTGCGCCAAGAACTGCAGCGGGAGCAGCGGCGAGGGGACGAGCAA  1119

Query 1777  CGGGACAGCTTTGAGGGGGAGCGGCTGGCCTGGCAGGCAGAGAAGGAGCAGGTGATCCGCTACCAGAAGCAGCT  1850
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1120  CGGGACAGCTTTGAGGGGGAGCGGCTGGCCTGGCAGGCAGAGAAGGAACAGGTGATCCGCTACCAGAAGCAGCT  1193

Query 1851  GCAGCACAACTACATCCAGATGTACCGGCGCAACCGGCAGCTAGAGCAGGAGCTGCAGCAGCTCAGCCTGGAGC  1924
            ||||||||||||.|||||||||||||||||.|||||||||||.||||||||.||||||||.||.||||||||||
Sbjct 1194  GCAGCACAACTATATCCAGATGTACCGGCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACTGAGCCTGGAGC  1267

Query 1925  TGGAGGCCCGGGAGCTCGCTGACCTGGGCCTGGCCGAGCAGGCCCCCTGCATCTGCCTGGAGGAGATCACTGCT  1998
            ||||||||||.|||||.||.||..||||||||||.|||..||||||.||||||||.|||||||||||||||||.
Sbjct 1268  TGGAGGCCCGCGAGCTTGCGGATTTGGGCCTGGCGGAGTCGGCCCCTTGCATCTGTCTGGAGGAGATCACTGCC  1341

Query 1999  ACTGAGATC  2007
            |||||||||
Sbjct 1342  ACTGAGATC  1350