Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04417
Subject:
NM_001142466.3
Aligned Length:
1569
Identities:
1269
Gaps:
300

Alignment

Query    1  ATGCAGCGGGCGGCGGCGCTGGTCCGGCGGGGCTGTGGTCCCCGGACCCCCAGCTCCTGGGGCCGCAGCCAGAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CAGCGCGGCCGCCGAGGCCTCGGCGGTGCTCAAGGTGCGGCCCGAGCGCAGCCGGCGCGAGCGCATCCTCACGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGGAGTCCATGAACCCGCAGGTGAAGGCGGTGGAGTACGCCGTGCGGGGACCCATCGTGCTCAAGGCCGGCGAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  ATCGAGCTCGAGCTGCAGCGGGGTATCAAAAAGCCATTCACAGAGGTCATCCGAGCCAACATCGGGGACGCCCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGCTATGGGGCAGCAGCCAATCACCTTCCTCCGGCAGGTGATGGCACTATGCACCTACCCAAACCTGCTGGACA  370
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ----ATGGGGCAGCAGCCAATCACCTTCCTCCGGCAGGTGATGGCACTATGCACCTACCCAAACCTGCTGGACA  70

Query  371  GCCCCAGCTTCCCAGAAGATGCTAAGAAACGTGCCCGGCGGATCCTGCAGGCTTGTGGCGGGAACAGCCTGGGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   71  GCCCCAGCTTCCCAGAAGATGCTAAGAAACGTGCCCGGCGGATCCTGCAGGCTTGTGGCGGGAACAGCCTGGGG  144

Query  445  TCCTACAGTGCTAGCCAGGGTGTCAACTGCATCCGTGAAGATGTGGCTGCCTACATCACCAGGAGGGATGGCGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  145  TCCTACAGTGCTAGCCAGGGTGTCAACTGCATCCGTGAAGATGTGGCTGCCTACATCACCAGGAGGGATGGCGG  218

Query  519  TGTGCCTGCGGACCCCGACAACATCTACCTGACCACGGGAGCTAGTGACGGCATTTCTACGATCCTGAAGATCC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  219  TGTGCCTGCGGACCCCGACAACATCTACCTGACCACGGGAGCTAGTGACGGCATTTCTACGATCCTGAAGATCC  292

Query  593  TCGTCTCCGGGGGCGGCAAGTCACGGACAGGTGTGATGATCCCCATCCCACAATATCCCCTCTATTCAGCTGTC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  293  TCGTCTCCGGGGGCGGCAAGTCACGGACAGGTGTGATGATCCCCATCCCACAATATCCCCTCTATTCAGCTGTC  366

Query  667  ATCTCTGAGCTCGACGCCATCCAGGTGAATTACTACCTGGACGAGGAGAACTGCTGGGCGCTGAATGTGAATGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  367  ATCTCTGAGCTCGACGCCATCCAGGTGAATTACTACCTGGACGAGGAGAACTGCTGGGCGCTGAATGTGAATGA  440

Query  741  GCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCCTAAGGTGCTCTGCATAATCAACCCTGGGAACC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  441  GCTCCGGCGGGCGGTGCAGGAGGCCAAAGACCACTGTGATCCTAAGGTGCTCTGCATAATCAACCCTGGGAACC  514

Query  815  CCACAGGCCAGGTACAAAGCAGAAAGTGCATAGAAGATGTGATCCACTTTGCCTGGGAAGAGAAGCTCTTTCTC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  515  CCACAGGCCAGGTACAAAGCAGAAAGTGCATAGAAGATGTGATCCACTTTGCCTGGGAAGAGAAGCTCTTTCTC  588

Query  889  CTGGCTGATGAGGTGTACCAGGACAACGTGTACTCTCCAGATTGCAGATTCCACTCCTTCAAGAAGGTGCTGTA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  589  CTGGCTGATGAGGTGTACCAGGACAACGTGTACTCTCCAGATTGCAGATTCCACTCCTTCAAGAAGGTGCTGTA  662

Query  963  CGAGATGGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCTCCTTCCACTCCACCTCCAAGGGCTACATGGGCG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  663  CGAGATGGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCTCCTTCCACTCCACCTCCAAGGGCTACATGGGCG  736

Query 1037  AGTGTGGTTACAGAGGAGGCTACATGGAGGTGATCAACCTGCACCCTGAGATCAAGGGCCAGCTGGTGAAGCTG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  737  AGTGTGGTTACAGAGGAGGCTACATGGAGGTGATCAACCTGCACCCTGAGATCAAGGGCCAGCTGGTGAAGCTG  810

Query 1111  CTGTCGGTGCGCCTGTGCCCCCCAGTGTCTGGGCAGGCCGCCATGGACATTGTCGTGAACCCCCCGGTGGCAGG  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  CTGTCGGTGCGCCTGTGCCCCCCAGTGTCTGGGCAGGCCGCCATGGACATTGTCGTGAACCCCCCGGTGGCAGG  884

Query 1185  AGAGGAGTCCTTTGAGCAATTCAGCCGAGAGAAGGAGTCGGTCCTGGGTAATCTGGCCAAAAAAGCAAAGCTGA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  AGAGGAGTCCTTTGAGCAATTCAGCCGAGAGAAGGAGTCGGTCCTGGGTAATCTGGCCAAAAAAGCAAAGCTGA  958

Query 1259  CGGAAGACCTGTTTAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGGCCATGTACGCCTTCCCTCGG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  CGGAAGACCTGTTTAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGGCCATGTACGCCTTCCCTCGG  1032

Query 1333  ATCTTCATTCCTGCCAAAGCTGTGGAGGCTGCTCAGGCCCATCAAATGGCTCCAGACATGTTCTACTGCATGAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  ATCTTCATTCCTGCCAAAGCTGTGGAGGCTGCTCAGGCCCATCAAATGGCTCCAGACATGTTCTACTGCATGAA  1106

Query 1407  GCTCCTGGAGGAGACTGGCATCTGTGTCGTGCCCGGCAGTGGCTTTGGGCAGAGGGAAGGCACTTACCACTTCA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107  GCTCCTGGAGGAGACTGGCATCTGTGTCGTGCCCGGCAGTGGCTTTGGGCAGAGGGAAGGCACTTACCACTTCA  1180

Query 1481  GGATGACTATCCTCCCTCCAGTGGAGAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181  GGATGACTATCCTCCCTCCAGTGGAGAAGCTGAAAACGGTGCTGCAGAAGGTGAAAGACTTCCACATCAACTTC  1254

Query 1555  CTGGAGAAGTACGCG  1569
            |||||||||||||||
Sbjct 1255  CTGGAGAAGTACGCG  1269

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